Heatmap: Cluster_317 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-4.26 -2.6 0.58 1.02 1.19 0.49 -0.64 -2.34 - - - - 1.82 0.54 -0.85 1.14
-8.63 -6.93 1.69 1.02 1.64 0.56 -3.54 -5.36 -4.99 -4.89 2.21 0.22 -3.95 -5.4 -5.79 -3.88
-9.09 - - -8.0 - - -5.67 -2.17 2.78 2.92 -1.92 -5.45 -1.37 -2.51 -3.43 -1.45
-0.1 0.53 -1.07 -0.2 -2.15 -0.01 -0.33 -0.68 -4.64 -3.58 -0.69 -0.95 1.6 0.6 0.4 1.32
-3.92 -2.37 -2.52 -2.68 -1.61 -2.2 -1.3 -0.96 -1.96 -1.18 1.88 0.61 1.49 1.15 -1.12 1.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.