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Heatmap: Cluster_205 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.46 -1.42 -0.48 -0.91 0.13 -0.36 -0.72 -0.63 -0.69 -0.69 0.25 -0.43 1.21 0.62 -0.08 0.93
-0.07 -0.54 0.73 1.24 0.52 0.49 -0.15 -0.35 0.45 0.43 0.15 -0.01 -1.86 -2.41 -2.6 -1.41
-0.49 -0.77 -0.6 -0.39 -0.38 -1.0 0.63 0.14 0.03 -0.37 -0.21 -0.41 0.85 0.4 -0.19 0.98
-0.53 -0.61 -0.43 -0.32 -0.23 -0.1 0.37 0.11 0.53 0.16 0.19 0.18 0.33 -0.06 -0.47 0.24
-0.78 -0.2 -0.85 -0.58 -0.83 -0.6 0.22 0.48 -0.07 -0.0 1.21 0.48 0.2 -0.33 -0.53 0.31
-0.72 -1.12 -0.28 -0.75 -0.14 -0.07 -0.01 0.11 -0.06 -0.14 -0.1 0.23 0.75 0.38 0.0 0.7
-0.96 -0.36 0.46 0.53 0.63 0.75 0.14 -0.3 -0.47 0.04 0.4 0.36 -0.57 -0.94 -0.92 -0.57
-0.46 -1.87 1.2 1.34 0.42 0.85 -0.63 -1.29 -0.33 0.07 0.72 0.24 -1.53 -1.78 -2.37 -1.1
-0.71 -0.97 -1.78 -1.35 -0.96 -0.79 -0.02 -0.79 0.0 -0.32 0.43 0.05 1.15 0.7 0.71 0.91
-0.19 -1.15 -1.11 0.07 0.9 2.23 -1.26 -1.87 -2.65 -3.26 0.81 0.74 -0.64 -0.82 -1.39 -0.68
-1.24 -1.72 -2.17 -2.47 -2.35 -1.23 -0.74 0.01 -0.39 -0.38 0.19 0.46 1.25 1.01 0.61 1.43
-0.87 -2.29 -1.27 -0.99 -0.86 0.42 0.62 -0.18 -0.05 0.37 -0.32 -0.31 0.97 0.45 0.14 0.78
1.25 -1.41 -0.76 -1.64 -0.86 -0.97 -0.35 1.16 -3.7 -1.89 -1.13 -0.81 0.66 0.42 0.46 1.38
0.15 -0.52 -0.96 -0.48 -0.41 0.17 0.31 -0.41 -0.23 0.45 0.66 0.42 0.1 -0.03 -0.64 0.34
-2.37 -2.3 1.45 1.32 2.57 1.27 -2.1 -2.05 -2.89 -2.76 -3.12 -2.08 -1.98 -2.6 -2.59 -1.53
0.2 -0.65 0.7 1.26 1.1 0.91 -0.18 -0.84 -2.04 -2.78 0.31 -0.77 -0.52 -0.77 -1.13 -0.38
-0.14 -3.38 -1.03 -0.76 -0.52 -0.17 -0.17 0.62 -3.92 -4.92 -0.3 -0.16 1.28 0.51 0.62 1.44
-0.57 -1.58 -1.32 -0.93 -0.77 -0.73 -0.32 1.11 1.48 1.49 0.32 -0.4 -0.52 -0.85 -1.79 -0.39
-0.42 0.08 0.19 0.57 0.02 -0.21 0.28 0.36 0.34 0.51 0.34 0.35 -0.68 -1.57 -1.48 -0.64
0.46 -0.21 -1.89 -2.05 -1.58 -0.97 -0.89 -1.0 -0.69 -0.56 -0.94 -0.41 1.26 1.09 0.82 1.33
-0.38 -0.77 0.41 0.9 0.72 0.63 0.49 -0.35 -0.42 -0.5 0.21 -0.09 -0.52 -1.04 -0.94 -0.29
-0.59 0.89 0.82 1.0 1.54 -0.07 -0.05 -0.07 -3.47 -3.24 -0.61 -0.56 -0.75 -1.18 -0.81 -0.28
0.58 0.11 -1.89 -2.58 -0.79 -1.02 -0.01 1.43 -3.17 -3.11 -0.24 0.2 0.73 0.64 -0.26 0.96
-0.63 -0.38 -0.8 -0.55 -0.69 -0.29 0.47 -0.03 0.68 0.21 0.74 0.68 -0.1 -0.54 -0.55 0.26
1.41 0.22 -2.06 -2.14 -1.91 -1.25 -0.88 -1.23 -0.6 -0.12 -0.44 -0.07 0.81 0.72 -0.23 1.35
0.64 -0.66 -1.02 -1.34 -0.48 -0.69 0.72 0.36 0.25 -0.06 0.57 0.24 0.04 -0.3 -0.47 0.34
-0.63 0.22 0.53 0.51 0.06 -0.45 0.14 -0.13 0.18 -0.06 -0.01 0.11 -0.04 -0.43 -0.7 0.06
-1.23 -0.92 -1.97 -1.05 -0.95 -0.58 0.19 1.08 1.23 1.16 1.05 0.55 -0.95 -1.46 -1.47 -0.98
1.3 -0.35 -0.52 -0.58 -1.16 -0.52 0.08 0.11 0.02 -0.03 -0.47 -0.67 0.36 -0.11 -0.17 0.74
0.07 -0.32 -1.33 -1.63 -1.56 -0.64 0.03 0.2 -1.24 -1.46 1.29 1.08 0.66 0.02 -0.75 0.81
-0.03 0.15 0.14 0.73 0.46 0.31 -0.07 -0.79 0.26 0.37 0.52 0.15 -0.73 -1.45 -1.55 -0.59
0.56 0.01 -0.81 -0.47 -0.57 -0.45 0.4 0.65 -0.0 0.16 0.48 0.25 -0.22 -0.7 -0.72 0.2
0.06 -3.02 -0.29 0.03 0.06 0.75 0.24 0.17 -4.31 -2.45 -1.99 -1.24 0.96 0.85 0.12 1.15
-1.02 -1.37 -0.31 -0.1 -0.09 0.27 0.43 0.56 0.32 0.88 0.54 0.18 -0.33 -0.65 -1.29 -0.15
-0.83 -0.18 -0.67 -0.45 -0.5 0.24 0.82 -1.18 -0.52 0.09 1.21 0.79 -0.09 -0.69 -0.93 0.28
0.08 0.16 -0.64 -0.03 -0.3 0.22 -0.0 -0.92 0.22 1.13 0.7 0.61 -0.61 -1.01 -1.34 -0.63
-1.39 0.09 -1.12 -1.03 0.09 -0.31 1.35 0.71 -3.43 -2.84 0.51 1.35 -0.02 -0.73 -0.72 0.21
-0.87 -1.24 0.78 1.31 0.33 0.13 0.44 -0.29 -0.7 -0.29 0.71 0.55 -0.99 -1.4 -1.57 -0.87
-2.89 -1.28 0.71 0.81 0.54 0.16 0.59 0.55 0.63 -0.09 1.11 0.67 -3.44 -4.08 -4.46 -3.59
-0.08 -1.27 -0.38 -0.57 -0.05 0.38 0.27 -0.72 -1.32 -0.65 0.7 0.32 0.84 0.16 -0.16 0.48
-0.15 -0.11 -0.17 0.43 -0.26 -0.0 -0.18 -0.78 0.66 0.84 0.85 0.71 -0.95 -1.34 -1.5 -0.83
-2.82 1.35 0.57 1.19 0.76 0.9 0.66 -0.8 -1.56 -1.31 -0.02 -0.15 -1.34 -2.22 -2.79 -1.15
-0.81 -1.7 -0.2 0.22 -0.07 0.09 0.3 -0.18 0.1 0.22 0.5 -0.07 0.45 -0.07 -0.62 0.48
0.28 -0.16 -2.03 -2.02 -1.49 -1.15 0.14 -0.89 0.16 0.55 0.76 0.41 0.59 0.17 -0.2 0.88
-3.49 -2.41 1.36 1.92 1.06 1.41 -2.12 -2.9 -2.34 -1.27 0.55 0.62 -2.51 -3.35 -3.24 -1.99
0.34 -1.03 -0.28 -0.02 0.54 1.16 0.26 -0.21 -2.35 -2.39 1.22 0.99 -0.99 -1.17 -1.32 -0.67
-0.35 -1.17 0.38 0.47 -0.09 0.91 -0.19 -0.69 -0.23 0.3 0.68 0.64 -0.58 -0.96 -1.09 -0.18
-1.53 -0.43 0.09 0.51 0.08 0.93 -0.2 -0.59 0.4 0.79 0.51 0.55 -0.8 -1.21 -2.07 -0.42
-2.43 -0.59 -1.54 -0.89 -1.03 -0.37 0.24 0.64 1.54 1.34 0.56 0.37 -0.68 -1.47 -1.37 -0.59
0.6 -0.17 0.14 0.63 -0.16 0.03 -0.5 -1.12 0.34 0.51 0.05 0.27 -0.27 -0.7 -0.75 -0.16
0.63 0.63 -1.29 -0.89 -1.82 -1.29 0.12 -0.45 -0.91 0.29 -1.19 -1.07 0.93 0.68 0.11 1.12
0.76 -0.53 -0.96 -0.72 -0.48 -0.18 -0.08 0.01 0.55 0.51 0.43 0.17 0.15 -0.51 -0.49 0.08
-1.94 -2.17 -2.99 -2.82 -2.55 -1.82 -2.56 0.56 2.21 2.66 -1.85 -2.27 -0.99 -1.48 -2.15 -0.63
0.7 -0.37 -0.22 0.14 -0.58 -0.41 0.32 0.4 0.08 0.13 0.47 0.32 -0.43 -0.76 -0.87 -0.02
0.56 0.17 -0.87 -0.73 -0.26 -0.14 -0.13 -0.72 0.32 0.24 0.56 0.24 0.12 -0.16 -0.4 0.21
1.22 -0.08 -1.24 -2.21 -0.77 -1.36 -0.22 -0.79 -0.83 -1.01 -0.47 -0.56 1.07 0.49 0.48 1.21
-0.11 -0.83 -0.42 0.04 -0.51 0.1 -0.34 0.14 -2.37 -2.01 0.24 -0.54 1.05 0.41 0.13 1.18
-2.03 -0.7 0.69 1.11 1.31 1.32 -0.66 -0.72 -2.35 -2.53 0.74 0.35 -1.07 -1.74 -0.93 -0.85
0.56 -0.52 -1.75 -1.3 -0.82 -0.33 0.4 -0.23 -2.05 -0.92 -0.35 -0.15 0.96 0.82 0.31 1.12
0.5 -1.43 -1.35 -1.45 -0.53 -0.15 0.16 -0.09 -0.97 -0.93 1.1 0.35 0.56 0.26 -0.08 0.78
-1.04 -0.4 1.12 1.44 0.84 0.84 -0.1 -1.42 -0.24 -0.39 0.5 0.19 -2.39 -2.82 -2.31 -1.85
-1.05 -2.08 0.5 1.09 0.47 0.33 0.54 -0.93 -1.59 -1.0 1.48 1.21 -1.57 -2.02 -2.38 -1.21
-0.21 -1.06 0.24 0.51 0.37 0.1 0.36 -0.45 0.46 -0.02 0.22 -0.18 -0.2 -0.52 -0.6 0.04
-1.05 -1.16 1.01 0.81 0.38 0.41 0.1 -0.61 -0.12 -0.19 0.82 0.81 -1.3 -1.69 -1.37 -0.91
0.15 -0.47 -1.02 -1.04 -0.63 -0.81 -0.38 -1.18 -0.66 -1.11 -0.64 -0.71 1.1 0.84 0.62 1.55
-3.71 -2.88 -0.94 -0.56 -2.0 -1.71 -3.37 0.06 2.44 2.79 -2.54 -2.38 -4.26 -4.52 -4.9 -3.72
-0.57 -3.45 -0.03 -0.11 0.92 1.63 -0.41 -0.74 -0.29 0.21 0.23 0.49 -0.51 -0.89 -0.98 -0.52
0.86 0.18 -0.16 -0.68 -1.53 -0.95 0.49 -0.47 0.08 0.53 0.46 0.61 -0.22 -0.78 -1.01 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.