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Heatmap: Cluster_168 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.01 -0.39 -0.77 -0.53 -0.94 -0.57 -0.31 -0.54 -0.07 -0.34 0.11 -0.71 0.64 0.29 0.33 0.83
1.05 -0.29 -0.46 -0.29 -0.66 -0.48 0.64 -0.25 -0.2 -0.27 0.2 0.13 -0.08 -0.13 -0.08 0.09
-0.15 -0.8 0.15 0.29 -0.33 -0.08 0.47 -0.18 0.22 -0.06 0.54 0.61 -0.33 -0.32 -0.41 -0.48
-0.23 -1.19 -5.95 -10.64 -0.99 -0.63 0.34 -0.1 0.74 0.74 1.08 0.57 0.38 0.07 -0.5 0.43
0.5 -0.79 -0.24 -0.26 0.13 0.35 0.89 -0.84 -0.35 -0.52 -1.29 -1.43 0.75 0.05 -0.26 0.78
-0.01 -0.94 -2.24 -1.99 -1.57 -1.42 0.17 0.02 0.04 -0.11 0.79 0.22 0.92 0.43 0.13 1.0
1.22 -0.28 -1.76 -1.53 -1.28 -1.49 0.26 0.06 2.0 0.95 -0.61 -0.35 -1.05 -1.27 -1.95 -0.55
-0.75 -0.7 -2.28 -2.02 -1.71 -1.74 0.36 1.03 1.69 1.54 -0.04 -0.35 -0.46 -1.14 -1.17 -0.19
-0.94 -1.43 -3.49 -4.09 -3.75 -3.58 -3.18 1.77 1.91 2.16 -2.6 -3.22 -0.7 -0.59 -0.67 -0.2
0.09 -0.65 -0.89 -0.29 -0.19 -0.03 1.31 -0.25 0.13 0.25 1.01 0.52 -0.83 -1.35 -1.46 -0.48
0.35 -0.35 0.23 0.39 0.19 0.24 -0.0 -0.3 -0.05 -0.08 0.21 0.16 -0.47 -0.47 -0.27 -0.21
0.42 -0.21 -0.26 -0.19 -0.13 -0.16 0.17 -0.3 0.34 0.19 0.18 0.29 -0.17 -0.16 -0.21 -0.1
0.11 -1.29 -1.23 -1.13 -0.6 -0.51 0.54 -0.0 0.06 0.22 0.63 -0.18 0.47 0.29 0.01 0.65
-0.06 -1.51 -0.48 0.11 -0.23 -0.18 0.88 0.2 -0.54 -0.79 0.64 0.4 0.12 -0.17 -0.25 0.28
-0.88 0.22 -2.07 -1.83 -1.42 -1.64 -0.03 2.3 1.05 1.37 -0.22 -0.18 -2.58 -2.02 -2.23 -2.56
1.02 0.42 -0.83 -0.62 -0.63 -0.37 -0.07 -0.94 -0.24 -0.87 0.2 0.13 0.37 0.25 0.31 0.24
0.4 0.55 -1.19 -0.91 -0.87 -1.06 0.09 0.03 0.56 0.63 0.99 0.72 -0.41 -0.96 -1.33 -0.29
-0.19 0.86 -0.2 -1.01 0.05 0.08 0.24 -0.24 -1.31 -1.49 0.02 0.1 0.39 0.3 0.33 0.23
0.45 -0.57 0.62 0.7 0.33 0.7 -0.85 0.06 0.59 0.06 0.29 0.51 -1.85 -1.94 -1.98 -1.58
0.69 0.02 -1.47 -1.88 -1.05 -1.03 0.71 -0.21 0.14 -0.04 0.84 0.76 -0.09 -0.25 -0.79 0.45
-1.38 -4.24 0.89 1.22 0.27 -0.46 0.57 -1.75 -1.43 -0.51 0.91 1.31 -0.58 -0.81 -1.35 -0.69
0.33 0.15 -0.81 -0.46 -0.82 -0.61 0.12 -0.25 0.1 -0.2 0.39 0.37 0.41 0.24 -0.11 0.28
-0.31 -2.3 1.14 1.7 0.34 1.41 -0.59 -1.8 -3.05 -2.59 -0.0 -0.32 -0.43 -0.79 -1.02 -0.4
0.78 -0.22 -1.13 -1.38 -0.71 -0.34 -0.27 -0.29 -0.26 -0.62 0.07 -0.58 0.68 0.66 0.55 0.75
0.69 -0.98 -0.51 -0.14 -0.2 -0.01 0.31 -0.55 -0.04 0.59 0.65 0.1 -0.15 -0.35 -0.44 -0.11
2.76 -1.74 -4.22 -3.6 -1.45 -2.07 -1.99 1.14 -0.33 0.58 -1.48 -1.8 -0.43 -0.5 -0.8 -0.35
-0.98 -0.21 -0.11 0.24 0.12 -0.16 0.57 0.3 0.23 -0.06 0.57 0.53 -0.41 -0.71 -1.0 -0.13
0.46 -1.02 -1.09 -1.45 -0.84 -0.3 0.16 -0.37 0.34 0.34 0.47 0.04 0.45 0.23 0.33 0.38
0.51 -0.75 -0.35 -0.15 -0.13 0.07 0.33 -0.44 0.56 0.41 0.57 0.31 -0.54 -0.64 -0.39 -0.47
0.52 0.08 -0.47 -0.17 -0.22 0.23 0.07 -1.01 0.75 0.67 0.68 0.39 -0.79 -1.15 -0.91 -0.78
-0.2 0.43 -1.93 -1.68 -1.84 -0.45 -0.62 -1.13 1.4 0.39 0.81 0.61 0.2 -0.06 -0.69 0.19
0.22 0.42 -0.22 0.01 0.48 0.38 0.64 -0.44 -0.33 -0.41 0.54 0.43 -0.61 -0.97 -0.89 -0.76
-0.27 -0.59 -0.55 -0.59 -0.39 -0.25 0.61 0.43 0.46 0.22 0.49 0.39 -0.2 -0.29 -0.59 0.09
1.08 -1.0 -1.39 -1.75 -1.22 -0.84 -0.16 -0.67 -1.47 -0.88 -0.6 -0.64 1.02 1.1 0.68 1.14
-0.42 1.01 1.34 1.18 0.31 0.06 -0.58 -1.27 -0.44 -1.2 -0.59 -0.28 -0.48 -0.95 -1.09 -0.51
0.97 0.2 -2.15 -2.33 -1.53 -0.96 0.53 -0.03 -1.02 -0.66 0.13 -0.33 0.81 0.57 0.15 0.86
0.55 -0.79 -0.98 -1.06 -0.55 -0.48 0.18 -0.84 -0.29 0.62 0.79 -0.19 0.34 0.24 0.03 0.55
-0.04 -0.22 -1.95 -1.64 -1.48 -0.84 0.82 0.67 0.83 0.61 0.63 -0.48 -0.14 -0.29 -0.83 0.55
0.68 0.09 -0.57 -0.87 -0.1 -0.27 0.72 -0.46 -0.4 -0.11 0.82 0.32 -0.05 -0.74 -1.03 0.29
0.12 0.27 -2.06 -2.71 -1.14 -1.45 -0.91 -0.61 -2.79 -3.13 -3.22 -1.64 1.46 1.45 1.08 1.59
0.83 -2.11 -1.32 -2.08 -0.6 -0.42 -0.65 -0.34 - -6.64 -3.48 -2.81 1.63 1.32 0.69 1.62
0.52 0.8 -1.29 -1.23 -0.1 0.32 0.12 -0.93 0.06 -0.41 0.19 0.29 0.33 -0.19 -0.52 0.29
0.52 -0.72 0.32 0.43 -0.11 -0.34 0.61 -0.26 -0.33 -0.94 0.35 0.67 -0.18 -0.27 -0.82 -0.28
0.88 -0.57 -1.6 -1.44 -1.13 -0.88 -0.05 -0.76 -0.09 -0.13 0.2 -0.2 0.79 0.48 0.38 0.96
0.48 -0.26 -1.48 -0.39 -0.63 -0.59 0.72 0.24 0.58 0.34 0.0 -1.23 0.27 -0.19 -0.18 0.45
-0.04 -0.6 -1.53 -1.29 -1.37 -1.12 0.53 0.16 0.12 0.26 0.84 0.89 0.22 0.2 -0.28 0.19
0.28 0.09 -0.88 -0.64 -0.71 -0.58 0.26 -0.33 1.14 0.94 0.59 0.97 -1.17 -1.24 -1.83 -0.89
-0.2 -1.04 0.38 0.5 -0.02 -0.79 0.86 0.44 -0.6 -1.22 -0.22 -1.02 0.59 0.07 -0.66 0.64
0.01 -2.5 0.0 -1.01 0.8 0.23 0.47 0.36 -7.76 -8.06 -0.93 1.16 0.39 0.13 0.45 0.27
0.33 -0.06 -1.4 -1.66 -1.0 -1.49 0.71 0.09 0.33 0.54 0.73 0.52 0.23 -0.19 -0.86 0.18
-1.07 -0.69 -3.17 -2.98 -3.06 -2.52 -1.18 0.01 2.09 2.43 -2.06 -1.75 -0.5 -0.61 -0.76 -0.39
0.5 0.36 -1.87 -2.16 -2.28 -1.34 0.1 -0.93 -0.32 -0.46 0.55 0.11 0.78 0.58 0.43 0.98
0.33 -3.5 -0.93 -2.59 -1.09 -1.24 -0.41 0.16 -8.46 - -3.13 -2.06 1.54 1.4 1.07 1.68
-0.1 0.51 -0.04 0.07 -0.38 -0.16 0.04 -0.44 0.01 -0.64 -0.0 0.03 0.21 0.13 -0.18 0.47
0.83 -1.87 -0.54 -0.86 -0.44 -0.22 -0.56 -0.28 -0.92 -1.24 -0.14 -0.7 0.85 0.59 0.86 1.0
-0.9 -1.63 -0.15 0.03 -0.45 -0.25 -0.01 -0.03 0.82 0.51 0.31 -0.27 0.32 0.04 -0.05 0.24
2.09 -0.74 -1.95 -1.7 -1.86 -1.09 0.1 -0.57 -1.2 -1.24 -0.5 -0.22 0.7 0.58 0.07 0.59
-0.37 0.16 -1.4 -1.2 -1.28 -1.18 0.54 0.05 0.85 0.8 0.69 0.56 -0.15 -0.41 -0.81 0.12
0.48 0.14 -0.34 -0.52 -0.41 -0.43 0.33 -0.5 0.58 0.39 0.25 0.71 -0.6 -0.64 -0.49 -0.13
0.26 0.29 -0.85 -0.34 -0.22 0.34 0.62 0.01 -0.09 -0.28 -0.44 -0.64 0.28 0.12 -0.1 0.25
-1.08 -0.43 0.61 0.69 0.93 1.01 0.49 -0.36 -0.18 -0.42 0.35 -0.05 -0.99 -1.54 -1.63 -1.02
0.54 -0.44 -0.78 -0.74 -0.6 -0.46 0.3 -0.34 -0.27 0.26 -0.04 -0.41 0.44 0.3 -0.04 0.93
0.7 -0.28 0.1 0.14 0.24 0.45 0.12 -1.25 -0.6 0.39 0.28 -0.28 -0.29 -0.47 -0.66 0.19
0.32 -0.72 -0.63 -1.07 -0.38 -0.25 0.39 -0.57 -0.05 0.34 0.75 0.38 0.25 -0.19 0.23 -0.04
0.4 -0.71 -1.12 -1.89 -0.96 -0.79 -0.14 -0.83 -1.92 -1.48 -0.14 -0.73 1.05 1.09 1.03 1.26
0.08 -0.13 -2.35 -2.37 -1.87 -1.61 0.07 -0.3 0.75 0.68 0.11 0.14 0.72 0.46 -0.1 0.81
0.69 -0.01 -0.6 -0.48 -0.41 -0.17 0.07 -0.85 0.47 0.5 0.67 0.54 -0.52 -0.49 -0.72 -0.14
2.19 -0.58 0.1 -0.24 0.24 -0.02 0.53 -0.79 -0.36 0.61 -0.26 -0.24 -2.55 -2.6 -2.49 -2.55
1.3 -0.52 -2.34 -2.7 -2.22 -1.3 0.11 -1.05 -2.33 -1.41 0.25 -0.15 0.96 0.79 0.75 1.18
-0.43 -0.5 0.62 0.99 0.01 0.7 0.37 -1.02 -1.06 -0.44 0.43 0.06 -0.49 -0.68 -0.54 -0.03
1.46 1.14 -0.96 -1.02 -0.69 -0.45 0.29 -0.78 -0.13 -0.22 0.36 0.6 -0.79 -0.7 -1.1 -0.61
0.66 0.5 -1.2 -0.53 -0.96 -0.71 0.56 -0.11 0.56 0.38 0.32 0.19 -0.16 -0.6 -0.67 0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.