1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_89 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.35 -1.73 0.81 0.02 1.17 0.57 -3.05 -2.72 -5.65 -3.28 -3.97 -2.67 1.01 1.45 0.99 0.54
-0.62 0.24 -0.61 -0.81 0.48 0.01 0.82 0.12 0.11 -0.29 0.04 0.5 -0.25 -0.26 -0.3 -0.23
0.96 1.47 -1.8 -2.25 -1.1 -1.03 0.36 -0.97 0.19 0.45 0.24 0.58 -0.79 -0.37 -0.3 -0.55
-4.75 -1.97 - - - -5.33 - -3.77 2.27 2.15 1.17 -0.78 -2.06 -1.02 0.68 0.25
-0.1 3.39 -5.72 -4.97 -1.39 -0.95 -1.99 1.3 - -7.67 -7.64 -5.42 -2.14 -1.4 -3.42 -2.61
-2.97 1.58 1.9 0.64 1.44 1.0 0.29 -0.26 -4.96 -4.48 -2.36 -1.75 -5.2 -5.45 -2.85 -4.32
-1.91 -0.83 -1.75 -2.3 -0.24 -0.58 -2.53 -1.1 -1.8 -2.58 -0.91 -0.94 0.7 2.04 1.78 0.87
-2.04 1.81 1.22 0.9 0.62 -0.4 -2.32 0.81 -0.48 -0.29 -2.55 -1.63 -1.49 -1.08 -1.36 -0.89
0.65 -1.96 0.47 0.04 0.45 1.94 -1.64 -0.05 -0.0 -1.67 -1.02 -1.08 -0.68 0.22 -1.06 -0.49
-2.76 -4.74 0.2 0.81 0.82 2.01 -0.88 -1.74 -2.37 -1.73 1.63 1.36 -5.88 -4.31 -5.26 -4.46
-2.56 -1.89 1.77 1.03 1.79 1.26 -1.34 -3.11 -1.92 -0.77 0.12 0.59 -4.65 -4.16 -2.91 -4.09
0.89 2.95 -2.98 -3.51 -2.68 -2.81 -0.17 -0.72 0.83 -1.13 -0.88 -1.2 -1.61 -1.21 -2.53 -1.78
2.08 1.66 -0.24 -1.79 -0.28 -1.47 -0.99 -0.29 -4.64 -5.32 -1.87 -0.39 -0.88 0.22 -0.2 0.37
-4.0 - -0.07 -0.97 0.5 -0.04 -1.45 -1.76 -6.26 -4.97 -1.84 -0.84 0.76 2.12 1.2 1.15
-1.71 -1.96 -5.22 -6.31 -6.09 -5.68 -5.57 1.59 2.67 2.24 -5.98 -6.67 -1.4 -1.12 -3.33 -1.97
-3.12 -2.93 -2.59 -1.67 -0.02 -0.68 -3.16 -3.25 -5.67 -5.17 -0.64 -0.44 1.68 1.03 2.17 1.19
-3.85 -2.62 0.05 0.37 0.91 1.41 -3.38 -3.25 - -6.57 -6.53 -4.18 1.08 1.67 1.14 0.19
-0.13 -2.29 -2.96 -3.45 -1.25 -2.5 -0.97 0.58 1.97 2.25 -1.27 -0.1 -1.52 -0.73 -0.98 -0.81
-0.4 -1.9 -0.36 0.33 -0.73 1.38 -0.05 -1.15 -0.83 -5.98 1.59 1.68 -2.38 -1.04 -1.72 -0.92
-6.35 - 0.33 0.03 1.14 -0.2 2.76 -1.52 - - 0.26 0.46 -2.65 -2.05 -2.09 -1.61
-2.69 -3.77 -4.8 -4.88 -2.71 -2.15 -3.66 -3.9 - -7.16 - -7.23 0.91 1.99 2.39 2.03
-1.29 -0.83 -0.9 -0.57 -0.68 -1.65 0.27 0.21 -2.07 -1.79 -1.67 -1.54 1.43 1.03 1.46 0.9
-5.27 - -0.8 -4.04 -2.68 -3.41 -0.15 2.18 - - -3.68 -2.79 0.69 1.71 0.5 1.65
-1.81 -1.27 -1.03 -1.86 -0.39 1.01 1.28 -1.06 -0.83 -0.28 0.09 0.57 0.31 0.28 0.04 0.5
-0.19 0.23 -0.23 -0.14 0.13 -0.99 0.82 0.03 -0.59 -0.24 0.58 0.79 -0.56 -0.45 -0.32 -0.23
-3.97 -2.14 -0.85 -1.61 -1.45 -0.7 1.7 2.87 - - -4.09 -1.61 -2.84 -0.24 0.45 -0.97
-2.19 -1.05 -2.28 -1.84 -1.49 -2.01 -0.39 -0.77 0.82 2.49 1.28 1.02 -2.39 -1.99 -2.18 -1.57
-0.89 2.17 -2.27 -2.42 -2.93 -2.36 -0.94 -0.24 1.42 0.56 0.42 1.12 -1.91 -1.65 -1.72 -1.62
-1.88 -3.59 -2.19 -1.73 -0.63 -1.2 -0.46 1.3 -2.63 -3.89 -1.68 -1.05 0.95 1.73 1.62 0.6
0.01 0.55 -1.97 -2.09 -1.21 -1.08 0.4 -0.08 1.38 1.23 0.64 0.54 -1.54 -0.85 -0.91 -1.12
-2.73 -3.41 -3.37 -3.25 -1.03 -1.04 1.31 -0.86 -0.84 0.47 2.02 2.03 -2.26 -1.07 -1.48 -1.21
-0.22 0.85 0.01 -0.98 0.31 -0.37 0.54 0.52 -2.54 -1.42 0.38 1.11 -0.71 -0.67 0.13 -0.76
-2.59 -1.28 1.51 1.25 -0.26 -0.48 1.44 0.68 -1.01 -2.09 0.88 0.33 -3.28 -2.23 -2.53 -6.21
2.03 -3.68 -4.58 -5.44 -4.53 -5.14 -0.35 0.47 -0.23 -0.72 -6.02 -3.52 0.63 1.4 0.98 0.85
-0.14 -5.87 0.07 0.01 0.52 0.47 0.72 -0.22 - - -5.9 -2.68 0.3 0.86 1.51 0.69
-1.89 -2.25 0.09 -0.07 0.8 -1.57 -0.12 1.18 -0.16 -0.53 1.21 1.37 -1.18 -0.12 -2.36 -2.46
-0.98 0.88 0.01 -0.6 -0.87 -0.38 0.43 0.34 -0.5 0.6 1.0 1.03 -1.34 -1.22 -1.15 -0.96
-2.53 -1.18 0.35 0.71 0.6 0.54 0.84 -0.22 0.11 0.31 1.05 0.9 -3.0 -2.88 -2.62 -2.43
-3.18 2.26 -0.37 - - - - - - - - -1.37 1.51 -0.17 0.9 2.12
0.36 -6.5 - - -3.76 -4.03 - 1.8 - - - -4.89 0.7 1.71 1.77 1.45
-1.89 -3.11 0.65 0.87 1.35 1.14 0.73 -1.42 -0.71 -0.79 0.33 0.59 -2.08 -1.75 -1.93 -0.59
0.62 1.65 -1.55 -1.74 -1.25 -1.47 -0.32 -0.58 1.04 0.99 0.53 0.4 -1.35 -1.74 -1.42 -0.83
0.07 -0.22 -1.48 -1.31 -1.13 -0.72 0.28 1.61 -2.89 -2.65 0.23 -0.06 -0.46 1.03 0.62 0.36
-3.34 -5.48 1.14 1.56 1.67 2.59 -4.01 -5.46 -3.92 -4.42 -1.03 -0.77 -4.99 -3.85 -3.33 -4.04
0.73 0.69 -1.78 -1.96 -1.42 -1.07 0.23 -0.78 -0.44 -0.78 0.18 0.19 0.67 0.55 0.53 0.56
-0.97 -0.26 0.86 1.18 0.12 0.58 0.02 -0.16 -0.06 0.16 0.41 0.43 -1.88 -1.25 -2.03 -1.33
-1.65 -1.53 1.54 1.24 1.39 0.68 -0.29 -0.65 -0.98 -0.52 -0.04 0.41 -2.3 -2.2 -2.4 -1.95
-0.64 1.67 -4.01 -2.94 -2.79 -0.78 -4.85 -3.06 1.16 1.55 0.1 -1.16 -0.26 0.73 -0.04 -0.06
-3.18 - -0.17 0.34 1.06 -0.06 0.11 -0.93 - -5.06 1.76 1.92 -1.44 -0.89 -1.37 -0.77
-2.08 0.79 1.88 0.83 1.41 0.94 -4.98 1.21 - -3.69 -2.65 -2.76 -2.4 -0.91 -1.42 -2.48
-2.26 0.23 0.34 0.82 0.74 0.6 -0.09 -1.11 -0.62 -1.25 0.6 1.06 -0.81 -0.56 -0.62 -1.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.