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Heatmap: Cluster_206 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.96 -1.86 -1.89 -1.14 -0.9 -0.35 0.13 0.44 1.87 1.77 -0.78 -1.0 -0.3 -0.8 -1.84 -0.17
0.71 0.82 -0.05 0.19 0.4 -0.1 0.27 -0.56 -0.54 -0.18 0.54 0.61 -0.98 -1.69 -1.5 -0.65
1.09 0.42 0.25 0.28 0.12 0.02 0.26 -0.74 -0.22 -0.03 0.03 -0.41 -0.34 -0.96 -0.84 -0.39
-0.05 -1.11 -0.27 0.52 0.37 0.06 0.33 -0.5 0.03 -0.4 1.25 1.42 -1.63 -2.09 -2.03 -1.44
0.77 -0.51 -1.34 -1.35 -1.5 -0.64 0.42 -0.19 0.34 0.49 0.62 -0.59 0.66 -0.03 -0.23 0.39
-0.3 -0.86 -0.66 -0.43 -0.47 -0.09 0.85 -0.09 0.48 0.09 1.11 0.26 0.03 -0.71 -1.23 -0.02
-0.41 -0.69 -0.6 -0.35 -0.08 0.2 0.6 -0.04 0.64 1.16 0.4 0.1 -0.38 -1.14 -1.52 -0.22
1.91 -0.08 -2.74 -3.19 -2.08 -2.7 -0.36 0.03 -2.7 -2.48 -0.26 -0.59 1.01 0.58 -0.16 1.38
-0.06 0.54 -0.45 -0.24 -0.04 0.11 0.48 -0.83 0.79 0.52 0.33 0.72 -0.99 -1.53 -1.37 -0.52
-0.55 -0.07 -0.94 -0.07 -1.14 -0.35 0.87 -0.06 0.54 0.73 1.63 0.56 -1.45 -2.11 -3.27 -1.03
-0.41 -1.25 -2.04 -1.54 -1.49 -1.13 1.14 1.22 0.89 1.15 0.73 -0.14 -0.51 -1.27 -1.33 -0.44
0.08 -1.02 -2.26 -2.15 -1.66 -0.96 -0.37 0.83 1.71 1.81 -0.57 -0.94 -0.6 -0.78 -0.92 -0.16
-1.24 -1.37 -1.94 -1.99 -0.37 -1.0 -0.11 1.87 1.31 1.06 -0.6 -0.42 -0.14 -0.66 -1.4 -0.1
0.2 -0.27 0.16 0.78 0.14 -0.38 0.61 -0.28 0.71 0.32 0.56 -0.01 -1.13 -1.59 -1.99 -0.8
0.08 -0.05 -1.32 -1.04 -0.83 -0.92 0.45 0.39 0.58 0.16 0.69 0.23 0.08 -0.39 -0.28 0.36
0.12 -0.49 -0.27 -0.2 0.26 0.33 0.27 -0.41 -0.05 0.27 0.84 0.07 -0.15 -0.71 -0.86 0.02
0.41 -0.9 -1.1 -0.53 -0.65 1.11 0.45 -0.03 -0.05 0.15 0.42 -0.26 0.11 -0.38 -0.85 0.24
1.78 -0.94 -0.17 -1.21 -0.4 -0.91 -1.19 -0.45 -5.05 - -4.73 -2.39 1.07 0.64 0.74 1.43
0.72 0.53 -0.52 -0.05 0.16 0.12 0.32 -0.18 0.08 0.15 0.42 -0.71 -0.41 -0.82 -0.81 -0.14
2.01 1.47 -2.2 -2.2 -1.62 -1.65 -0.31 0.75 -0.42 -0.65 -0.12 0.17 -0.72 -1.19 -1.42 -0.35
0.54 0.11 -0.9 -1.05 -0.32 -0.08 0.38 -0.19 0.38 0.07 0.69 0.36 -0.08 -0.51 -0.91 0.15
-0.44 -0.79 0.33 0.71 0.38 0.17 0.38 -0.32 0.29 0.29 0.62 0.23 -0.74 -1.18 -1.39 -0.54
-0.74 -0.32 -0.98 -1.24 -0.79 -0.2 0.85 -0.17 -6.95 -4.89 -0.26 -0.25 1.45 0.52 -0.71 1.6
-0.26 -1.7 -1.58 -1.36 -1.09 -0.54 0.44 0.8 1.18 1.43 -0.03 -1.35 -0.09 -0.46 -0.69 0.34
1.4 -1.15 -0.11 0.34 0.21 0.66 -0.29 0.39 -1.64 -0.98 0.23 -0.16 -0.39 -0.55 -1.65 0.25
0.31 -0.59 -0.57 -0.22 0.35 0.61 0.46 -0.02 -0.28 -0.02 0.28 -0.46 -0.01 -0.58 -0.48 0.34
0.61 0.18 -0.73 -0.71 -0.88 -0.96 1.14 -0.95 -1.28 -0.67 0.69 0.42 0.2 -0.13 -0.42 0.62
0.95 -0.63 -1.14 -0.69 -1.05 -0.96 1.15 0.45 0.65 0.28 0.59 -0.12 -0.45 -1.08 -1.7 0.04
0.18 0.01 -3.81 -3.23 -2.81 -2.26 -2.26 1.03 0.74 1.51 -2.47 -3.73 1.14 0.45 -0.21 0.9
1.24 0.61 -2.47 -2.16 -1.86 -1.47 0.79 -0.2 0.21 -0.05 0.81 0.41 -0.1 -0.72 -0.96 0.27
1.0 -0.77 -1.55 -0.68 -0.78 -0.57 0.26 -0.28 -0.55 0.13 0.76 -0.14 0.37 -0.38 -0.26 0.92
-6.62 -6.54 0.68 1.08 1.2 0.97 -1.41 -0.41 0.52 0.54 -0.13 -1.21 -0.12 -1.03 -2.03 -0.01
0.24 -0.4 -2.2 -2.1 -2.38 -2.01 -0.2 0.85 1.44 1.38 -0.05 -1.63 -0.11 -0.38 -0.73 0.68
0.07 -0.9 -0.5 -0.26 -0.14 0.14 0.34 -0.23 0.5 0.54 0.65 0.07 -0.14 -0.53 -0.84 0.14
-0.33 -0.9 0.08 0.07 -0.22 0.05 0.7 0.06 -0.17 -0.58 0.83 0.35 -0.14 -0.29 -0.72 0.09
-1.28 -0.44 0.16 0.53 0.21 0.62 0.13 0.16 0.72 0.89 0.92 0.05 -1.73 -2.35 -2.44 -1.86
-1.47 -1.13 1.03 1.41 1.43 1.4 -2.59 -2.75 -1.03 -0.61 0.8 0.46 -2.36 -3.31 -3.74 -2.37
0.42 -0.75 -0.98 -0.63 -0.06 0.02 0.73 -0.0 0.19 0.03 1.21 0.52 -0.66 -1.08 -0.83 -0.51
-0.05 -0.65 -1.02 -0.55 -0.63 -0.4 0.5 -0.03 0.8 0.64 0.6 -0.29 0.09 -0.3 -0.8 0.43
0.54 -0.26 0.48 0.85 0.43 -0.04 -0.05 -0.71 -0.18 -0.38 0.59 0.7 -1.52 -1.51 -1.49 -0.35
1.43 -0.36 -3.27 -3.28 -3.35 -2.72 -2.33 1.08 1.19 1.83 -2.51 -2.81 0.08 -0.24 -1.4 0.41
0.87 -0.67 -0.62 0.07 0.13 -0.1 0.7 -0.08 0.51 -0.06 0.11 -0.86 -0.01 -0.65 -1.35 0.27
-0.13 1.53 -1.4 -1.54 -1.15 -1.61 0.19 0.53 -0.02 -0.15 0.68 0.76 -0.22 -0.76 -1.26 0.1
-7.44 -5.75 -0.87 -0.29 -3.61 -5.5 1.05 1.51 -4.12 -5.06 -5.15 -6.72 1.52 0.77 0.6 1.75
2.74 0.39 - -10.03 -9.23 -6.4 -3.69 -2.07 -4.12 -4.78 -3.87 -3.7 1.13 0.7 -0.08 1.43
0.35 -0.4 -0.71 -0.57 -0.21 -0.32 1.15 -0.58 -0.53 -0.15 -0.0 -0.81 0.72 -0.2 -0.51 0.8
0.25 -0.5 -1.49 -1.17 -0.97 -0.87 0.53 -0.07 -1.51 -1.32 -0.4 -0.94 1.06 0.78 0.64 1.3
-0.66 -0.87 -1.34 -1.05 -0.44 -0.42 0.91 0.14 0.82 0.9 1.15 0.43 -0.65 -1.1 -1.73 -0.21
-0.22 -0.9 -1.22 -0.33 0.23 0.71 1.35 -0.35 -1.03 -1.34 0.93 0.63 -0.1 -0.75 -1.88 0.13
1.21 0.32 -0.49 -1.21 -0.14 -0.29 0.06 -0.03 -1.06 -0.93 -0.49 -1.34 0.78 -0.06 -0.35 0.99
-0.19 -0.27 -0.28 0.31 -0.68 -1.3 0.96 0.08 0.45 -0.32 -0.45 -1.81 0.68 -0.09 -0.44 0.79
0.55 0.09 -0.85 -1.15 -1.47 -0.03 -0.24 -0.08 -1.42 -0.88 -1.54 -3.43 1.64 0.9 -0.22 1.09
0.17 0.29 -0.91 -0.68 -0.02 -0.2 0.53 0.23 0.59 0.45 0.73 0.29 -1.12 -1.0 -1.17 -0.2
0.61 -0.41 -0.47 -0.55 -0.88 -0.96 0.57 0.33 -1.2 -1.33 -0.6 -1.13 0.9 0.3 0.33 1.15
0.33 0.23 -1.02 -1.02 -0.95 -0.61 0.86 -0.01 -0.37 0.08 1.31 0.6 -0.3 -0.97 -1.54 0.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.