Heatmap: Cluster_65 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G042100.1	-1.0	3.69	-	-1.34	-	-	-	-	-2.08	-	0.34	-0.5	-	-	-	-
Sobic.001G054400.1	-	-	3.06	2.32	-0.95	-1.12	-	-	-3.51	-	0.5	-2.52	-	-	-	-
Sobic.001G108300.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G121850.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G176600.1	-	-	-4.26	-1.69	-0.89	-2.1	0.34	-3.06	2.1	-0.97	2.37	1.82	-	-	-	-
Sobic.001G183300.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G184000.1	-9.59	-	0.17	0.2	1.78	1.5	-4.85	-2.11	1.87	0.56	0.29	-0.22	-	-	-	-
Sobic.001G203300.1	-1.42	0.58	1.58	0.95	2.54	1.49	-4.51	-5.25	-	-	-2.31	-1.78	-	-	-	-
Sobic.001G256600.2	-	3.19	-	-	2.78	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G261565.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G272800.2	-5.46	-	1.26	2.24	1.75	0.45	1.3	-3.73	-	-	-0.69	-0.02	-	-	-	-
Sobic.001G293900.1	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G378400.1	-	3.58	-	-	-	-	-	-	-	-	-	2.03	-	-	-	-
Sobic.001G400800.1	-10.18	-9.95	2.12	1.39	1.71	0.39	-3.19	-7.22	-3.98	-6.12	-0.05	1.72	-	-	-	-
Sobic.001G409000.1	-	3.82	-2.83	-1.49	-1.12	-0.54	-3.51	-2.92	-	-	-	-	-	-	-	-
Sobic.001G535300.1	1.32	3.25	-0.62	-0.57	-1.0	-1.23	-6.05	-	-3.19	-4.72	-0.68	-0.03	-	-	-	-
Sobic.002G011600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G012500.1	-	-	0.69	-1.41	1.51	0.04	3.23	-4.29	-	-	-1.34	-1.7	-	-	-	-
Sobic.002G034200.4	-	3.92	-	-	-	-	-	-	-	-	-	-	-	-0.27	-	-
Sobic.002G044800.1	-	-2.93	1.08	0.54	-0.66	1.76	-1.46	-	1.9	1.72	-0.71	-1.81	-	-	-	-
Sobic.002G079500.1	-	-	-	-	-	-	-	-3.85	2.09	3.55	-	-	-	-	-	-
Sobic.002G089100.1	-3.12	-	0.45	0.54	-0.08	-0.59	0.14	-1.18	-0.13	-0.29	1.92	2.13	-	-	-	-
Sobic.002G100200.1	-	-	-0.4	-1.39	-	-1.75	-	-	-1.15	0.23	3.15	2.01	-	-	-	-
Sobic.002G106700.1	-	-	-	-	2.81	0.31	-	-	-	-	2.01	1.9	-	-	-	-
Sobic.002G107800.2	-	-6.96	-0.91	0.53	2.17	2.56	-4.64	-5.43	0.06	-3.1	-0.67	0.84	-	-	-	-
Sobic.002G107900.1	-	-	-1.68	-0.27	2.51	1.72	-	-3.29	2.28	-3.71	-1.26	-1.2	-	-	-	-
Sobic.002G120601.1	-	-	-	-	-	1.34	-0.3	0.52	-	-	-	-	-	1.19	-	3.16
Sobic.002G126900.1	2.12	3.54	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G135300.2	-	-	1.49	-	-	-	-	2.24	2.05	2.11	-	-	-	-	-	-
Sobic.002G164833.1	-	-	3.08	2.44	-	1.08	-	-	-	-	-	-	-	-	-	-
Sobic.002G204800.1	-2.04	-3.08	1.16	1.91	2.54	1.45	-	-2.68	-	-	-0.68	-1.77	-	-	-	-
Sobic.002G208850.1	-	-	2.82	3.16	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G327400.1	-6.83	-	1.79	1.75	1.62	2.36	-0.54	-4.83	-	-4.12	-2.48	-5.18	-	-	-	-
Sobic.002G357950.1	2.62	-	-	-	-	-	-	-	-	-	-	-	-	3.3	-	-
Sobic.002G397700.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G009700.1	-	-	-	-3.42	-5.79	-4.64	-4.6	2.61	2.41	2.1	-4.26	-5.36	-	-	-	-
Sobic.003G065900.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G164000.1	-	-	-	-	-	-	-	-	2.23	2.7	0.74	1.64	-	-	-	-
Sobic.003G175833.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G215300.2	-7.84	-10.17	0.14	-1.32	1.76	0.49	3.22	-4.68	-7.53	-	-2.22	-2.86	-	-	-	-7.88
Sobic.003G217566.1	-	-	-	3.62	-	-	-	1.88	-	-	-	-	-	-	-	-
Sobic.003G307300.1	-	-	1.54	2.63	0.07	0.94	1.28	-	-	-	-	0.57	-	-	-	-
Sobic.003G335601.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G414000.1	-	-	2.68	-	-	-	-	-	3.26	-	-	-	-	-	-	-
Sobic.004G014300.1	3.08	-	-	-	2.91	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G022300.1	-	3.17	-	-	-	-	-	-	-	-	1.46	2.08	-	-	-	-
Sobic.004G090100.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G129201.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G130916.1	-	-	3.04	2.55	-	0.97	-	-	-	-	-	-	-	-	-	-
Sobic.004G164650.1	-	-	-	1.71	0.16	-1.2	2.29	2.56	-	-	-1.4	-	-	-	-	-
Sobic.004G277700.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G304625.1	-	-	-0.28	0.54	-0.3	2.23	-2.27	-	0.79	-	2.4	-0.45	-	-1.79	-	-
Sobic.004G311750.1	2.87	3.04	-1.12	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G351932.1	3.52	-	-	-	-	-	-	2.17	-	-	-	-	-	-	-	-
Sobic.005G060900.2	-	-	0.33	0.81	-0.35	1.46	-5.65	-5.58	-2.48	-4.85	2.38	1.99	-	-	-	-
Sobic.005G109400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G129000.1	-	-	-	-	-	-	-	-2.05	2.38	3.4	-	-	-	-	-	-
Sobic.005G132250.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G147700.2	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G169000.1	-	-	-	-	-	-	0.87	1.0	-	-	3.61	-	-	-	-	-
Sobic.005G171300.1	-	-	-	-	-	-7.18	-5.23	-0.1	2.39	3.25	-1.96	-4.26	-	-	-	-
Sobic.005G190700.1	-	-	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-
Sobic.006G007900.1	-	-	-0.2	-2.59	3.22	0.49	1.89	-6.61	-	-	-1.83	-2.18	-	-	-	-
Sobic.006G026100.2	-	-	-3.44	-4.95	-3.2	-1.29	-2.68	-1.97	1.57	3.21	0.89	-0.22	-	-	-	-
Sobic.006G030600.2	-	-3.27	1.01	0.91	-0.37	-0.37	-1.73	-1.4	0.93	1.84	1.53	0.47	-	-	-	-
Sobic.006G040301.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G055501.1	-	-	-	0.56	-	-1.13	-	3.43	-0.52	-1.46	1.16	-	-	-	-	-
Sobic.006G131100.1	-2.52	3.83	-1.68	-0.35	-	-	-2.36	-1.54	-	-	-	-	-	-	-	-
Sobic.006G152400.2	-2.4	-	-	-	2.96	3.0	-	-	-	-	-	-	-	-	-	-
Sobic.006G200400.1	3.56	-	-	-	-	-	-	-	-	2.06	-	-	-	-	-	-
Sobic.006G273150.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G055100.1	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-
Sobic.007G064800.1	-5.17	-	0.0	-1.06	-0.93	-	-0.3	-0.37	0.99	3.01	1.18	-3.83	-	-	-	-
Sobic.007G080100.1	-	2.38	2.93	1.67	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G120301.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G122800.1	-10.64	-	1.81	1.25	0.77	2.52	-2.06	-6.49	-8.52	-6.7	0.34	0.2	-	-9.6	-	-
Sobic.007G137201.1	-	-	0.45	3.59	-	-0.58	-0.22	-	0.04	-	-	-	-	-	-	-
Sobic.007G141001.1	-	-0.44	1.91	2.16	0.87	0.18	1.12	0.49	-4.61	-3.55	-2.19	-2.62	-	-	-	-
Sobic.007G147300.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G199200.1	-	3.34	-	-	-	-	-	-	2.56	-	-	-	-	-	-	-
Sobic.008G009200.1	-	-	2.13	-0.0	-0.2	2.09	-	-2.4	2.24	-0.7	-	-	-	-	-	-
Sobic.008G064400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G081000.2	3.51	2.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G112700.1	-	-	-	2.39	2.19	-	-	-	-	-	-	2.63	-	-	-	-
Sobic.008G144701.1	1.18	3.26	-	-	-1.68	-	-	-	0.77	-1.17	-1.14	0.34	-	-	-	-
Sobic.009G031900.1	-	-	2.73	2.32	0.69	1.04	-3.92	-	-	-	-3.57	-0.86	-	-	-	-
Sobic.009G064400.1	1.26	-5.43	1.46	1.2	0.88	1.88	-4.32	-2.46	0.54	-0.65	-1.37	-1.65	-	-	-	-
Sobic.009G091600.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G150500.1	-	-2.95	1.03	1.42	1.56	2.68	-0.72	-	-1.79	-1.73	-0.7	-	-	-	-	-
Sobic.009G164800.2	3.47	1.6	-	-	-0.2	-1.35	-	-	-	-	-0.63	-	-	-	-	-
Sobic.009G216200.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G014850.1	-	2.74	-	-	-	-	-	-	-	-	-	-	-	3.22	-	-
Sobic.010G033750.1	-	-	2.68	-	-	-	-	-	3.26	-	-	-	-	-	-	-
Sobic.010G043300.2	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G116650.1	1.48	-	1.92	3.12	-	-0.42	-	-	-	-	-	-	-	-	-	-
Sobic.010G133000.1	-	-1.87	-2.6	-	-3.47	1.18	-4.27	-0.74	3.53	-	-0.6	-1.44	-	-	-	-
Sobic.010G140200.1	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G180550.1	-	-	1.94	1.96	-0.26	2.18	-1.05	-	-	-	0.32	0.21	-	-	-	-
Sobic.010G194801.1	-	-	-	-	-	-	-	-	-	-	-	4.0	-	-	-	-
Sobic.010G229075.1	-	-	-	2.11	2.48	2.33	-	0.09	-	-	-	-	-	-	-	-
Sobic.010G245500.1	-10.98	3.94	-4.81	-3.52	-4.58	-1.28	-4.71	-8.65	-4.94	-7.52	-7.9	-7.59	-	-	-	-
Sobic.010G262700.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.