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Heatmap: Cluster_164 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.42 -0.44 -0.6 -0.34 -0.88 -0.85 0.07 0.24 1.2 1.14 0.63 0.45 -0.97 -0.95 -0.98 -0.38
-0.45 -0.47 -1.24 -0.41 -1.11 -0.3 -0.16 -0.39 1.62 1.14 0.73 0.3 -0.55 -1.1 -1.6 -0.36
-7.38 -0.91 -0.77 0.21 -1.16 -0.58 0.01 -2.26 2.5 1.85 0.16 -0.01 -6.67 - - -6.21
-2.02 -1.46 0.14 -0.04 0.2 -0.59 -0.48 0.06 1.45 1.16 0.43 0.4 -0.82 -1.21 -1.55 -0.38
-1.11 -2.73 -0.36 0.04 -2.11 -1.47 -0.59 -0.67 1.35 1.11 0.5 0.41 -0.2 -0.2 -0.43 0.81
- - 0.15 -0.52 -1.72 - - -0.95 2.81 2.11 - - - - 1.04 -
-0.55 -0.61 -0.52 0.19 -0.39 -0.3 0.3 0.0 1.32 1.57 0.82 0.33 -2.89 -3.13 -3.37 -2.51
-1.56 -0.13 0.2 0.42 0.17 -1.13 -0.84 0.3 1.69 1.5 0.47 -0.5 -1.94 -2.08 -3.72 -2.63
-3.83 -0.98 -1.19 -1.75 -1.5 -0.9 -0.9 -0.06 2.06 1.86 1.17 0.57 -2.96 -2.36 -2.11 -2.06
-0.08 -0.99 -1.14 -0.2 -0.94 -0.29 -0.42 0.24 1.7 1.08 0.33 0.2 -1.1 -0.94 -1.05 -0.51
-2.5 -1.26 -1.79 -1.25 -0.14 -1.36 0.57 -0.54 1.74 1.63 0.69 0.82 -1.12 -1.45 -2.65 -1.22
-1.0 -1.38 -1.48 -1.84 -1.44 -1.96 -0.9 0.32 1.63 1.64 1.21 1.12 -0.89 -2.09 -2.87 -1.06
-0.91 -2.05 -2.06 -1.56 -1.55 -1.73 -0.08 0.58 1.77 1.21 1.3 0.96 -1.12 -1.56 -2.12 -1.28
-4.35 -2.19 -0.04 -1.16 -0.97 -0.94 -1.7 0.59 2.47 2.03 -0.5 0.11 - -7.13 -5.06 -
-1.82 -1.9 -0.09 -1.33 -1.75 -2.68 -2.71 0.52 2.25 2.14 0.3 0.54 -3.87 -4.75 -5.48 -3.41
- - - - -0.93 -1.71 -0.7 -0.89 2.17 2.15 1.39 1.29 - - - -
- - -2.94 -4.08 -5.05 - -1.81 -0.76 2.25 2.26 1.59 1.23 - - - -
- -3.22 -1.67 -1.93 -4.13 -2.71 -3.81 -1.06 1.97 0.57 -0.27 0.35 - -3.45 2.8 -
-6.06 -1.0 -0.14 0.23 - -1.61 -3.14 -3.4 2.3 1.9 0.64 -2.13 -0.77 -1.87 0.2 -1.16
-2.71 -2.76 -3.78 -2.89 -2.5 -1.84 0.17 -1.03 1.73 2.27 1.47 1.28 -5.33 -5.86 -6.02 -5.15
-2.77 -4.86 -1.4 -0.65 0.13 -0.5 - - 2.07 2.05 1.66 0.47 -3.89 - - -4.02
-5.2 -1.73 -1.68 -3.67 -1.17 -1.58 0.05 -1.57 1.86 1.63 1.17 1.23 -2.5 -0.73 -1.53 -0.51
- -3.67 -2.26 -1.2 -2.72 0.74 -6.11 -0.95 2.28 2.01 1.42 0.45 - - - -
-0.55 -1.21 -0.46 -0.02 -0.63 -0.26 0.41 -0.18 1.11 1.38 0.91 0.04 -0.74 -1.44 -1.76 -0.89
-4.97 -2.73 -0.33 -1.8 -2.42 0.69 -2.22 -1.16 2.45 1.64 1.36 -0.56 - - -1.25 -
-6.9 -3.22 -0.51 0.14 -0.66 0.17 -3.16 -1.29 2.0 1.79 1.71 -0.3 -4.43 -4.66 -3.46 -3.56
-2.39 -2.95 -0.81 0.19 -0.68 -1.51 -0.89 -2.65 2.71 1.89 0.07 -1.17 -3.42 -4.63 -1.54 -3.59
- - - - - - -2.25 - 2.51 1.91 1.74 -0.96 - - 1.3 -
0.12 -0.21 -0.41 0.04 -9.53 -8.68 - - 2.7 1.65 0.95 -0.61 - - -5.77 -6.87
- - - - -0.77 -1.96 -0.2 -0.15 1.79 1.41 1.59 -0.93 0.48 -0.62 - 0.77
- - - - - - - -1.5 2.55 2.48 1.81 -0.52 - - - -
-3.49 -0.01 -0.82 -0.5 -1.0 -0.01 0.12 -0.27 1.82 1.73 0.57 0.82 -4.52 -5.53 -6.09 -4.28
-0.77 -1.59 -1.2 -1.04 -1.51 -0.78 0.32 -0.4 1.3 1.07 0.51 0.33 0.12 -0.21 -0.34 0.31
-0.39 0.04 -0.9 -0.51 -0.6 -0.58 -0.09 -0.39 0.98 1.13 0.44 0.54 -0.31 -0.84 -1.12 0.17
-0.49 -0.21 -0.34 -0.31 -0.45 -0.24 0.05 -0.15 0.98 0.97 0.43 0.41 -0.53 -0.68 -0.86 -0.25
- - - - -0.89 -1.06 - 0.03 2.34 1.6 -0.37 0.53 - - 1.87 -
-2.1 -0.51 -1.74 -1.42 -0.56 -1.15 -0.66 -0.21 1.41 1.05 1.02 -0.88 0.73 -0.54 -0.62 0.56
-0.03 - - - - - - - 2.87 2.28 1.51 - - - - -
-2.55 -2.0 -2.67 -1.51 -1.29 -1.63 -0.0 -0.12 1.5 0.76 0.94 -1.4 1.03 -0.4 -0.68 1.14
-2.21 -2.19 -0.97 -0.39 -3.6 -4.4 -0.37 -0.26 1.77 1.75 0.85 0.22 0.01 -0.71 -1.46 -0.28
-0.89 -1.1 -0.65 -0.01 -0.58 -0.23 -0.54 0.19 1.0 1.35 0.55 0.19 -0.53 -0.49 -0.88 -0.14
-0.22 -0.56 -0.93 -0.5 -0.31 -0.72 0.26 -0.92 1.37 1.05 0.67 0.94 -0.86 -0.72 -1.51 -1.28
-0.48 -1.82 -0.54 -0.2 -3.05 -2.71 -1.35 -0.59 1.73 1.41 -0.05 0.31 -0.36 -0.39 -0.54 0.76
-0.61 -1.04 -1.34 -0.93 -1.34 -0.44 0.08 -0.17 1.42 1.36 0.46 0.37 -0.64 -0.41 -0.69 -0.11
-2.73 0.49 -2.97 -3.22 -0.84 - -1.41 0.25 2.01 1.93 1.75 -0.19 - - - -
-2.03 -6.73 -0.63 -0.16 -4.52 -5.1 -2.33 -2.32 2.05 1.62 0.6 -0.16 0.49 -0.26 -1.45 0.59
-1.25 -1.14 -2.53 -2.31 -3.27 -1.67 -0.77 -0.88 1.16 1.53 0.89 0.5 0.34 0.17 -0.11 0.57
-0.74 -0.6 -1.82 -1.5 -1.47 -0.76 -0.5 0.26 1.25 1.25 0.89 0.44 -0.28 -0.6 -0.2 -0.11
- - - - - - - -8.47 2.61 2.25 2.02 -0.04 -3.86 - - -4.99
-0.16 -0.65 -1.25 -1.02 -1.19 -1.01 -0.43 -0.65 1.24 0.59 0.2 0.06 0.4 0.56 -0.26 0.64
-1.89 -0.15 -2.97 -2.28 -2.88 -1.16 -0.04 0.68 1.82 1.54 0.59 0.38 -0.98 -1.06 -1.21 -0.55
-2.23 -2.55 -0.37 0.35 -0.25 -0.65 -0.15 -1.33 1.81 1.43 0.97 -0.75 -0.73 -1.56 -1.69 -0.35
-3.18 -0.18 -5.15 -7.23 -4.92 -3.4 0.41 0.79 2.12 1.67 0.49 0.75 -2.14 -0.86 -2.45 -2.22
-0.66 - -1.37 0.56 -1.25 - -3.04 - 2.32 1.46 1.13 -0.78 - 0.03 0.51 -
-2.4 - -1.85 - - -3.46 -0.97 0.19 2.74 1.69 0.46 1.25 - -2.63 - -
-0.88 -0.75 -0.8 -0.28 -0.18 -0.43 0.31 -0.67 1.38 1.39 0.93 0.84 -1.94 -1.76 -1.99 -2.08
-2.9 -4.38 -4.85 - -3.59 -4.03 -2.98 -0.39 2.21 2.12 1.86 0.2 -1.49 -4.17 - -0.74
-3.53 - -1.65 -2.0 -0.47 -0.4 -0.75 -0.03 2.12 1.68 1.47 0.72 -2.58 -4.81 - -2.84
-3.19 - -0.92 -0.58 -0.93 -2.09 -1.05 -0.56 2.65 1.79 -1.12 1.05 - -2.56 -1.49 -
-0.96 -0.85 -0.42 -0.15 -0.98 -0.14 -0.21 -0.0 1.3 1.17 0.49 0.4 -0.59 -0.96 -1.71 0.1
-1.48 -1.4 -0.04 -0.11 -0.2 -1.09 -0.79 -0.02 1.69 1.31 0.32 0.57 -1.18 -1.56 -2.37 0.06
-0.34 0.1 -1.47 -0.66 -1.55 -1.26 -0.29 -0.04 1.68 1.21 0.31 0.25 -0.53 -1.1 -1.68 0.22
-0.53 -0.02 -0.99 -1.01 -1.36 -0.52 -0.53 -0.57 1.59 0.74 0.48 0.32 0.06 0.04 -0.77 -0.16
-1.48 -0.71 -2.61 -2.16 -2.36 -3.23 -0.43 -0.71 1.95 1.76 1.59 -0.43 -1.28 -1.2 -0.71 -0.88
-0.29 0.31 -0.83 -0.81 -0.76 -1.15 -0.04 0.41 1.35 1.19 0.31 0.38 -0.99 -1.07 -1.16 -0.59
- -1.87 0.18 0.55 0.64 -1.22 -0.56 -0.47 2.06 1.76 0.3 -0.08 - - - -
-2.2 -1.19 -2.97 -2.1 -5.22 -1.28 -1.12 0.11 2.5 1.03 0.37 0.72 -0.82 -1.08 -2.34 0.19
-0.7 -1.27 -0.83 -0.34 -1.11 -0.55 0.02 -0.78 1.15 1.59 0.77 0.28 -0.35 -0.85 -1.31 -0.02
-0.87 -0.5 -2.69 -2.27 -3.16 -2.33 -0.55 -0.25 1.75 1.02 0.31 0.28 0.55 0.34 -0.48 0.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.