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Heatmap: Cluster_300 (Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023))

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
30.32 8.96 1.85 1.21 3.5 8.16 25.94 15.51 4.71 7.96 16.8 17.44 330.85 403.29 226.17 244.49
21.36 11.12 4.51 3.26 6.98 9.42 25.71 12.76 9.84 10.65 15.23 10.53 20.87 31.94 32.39 25.79
20.27 7.73 5.0 5.5 3.57 5.99 18.01 13.67 6.81 4.65 10.02 12.35 31.38 35.39 25.6 45.92
29.61 8.86 12.94 7.65 12.85 20.84 47.03 23.33 16.37 26.25 41.33 19.97 51.03 61.99 60.37 37.39
29.43 5.45 10.21 8.9 11.38 18.12 32.1 13.83 14.98 18.57 30.07 14.52 27.63 27.17 24.39 24.88
94.48 32.83 19.29 17.21 25.35 27.18 78.27 56.33 45.89 37.16 61.96 49.24 43.99 45.32 35.53 46.45
66.73 23.14 19.77 16.36 21.59 24.48 61.8 34.52 32.97 26.87 32.62 44.56 67.14 80.13 89.15 42.45
43.92 16.95 17.77 16.97 23.82 28.21 60.39 33.32 31.96 28.74 57.36 32.73 48.33 55.83 49.76 35.35
13.82 8.75 5.07 4.09 8.09 7.68 19.13 8.61 8.93 10.2 13.05 10.5 46.09 37.62 31.04 35.19
10.68 2.76 2.69 2.03 3.12 2.82 9.4 6.9 5.3 6.78 8.02 3.73 10.59 8.1 5.11 6.46
31.7 25.27 0.86 0.2 20.4 14.17 57.79 31.81 42.85 18.32 33.01 23.71 59.82 38.14 36.89 52.22
11.47 10.11 4.72 4.01 6.63 9.36 22.74 8.26 9.23 8.28 11.15 10.17 18.22 8.83 10.14 26.94
25.11 4.94 4.07 1.8 0.0 9.07 17.1 5.72 4.4 2.71 10.58 11.47 53.12 56.61 46.4 89.39
26.93 7.04 8.06 8.55 11.37 16.9 27.02 20.06 14.34 16.38 26.91 15.97 41.93 29.67 16.74 37.8
26.27 11.79 9.57 9.36 12.71 13.27 23.62 16.79 13.48 10.74 15.15 16.36 28.42 30.47 28.29 27.58
6.9 4.01 3.7 2.48 4.67 6.28 8.63 6.59 7.8 4.74 9.36 6.36 7.27 6.37 9.64 8.7
31.69 19.03 13.69 17.91 20.01 27.75 40.6 21.88 28.21 27.31 43.72 23.65 17.15 13.02 10.27 22.31
39.22 19.3 12.19 13.29 17.0 22.69 39.3 21.85 19.16 23.93 32.64 26.69 44.82 41.89 34.22 53.08
41.18 5.92 4.69 3.26 1.69 8.01 33.06 19.69 9.02 11.24 20.83 6.01 33.04 39.58 40.69 31.42
184.25 71.28 72.96 54.75 103.14 129.77 174.22 102.83 108.91 104.39 175.43 140.25 189.57 235.28 248.1 179.0
24.01 28.68 13.89 13.83 14.34 15.65 63.72 29.99 23.32 25.72 34.91 39.09 26.57 30.43 20.7 31.05
6.72 5.58 0.26 0.39 3.29 2.77 14.87 3.81 5.09 4.35 12.18 7.12 5.09 2.76 1.29 4.67
100.31 91.32 68.98 51.57 76.79 76.98 214.78 116.97 108.03 93.42 126.31 142.55 98.45 95.59 91.66 108.71
22.29 8.39 6.17 3.86 9.91 9.99 19.96 9.81 7.38 7.72 11.72 8.3 24.54 22.16 26.66 17.85
5.61 2.13 1.66 1.66 2.76 3.2 9.29 5.53 6.14 2.53 5.6 1.75 11.66 5.96 2.91 12.92
3.04 0.53 0.53 0.45 0.53 0.72 1.91 1.24 0.89 0.56 1.97 0.88 3.07 3.43 1.78 3.32
2.12 0.37 0.49 0.63 0.53 1.8 3.58 1.71 2.81 2.11 3.16 0.76 2.34 2.28 0.0 4.48
11.11 6.37 2.08 2.35 3.2 1.85 15.14 6.58 4.61 5.7 7.99 7.01 7.64 10.49 10.53 8.56
43.01 12.89 14.13 15.0 13.31 17.01 84.31 41.35 51.9 29.56 48.98 50.73 80.45 87.97 65.02 98.25
140.52 72.9 64.48 71.49 79.15 100.53 148.06 85.18 101.68 86.93 138.62 104.59 127.38 135.19 134.42 111.49
14.68 3.59 2.77 1.97 3.8 4.53 9.92 6.92 3.76 5.77 8.93 4.46 15.94 11.0 7.28 19.6
37.06 10.72 4.06 4.07 3.19 5.17 40.38 4.96 7.53 19.35 27.62 12.62 109.48 102.45 11.96 100.49
20.13 11.09 7.94 6.09 12.0 16.21 27.54 15.52 18.24 16.97 23.09 15.45 26.1 24.09 19.44 23.84
29.72 9.84 6.14 4.46 5.46 9.68 31.75 12.49 13.67 21.58 33.67 19.28 36.15 36.38 31.26 27.16
3.79 3.18 0.65 0.76 1.42 1.3 7.32 3.38 2.18 3.54 7.75 4.16 5.21 4.64 4.3 5.87
36.89 24.12 22.45 20.73 23.83 26.88 44.88 24.99 26.57 27.71 38.59 19.88 40.9 29.68 36.3 44.63
10.01 5.42 2.5 1.23 2.4 3.47 13.44 7.87 3.16 1.78 14.5 6.08 8.27 8.63 13.45 4.23
119.75 42.53 54.24 53.58 68.33 62.03 100.8 77.7 72.45 64.26 106.69 96.18 86.83 61.92 65.45 77.05
29.69 11.03 5.64 3.43 9.51 12.49 39.04 20.41 16.37 16.94 33.85 19.25 27.4 25.57 27.93 36.71
19.7 10.25 10.28 10.77 12.3 17.45 32.24 14.9 17.83 18.34 26.4 14.7 22.8 22.0 10.24 21.93
40.25 16.8 0.76 0.03 25.96 24.15 87.09 41.12 47.21 46.76 48.71 19.99 49.2 32.01 16.24 54.16
15.77 8.11 9.01 9.81 13.16 16.23 24.73 13.76 15.97 17.67 17.95 15.62 15.78 10.94 5.99 14.78
22.25 7.01 5.51 6.14 6.76 6.84 35.07 15.64 8.48 6.57 35.58 9.49 24.3 14.39 4.99 18.0
8.29 1.41 1.68 0.82 1.9 2.35 3.34 2.63 0.51 2.9 5.68 4.61 17.14 12.03 11.37 15.64
24.04 6.31 4.18 3.51 7.62 6.38 21.13 16.09 7.86 9.23 16.86 13.76 14.2 14.26 9.03 14.37
28.0 11.31 7.7 7.19 9.35 9.85 30.65 18.97 11.57 11.64 30.91 23.47 17.34 22.69 20.49 19.35
24.57 17.38 9.42 8.6 10.37 8.07 27.62 13.13 12.91 13.17 15.13 17.16 12.69 10.3 9.13 16.03
54.26 34.77 16.94 21.58 41.73 41.76 87.22 54.31 50.3 38.78 64.64 33.7 82.95 53.23 32.74 67.98
89.44 33.96 14.84 13.31 22.27 20.61 77.74 48.59 41.15 44.51 65.85 30.93 101.7 122.85 141.48 84.53
100.42 36.39 41.19 25.31 33.26 40.75 81.58 46.42 58.84 54.35 76.97 47.65 64.71 73.02 83.16 79.25
4.88 2.74 3.06 4.31 3.04 2.76 8.56 4.44 3.68 2.6 11.46 4.18 8.37 5.74 2.06 9.33
19.62 0.0 3.05 2.98 4.3 3.54 13.34 10.65 3.88 3.16 8.84 4.89 22.87 11.79 12.77 23.37
11.47 3.3 2.78 2.73 4.03 6.54 13.61 9.59 6.52 7.9 10.21 6.48 15.63 11.76 8.71 15.67
142.9 61.26 52.66 44.28 56.28 75.82 129.48 71.36 68.64 66.14 98.19 73.46 144.99 161.28 166.4 135.88
27.0 17.32 11.11 13.63 15.67 15.75 42.86 25.92 22.34 19.04 45.28 30.67 23.88 18.41 16.32 22.32
61.28 19.75 19.97 19.0 18.43 26.55 52.0 27.93 29.29 29.26 53.61 28.43 94.12 74.03 65.03 100.87
133.07 72.99 61.15 85.69 93.99 90.31 149.27 89.21 101.53 82.04 128.49 92.55 71.46 61.78 46.82 88.9
56.34 42.05 19.95 9.92 21.95 22.33 97.84 32.66 37.93 38.61 52.9 45.0 55.26 76.38 86.2 55.38
8.2 8.24 2.57 6.01 7.75 6.92 17.62 11.83 8.95 7.76 12.76 9.12 12.4 15.04 13.13 10.53
27.23 16.5 13.88 9.32 14.0 16.6 43.07 29.68 24.9 27.91 32.91 23.94 33.02 33.25 50.3 31.16
230.74 132.4 99.91 108.84 132.56 134.28 263.25 150.82 182.44 169.62 213.24 209.56 164.86 196.4 189.49 152.38
36.42 15.61 10.28 7.66 12.17 18.04 32.0 18.56 17.84 21.37 22.82 13.15 29.28 22.71 24.0 26.01
28.8 8.46 12.55 9.59 11.68 14.22 36.42 24.95 19.33 21.36 30.92 22.24 38.24 37.62 45.47 34.59
21.13 10.71 7.29 9.1 12.71 11.26 27.81 16.47 18.86 17.03 20.88 14.54 17.07 16.24 11.34 20.12
6.68 0.53 2.58 2.21 4.29 3.74 9.72 6.04 10.55 7.86 7.6 3.86 7.54 6.18 4.46 9.5
15.34 5.67 3.34 4.55 3.55 5.62 19.87 15.37 7.19 6.96 22.8 17.57 25.06 26.38 19.32 22.21
48.84 13.05 15.83 11.48 18.25 21.86 43.44 22.05 25.73 34.02 54.42 37.1 99.89 91.17 68.56 112.99
16.44 4.38 6.97 7.92 8.46 13.59 28.08 16.43 13.61 12.61 25.88 14.03 27.72 17.12 10.53 22.17
48.47 1.47 9.06 3.41 8.01 11.4 32.19 26.16 3.5 2.36 26.85 16.9 97.97 88.33 90.61 62.31
15.65 5.59 6.14 6.93 8.49 9.12 16.28 12.02 11.92 11.14 14.27 9.17 24.66 21.62 18.98 20.81
3.3 5.14 0.66 1.13 1.62 1.81 8.33 6.42 4.09 3.85 3.72 6.04 25.01 24.82 17.01 26.48
4.74 0.61 1.35 1.31 2.2 1.45 6.86 2.17 2.45 4.33 5.68 3.42 7.05 4.9 3.52 8.96
13.54 6.31 1.85 1.77 6.09 7.18 21.27 6.81 5.48 6.77 18.56 5.98 22.11 9.23 7.02 19.05
28.07 13.52 9.84 7.67 13.34 15.8 35.51 20.58 23.56 18.74 26.66 19.06 30.85 25.8 32.72 29.23
139.52 39.11 47.61 33.51 50.26 74.28 129.36 67.15 75.69 60.24 130.42 109.85 134.71 145.13 135.56 114.03
53.26 38.8 18.37 14.03 28.38 28.67 97.13 54.83 47.68 32.23 55.61 69.83 30.73 29.32 34.18 27.22
47.1 7.92 9.42 11.49 8.81 13.88 30.24 17.73 10.09 14.86 27.98 27.52 32.87 33.94 26.79 35.11
9.85 7.22 4.27 2.97 5.18 4.8 11.87 6.83 6.07 9.09 12.28 9.02 12.18 13.55 13.78 12.87
40.29 22.54 8.81 11.98 18.02 26.44 62.04 31.15 28.28 33.14 42.01 26.48 49.63 36.23 20.48 57.57
11.3 1.79 0.84 1.06 3.02 3.81 8.79 3.87 4.75 3.7 5.88 3.65 8.41 6.9 7.64 10.34
61.07 14.26 18.0 35.04 30.26 41.64 102.96 53.63 41.13 34.41 91.6 48.33 17.07 12.37 8.09 27.08
32.43 10.9 13.01 9.61 14.34 19.76 34.04 19.8 15.15 21.13 32.09 15.21 32.87 33.76 30.28 35.62
25.47 10.6 2.63 2.32 6.26 4.88 25.47 19.31 10.61 9.78 15.1 18.11 41.84 30.3 15.91 43.4
21.98 6.02 6.01 3.53 8.35 10.18 17.86 10.48 7.62 8.24 14.43 9.87 18.11 24.36 30.5 19.63
15.93 6.52 3.73 4.4 4.59 7.08 24.8 10.94 13.67 9.21 26.58 16.98 14.15 11.27 9.13 15.67
2.9 3.16 1.56 1.53 2.61 2.8 6.92 3.08 3.89 2.95 3.96 3.21 8.5 3.85 4.22 6.43
25.57 6.77 6.96 6.81 9.14 10.23 23.75 14.28 12.88 11.97 17.45 12.4 15.2 11.74 12.43 15.36
398.88 21.67 22.97 39.7 45.4 34.48 282.56 167.06 71.71 63.15 237.23 141.88 365.17 313.25 117.64 339.66
26.2 13.79 9.55 11.34 8.4 9.66 30.3 14.67 18.46 14.86 31.1 26.35 20.53 17.58 8.53 24.19
825.85 226.72 143.68 98.91 126.88 195.87 837.59 460.68 312.49 272.12 455.44 492.58 1228.29 1376.9 1490.25 981.62
13.56 4.74 4.64 3.39 5.07 8.65 16.64 5.32 8.48 11.17 15.41 9.6 12.48 14.1 17.43 14.62
27.79 10.87 4.73 4.97 6.85 9.74 17.94 13.69 8.32 6.55 16.77 10.69 23.78 17.16 11.05 25.7
26.87 4.11 4.86 7.84 5.43 3.84 25.29 11.69 10.23 9.87 18.05 14.66 30.15 27.31 16.21 22.59
29.34 13.58 10.65 9.94 15.12 14.66 34.93 18.67 22.39 23.03 32.86 15.12 30.64 29.08 25.63 28.12
16.1 4.82 6.07 3.79 5.69 6.78 17.81 9.68 5.3 7.68 14.42 6.55 11.99 10.71 12.84 12.12
52.88 21.42 23.33 20.61 20.3 25.39 36.03 28.55 30.64 19.93 50.65 32.82 74.06 77.86 70.69 74.19
100.19 56.23 27.35 17.12 36.68 48.73 100.93 52.89 45.33 45.79 52.22 50.88 104.07 137.38 161.16 108.29
71.54 39.98 29.89 26.74 52.65 37.97 155.39 54.26 100.24 85.05 98.08 107.65 33.04 40.71 54.12 37.12
41.6 43.47 16.69 24.26 21.18 23.07 57.2 31.84 32.77 40.18 56.37 38.62 55.25 41.1 27.23 47.27
41.51 12.84 12.49 11.34 14.38 17.6 55.44 23.64 13.57 29.35 44.59 15.74 63.08 58.45 45.07 48.71
1.6 1.37 0.7 0.52 1.23 0.87 2.49 2.06 2.77 1.65 1.81 1.85 3.8 3.8 2.2 2.1
90.3 41.46 41.58 46.15 40.69 43.78 81.09 51.05 41.8 52.1 71.86 54.11 171.24 180.65 133.96 163.06
82.79 25.28 11.3 4.07 15.13 16.88 79.65 30.59 26.2 39.48 61.22 40.94 72.01 99.15 113.38 63.9
59.76 40.02 15.05 17.33 19.4 27.47 88.1 35.12 38.2 41.83 67.68 48.82 22.3 24.42 21.81 37.42
0.29 0.0 0.0 0.0 0.0 0.0 0.82 0.23 0.0 0.0 0.75 0.0 3.34 1.17 3.28 0.77
100.35 35.26 36.15 32.73 43.29 45.32 85.73 38.89 52.34 60.34 99.09 73.87 58.06 59.54 64.41 55.91
14.79 6.87 3.74 2.96 5.84 8.15 16.79 7.57 7.56 9.08 11.79 9.32 20.48 21.14 16.29 20.11
9.29 2.11 1.04 1.66 2.41 2.76 7.38 3.74 4.06 3.21 7.18 2.27 16.69 13.29 6.75 28.35
38.58 41.87 13.34 10.98 14.66 14.19 90.1 54.81 29.02 24.21 36.93 53.37 104.65 112.47 123.85 96.56
15.67 14.82 6.4 4.93 8.35 8.21 22.92 10.82 10.4 12.39 20.49 16.39 12.16 13.24 11.33 13.37
20.85 19.68 8.6 9.83 11.83 13.28 33.99 18.6 13.1 12.01 28.57 17.83 22.4 20.08 19.34 21.47
11.5 5.24 4.0 2.8 5.65 6.63 15.1 7.84 7.15 6.66 15.44 11.05 20.45 16.37 15.61 16.75
21.66 8.96 7.53 5.31 12.29 11.77 35.3 21.94 24.87 12.13 23.21 25.86 108.18 79.84 52.67 138.34
455.64 137.73 78.94 81.11 111.33 156.32 336.68 209.08 200.84 176.87 311.39 293.13 1624.2 1295.39 1185.4 1201.49
95.57 43.63 20.17 18.95 36.53 38.94 72.28 57.18 37.9 37.61 48.29 47.6 104.45 86.21 86.18 112.94
31.58 21.64 16.92 20.73 24.41 30.59 59.58 25.23 29.47 30.42 46.95 32.5 26.73 17.0 10.45 28.98
302.94 93.12 97.28 102.44 118.9 106.82 317.58 193.69 163.45 194.47 241.58 224.05 331.32 358.8 328.84 326.65
6.52 8.77 4.71 5.04 3.69 4.48 16.94 10.53 8.8 6.88 8.72 11.85 52.39 41.17 32.04 42.13
142.87 44.75 75.57 73.1 81.88 113.19 182.54 108.58 110.48 93.28 162.16 110.87 159.82 151.86 126.86 103.89
54.04 6.95 12.38 6.93 13.38 14.38 32.7 21.52 13.82 19.43 32.28 24.42 49.45 55.79 51.33 48.83
35.43 12.22 8.83 6.06 12.04 16.3 36.58 26.61 15.34 12.9 28.93 26.51 25.03 22.5 21.68 25.05
63.5 47.67 32.09 27.48 36.83 32.21 69.38 24.97 37.05 37.37 39.46 38.17 54.09 56.17 71.71 63.47
13.03 3.41 2.7 1.88 5.22 5.96 10.54 6.36 4.86 7.48 12.77 6.37 17.35 17.24 15.28 14.38
13.08 9.32 5.69 5.07 9.44 11.94 19.56 15.19 15.3 11.2 15.92 10.35 22.25 16.72 15.45 20.17
8.05 3.11 2.37 1.97 2.09 3.5 6.98 3.87 3.02 3.97 5.6 3.32 6.12 8.48 7.63 8.86
5.81 1.02 1.94 1.39 3.0 4.26 8.69 4.7 5.83 4.67 6.34 3.59 11.01 7.49 8.04 12.43

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)