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Heatmap: Cluster_262 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.47 -1.81 -0.44 -1.11 0.01 0.61 0.21 -0.74 -2.88 -0.36 0.03 -0.72 0.79 0.62 -0.55 -0.07
0.42 -0.2 -0.39 -0.59 0.0 0.19 0.11 -0.81 -0.51 -0.19 0.3 -0.06 0.33 0.3 0.12 0.29
0.71 -2.13 -0.3 -0.91 0.74 0.67 -0.28 -0.41 -1.43 -0.9 0.77 0.18 0.22 -0.23 -0.22 0.42
0.08 -0.73 -0.72 -0.93 -0.74 -0.29 0.37 -0.22 -0.31 -0.1 -0.14 -0.42 0.72 0.58 0.64 0.63
-0.04 -1.51 -0.95 -3.49 -0.82 -1.53 -1.08 -1.24 - - -1.15 -1.67 1.93 1.43 1.39 1.24
0.38 -0.47 -1.04 -1.15 -0.56 0.19 0.4 -0.97 -0.53 -0.11 0.52 0.16 0.46 0.43 -0.02 0.6
0.22 -1.01 -0.72 -1.21 -0.32 -0.38 -0.07 -1.0 -0.99 -0.86 -0.5 -0.48 0.92 1.27 1.16 0.34
-0.39 -1.72 -2.15 -1.71 -1.52 -0.74 -0.17 -0.62 -1.23 -1.03 -0.84 -1.06 1.08 1.25 1.71 1.14
0.7 -1.23 -0.91 -1.7 -0.56 -0.36 -0.49 -1.03 -2.18 -1.95 0.17 -0.9 1.42 0.9 0.54 1.21
0.39 -1.41 -0.45 -0.62 -0.17 0.44 -0.03 -0.77 -0.59 -0.35 -0.14 -0.16 0.95 0.1 0.45 0.58
-0.3 -1.83 -0.82 -0.54 -0.42 -0.1 -0.31 -0.55 -0.73 -0.83 -0.35 -0.83 1.33 0.97 0.17 1.25
0.81 -1.44 -1.05 -0.96 0.27 0.45 -0.29 -0.74 -0.8 -0.77 0.56 -0.63 0.62 0.72 -0.15 0.63
0.53 -1.22 -0.6 -0.65 -0.31 0.36 0.21 -0.65 -1.16 -0.42 0.4 -0.05 0.86 0.23 -0.02 0.59
-0.12 -0.94 -1.4 -1.8 -0.65 -0.48 -0.43 -0.44 -1.44 -1.59 -0.76 -1.53 1.8 1.16 0.51 1.18
0.44 -0.82 -0.84 -0.42 -0.15 0.35 0.37 -0.88 -0.82 -0.75 0.39 0.03 0.44 0.28 0.21 0.63
0.53 -2.4 -0.71 -0.74 -0.17 0.7 -0.08 -1.31 -2.22 -0.35 0.89 -0.38 1.18 0.39 -0.1 0.25
0.79 -1.49 -0.63 -0.65 0.42 0.34 0.7 -1.09 -1.94 -2.16 0.55 -0.98 0.99 0.23 -0.15 0.51
0.46 -1.46 -0.79 -1.75 0.15 0.65 -0.34 -0.74 -1.86 -1.51 -0.16 -1.42 1.3 0.82 0.33 0.96
0.56 -0.88 -0.35 -0.26 0.22 0.34 0.05 -0.51 -0.8 -0.39 -0.12 -0.89 0.77 0.46 -0.01 0.4
0.29 -2.24 -1.17 -0.75 -0.01 0.3 0.17 -1.16 -1.36 -0.49 0.69 -0.29 0.84 0.27 -0.08 1.17
1.06 -0.25 -0.89 -1.2 0.05 0.2 0.38 -0.3 0.0 -0.22 0.68 0.01 0.07 -0.22 -0.93 -0.16
1.06 -3.4 -0.44 -0.5 -0.47 -0.16 0.23 -0.39 -1.93 -1.61 -0.25 -1.68 1.4 0.94 0.64 -0.04
0.17 -4.05 -0.28 -1.39 0.49 0.27 0.12 -0.33 -1.16 -0.28 0.01 -0.6 0.8 0.4 0.78 0.48
0.51 -0.46 -0.66 -0.56 -0.09 0.09 -0.38 -0.84 -1.18 -0.43 -0.41 -0.67 0.86 0.83 0.02 1.02
-0.18 -0.7 -0.8 -1.82 -0.11 -0.67 -0.43 -1.33 -3.59 - -0.74 -1.2 1.86 1.08 0.54 1.39
0.29 -0.63 -1.53 -1.57 -0.55 0.05 0.35 -1.38 -1.7 -1.06 -0.33 0.06 1.23 0.76 -0.64 1.46
-0.81 -2.61 -2.97 -2.46 -1.52 -1.83 -1.51 -0.72 -1.68 -2.52 -1.2 -2.81 1.98 1.57 1.61 1.21
0.57 -0.82 -0.66 -0.46 -0.27 0.37 0.12 -0.86 -1.06 -0.39 0.57 -0.21 0.59 0.42 0.22 0.31
0.3 -0.49 -0.96 -0.42 -0.44 -0.12 0.54 -0.93 -0.78 -0.33 0.34 -0.06 0.41 0.16 0.45 0.79
0.09 -1.56 -0.75 -1.18 -0.64 0.09 -0.45 -1.28 -1.97 -0.54 0.37 -0.18 1.24 0.77 0.54 1.05
0.47 -0.69 -0.62 -0.28 -0.06 0.06 -0.29 -0.69 -0.38 -0.37 0.05 -0.26 0.91 0.24 0.16 0.57
0.56 -1.04 -0.38 -0.52 0.31 1.05 -0.38 -1.84 -2.09 -0.25 0.63 -1.24 0.76 0.25 -0.47 0.65
-0.52 -1.21 -1.88 -2.55 -0.74 -0.75 -0.81 -1.02 -1.9 -1.52 -1.0 -2.33 1.88 1.29 0.75 1.61
1.27 -0.29 -0.68 -1.03 0.23 0.41 0.23 -0.5 -0.08 -0.73 0.63 0.24 -0.41 -0.34 -0.71 -0.23
-2.81 - -3.35 - -3.44 -3.86 -2.92 -6.82 - - -4.47 -3.26 1.37 2.46 2.09 1.56
0.33 -1.68 -0.27 -0.57 0.05 0.52 0.09 -1.1 -1.33 -0.69 0.57 -0.11 0.84 0.16 0.08 0.62
0.69 -4.21 -0.97 -1.34 -0.41 -0.01 -0.35 -0.77 -1.2 -2.24 -0.15 -1.03 1.56 0.35 -0.46 1.73
0.58 -0.4 0.08 0.2 0.31 0.55 0.13 -0.48 -0.39 -0.52 0.25 -0.44 0.26 -0.17 -0.76 -0.04
0.72 -0.25 -1.11 -0.86 -0.1 -0.04 0.51 -0.78 -0.8 -1.17 -1.0 -0.43 0.85 0.72 0.32 0.7
0.33 -1.03 -0.88 -1.04 -0.1 0.51 0.02 -0.95 -1.16 -0.1 0.41 -0.14 0.67 0.33 0.4 0.64
0.92 -0.82 -1.45 -1.27 0.46 0.19 0.21 -1.4 -2.08 -1.27 -0.26 -0.01 0.43 0.6 0.26 1.12
0.39 -1.32 -0.01 -0.3 0.34 0.65 -0.06 -0.97 -1.98 -0.76 0.05 -0.6 0.83 0.41 0.04 0.61
0.53 -0.73 -0.24 -0.17 0.11 0.56 0.61 -0.96 -0.89 -0.26 0.64 -0.08 0.1 -0.2 -0.62 0.19
1.14 -0.92 -0.63 -0.48 -0.0 0.38 0.23 -1.14 -0.97 0.13 0.68 -0.05 -0.05 0.02 -0.28 0.0
-0.13 -2.56 -1.23 -1.0 -0.77 -0.47 -0.17 -0.11 -0.79 -0.77 -0.6 -0.84 1.61 1.16 0.22 1.03
0.21 -1.69 -0.48 -0.46 -0.05 0.32 0.21 -0.72 -0.66 -0.64 0.04 -0.68 1.14 0.44 0.07 0.65
1.14 -0.36 -1.11 -1.01 0.3 0.52 0.2 -0.98 -0.73 -0.61 1.0 -0.22 0.07 -0.55 -0.34 0.14
0.94 -2.49 -0.9 -0.99 -0.05 -0.05 -0.16 -0.28 -0.68 -2.02 -0.06 -2.32 1.39 0.34 -0.17 1.26
0.38 -0.91 -0.55 -0.71 0.05 0.06 0.28 -0.56 -0.62 -0.48 -0.21 -0.83 0.98 0.62 0.32 0.44
0.88 -0.25 -0.56 -0.1 0.12 0.29 0.09 -0.3 -0.12 -0.37 0.64 -0.11 0.1 -0.88 -0.73 0.18
0.37 -1.06 -0.38 -0.65 0.23 0.54 -0.03 -1.15 -0.87 0.35 0.54 -0.37 0.66 0.22 -0.27 0.18
0.25 -0.67 -1.05 -1.39 -0.44 -0.13 0.24 -0.94 -1.3 -0.56 -0.19 -0.14 0.75 0.9 0.97 0.67
0.47 -0.63 -1.96 -2.31 -0.14 -0.05 -0.06 -0.53 -1.14 -1.1 -0.72 -0.64 0.92 0.81 0.77 1.3
0.73 -0.81 -2.43 -1.51 0.51 -0.0 -0.19 -0.47 -2.85 - -0.44 -2.87 1.48 0.56 -0.54 1.69
0.92 -1.58 0.06 -0.45 0.34 0.47 0.59 -0.77 -1.08 -0.8 0.19 0.14 0.01 -0.02 -0.1 0.07
1.08 -1.73 -0.55 -0.22 0.39 0.32 0.28 -0.12 -1.12 -1.53 -0.01 -1.3 0.98 -0.21 -0.38 0.61
1.03 -0.57 -0.38 -0.63 0.79 1.12 -1.17 -1.07 -0.94 -1.02 0.78 -0.5 0.76 -0.56 -2.07 -0.0
0.96 -0.9 -0.11 0.04 0.25 0.76 -0.42 -0.85 -0.22 -0.04 0.18 -0.46 0.3 -0.34 -0.38 -0.15
0.53 -0.44 -1.12 -0.92 -0.23 0.58 -0.08 -0.87 -0.76 0.14 0.44 0.02 0.04 0.37 0.12 0.61
0.2 -4.35 -2.12 -2.12 -0.47 -0.39 -0.79 -0.52 -1.11 -2.1 -0.49 -1.2 1.51 1.17 0.54 1.67
0.64 -1.48 -0.39 -0.99 -0.05 0.45 -0.11 -1.05 -0.89 -0.49 0.24 -0.09 0.7 0.49 0.4 0.43
0.84 -1.35 -0.17 -0.4 0.3 0.63 0.04 -0.93 -0.89 0.06 0.34 -0.16 0.17 0.09 -0.01 -0.13
0.81 -1.68 -1.03 -1.44 -0.13 -0.35 -0.29 -1.07 -1.4 -1.92 -0.2 -1.64 1.38 0.71 0.23 1.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.