Heatmap: Cluster_118 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - 1.28 1.36 2.89 0.32 0.86 - - - -3.43 - - - -1.22 -
-3.2 -8.27 0.14 -0.57 3.43 1.04 -3.0 -6.65 -5.69 -6.05 -1.22 -0.79 - -4.87 -4.8 -
-4.19 - -3.28 -2.94 3.71 -2.31 -3.95 -3.61 - - 0.56 -0.39 - - - -
-1.8 - -1.0 - 3.54 1.2 - - - - -0.92 -0.44 - - - -
- - 1.02 -0.01 2.73 0.04 -0.59 -2.07 - - -2.85 0.51 - -0.11 0.97 -
- - 1.65 1.23 3.22 -4.34 0.04 -5.7 - - -4.96 -3.74 - - - -
-1.49 -3.43 -0.01 0.23 1.08 -0.17 0.74 0.21 -1.3 -1.26 0.26 -0.87 0.7 0.92 - 0.57
- -3.73 -0.39 0.29 3.39 -0.62 - - -1.49 1.2 -5.57 -3.09 - - - -
-3.76 -7.1 0.84 -0.12 2.63 0.15 -4.39 -2.47 -2.48 -0.84 -1.85 0.65 -0.52 0.15 -1.05 -0.28
-4.04 -0.33 -4.26 -3.19 3.51 1.53 -2.93 -3.21 - - -2.86 -4.29 - -5.03 -1.96 -
-6.62 - 1.1 0.82 2.5 1.8 1.49 -6.37 - - -5.94 -3.73 - - -5.73 -
-2.35 -1.56 0.21 -0.79 2.56 -0.02 -1.25 -0.22 -1.67 -1.4 0.11 1.27 -1.74 -1.18 -1.74 -1.51
- - 1.55 1.19 3.1 0.29 -5.69 -5.49 -2.08 -0.74 -6.94 -5.46 -5.69 -5.2 - -5.81
- - -0.75 - 3.87 -1.79 - - - - -1.08 - - - - -
- - 0.98 0.43 2.85 0.85 -0.12 -9.84 - - -1.06 1.19 - - - -
- - - 0.44 2.53 0.08 - - - - - - - - 2.97 -
-7.89 - -1.03 -0.59 3.29 1.41 -0.56 -9.15 -1.78 -3.39 -0.07 -1.36 - -7.29 - -
-0.3 -1.35 -2.39 -1.4 2.34 0.54 -0.29 -0.66 -0.74 -1.0 0.74 -0.17 -0.36 -0.97 -1.1 -0.27
-4.38 -6.53 1.21 0.52 2.89 0.53 0.15 -2.82 -1.82 -2.61 -0.48 -0.91 -3.18 -3.02 -3.75 -4.23
-1.89 -6.84 0.3 1.15 3.39 -0.04 -0.78 -9.53 -4.71 - -4.4 -4.5 - - -2.98 -
- - 1.28 0.69 3.28 -1.24 0.72 -7.67 -6.03 - -5.93 -4.45 -4.69 - -3.71 -
- - 0.53 0.37 2.0 1.14 1.22 -2.3 -1.52 -0.88 0.16 1.33 - - - -
- - 0.13 -1.45 3.64 1.08 - - - - - - - - - -
-5.73 - 0.38 0.73 2.69 0.63 1.55 -1.16 - - -0.39 -0.94 - - -1.48 -
- - - - 4.0 - - - - - - - - - - -
- - -1.71 0.03 2.98 0.37 0.62 -1.7 - - -1.05 -0.15 - - 1.17 -
- - - - 3.12 1.38 - - - - - - - 2.23 - -
1.01 -5.91 1.27 1.08 2.6 1.04 0.29 -7.87 - - -4.83 -3.61 - - - -
- -4.03 -2.46 -2.13 3.74 0.75 -1.13 - - - - - - - - -
- - -0.16 - 3.64 -0.67 -2.88 - - - -1.55 0.62 - - - -
-8.39 -4.39 0.38 0.62 3.09 0.63 -1.67 -2.4 -0.22 -0.61 -2.24 -0.34 - -10.23 - -
- -0.48 -3.42 -2.09 3.05 1.19 -0.18 - - - 1.49 -0.54 - - - -
-6.32 -2.39 -0.09 -1.19 1.28 -2.11 -2.05 -0.92 -5.57 -4.93 -1.46 -0.61 2.45 0.48 0.9 0.27
-6.62 -5.7 0.64 0.96 2.44 1.14 -0.42 -2.18 -2.85 -1.45 -2.07 -3.9 -1.63 -2.51 1.28 -3.09
- - 0.17 1.08 2.69 1.06 1.61 -7.48 - - -1.0 -2.69 - - -0.94 -
- -5.01 0.07 1.22 3.07 1.24 0.88 -5.28 - - - - - - - -
-1.98 -3.26 0.16 -1.1 3.18 0.73 -3.66 -4.9 - - -1.84 0.96 -2.98 -1.68 -1.2 -2.78
- -2.73 -1.82 -1.03 3.81 -1.84 -2.49 - - - -2.17 - - -4.0 -1.93 -
- - 1.33 -0.46 3.45 0.59 - - - -1.74 - - - - - -
- - - 1.46 3.17 2.1 - - - - - - - - - -
- - 0.08 -1.17 3.52 0.05 -0.6 - - - - - 0.4 - - -
- - 0.86 1.2 3.5 -0.75 - - - - - - - - - -
-4.3 -3.45 -3.96 - 2.94 0.21 -0.79 -2.8 - - 1.1 -1.0 0.28 -0.82 -1.07 0.41
- -5.65 1.57 -0.62 3.46 -0.83 - -6.77 - - -4.45 - -3.2 -2.3 -1.23 -
-1.1 -1.14 -0.96 0.89 1.72 0.52 1.39 0.27 -3.2 -0.55 0.8 -0.04 - -0.63 - -
-3.89 -3.51 -0.4 -1.54 2.85 0.31 0.75 -1.25 - - -2.73 -2.83 -1.32 -2.26 1.49 -1.03
- - 1.2 1.63 2.57 1.6 0.73 -8.58 - - - - - - - -
-3.65 -2.69 1.86 0.1 2.72 -0.27 -1.1 -1.63 - - -0.04 0.85 - -3.52 - -
- - 0.37 0.42 2.8 0.34 1.6 - - - -2.42 0.93 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.