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Heatmap: Cluster_231 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
24.16 18.32 16.12 15.9 11.69 13.44 7.23 4.89 5.77 2.28 9.44 12.72 8.14 11.55 4.85 7.02
62.32 219.87 118.54 127.18 159.61 152.06 110.31 100.66 128.24 95.97 94.94 142.69 49.66 52.87 37.66 62.63
9.22 8.41 2.68 1.8 2.08 2.98 9.17 33.68 56.85 91.31 6.43 5.84 14.79 13.51 11.07 18.31
59.1 48.14 22.77 36.79 37.94 28.07 47.76 25.26 36.15 31.84 46.45 50.62 50.8 42.4 40.1 52.49
40.01 121.86 37.36 42.89 48.62 82.24 75.6 127.21 201.45 143.03 32.19 45.23 33.06 27.97 26.27 35.08
590.76 742.26 643.67 792.4 670.69 537.48 663.75 257.24 1109.08 1537.11 664.22 604.97 135.07 137.96 101.46 191.51
41.01 17.58 8.31 8.38 11.29 17.62 37.71 15.77 23.65 32.56 52.84 33.36 30.0 33.25 27.75 38.77
12.61 10.58 39.56 29.38 47.49 44.21 27.68 23.56 8.91 12.64 28.47 31.5 13.86 10.42 14.84 10.43
32.77 11.63 7.43 10.06 7.93 7.52 18.31 17.68 12.4 12.34 23.46 16.54 18.88 16.5 17.05 21.1
37.74 20.27 14.34 25.62 20.41 32.39 41.87 25.55 5.17 33.76 79.48 68.58 35.32 40.77 34.71 56.15
66.78 28.04 60.52 93.25 70.55 55.98 124.5 156.95 167.92 119.17 109.01 79.11 71.23 73.0 52.09 79.63
25.6 18.17 9.51 8.02 10.74 14.27 20.19 15.0 19.97 19.01 25.35 21.4 16.3 13.17 12.97 16.57
26.32 14.02 12.85 16.78 9.39 10.79 12.6 9.53 10.79 10.62 9.38 7.64 18.42 15.94 15.38 20.66
64.73 32.41 45.72 43.18 49.8 55.72 145.28 53.79 81.34 92.75 136.16 123.41 61.69 44.44 36.1 79.41
158.08 194.22 79.85 77.28 183.08 172.13 210.75 225.01 11.37 4.87 288.21 280.0 205.51 164.36 197.57 205.06
33.91 6.19 9.75 13.03 15.76 17.31 37.71 25.98 4.46 5.34 50.59 37.08 34.63 41.29 34.03 42.76
199.0 151.82 104.51 112.94 91.67 92.07 264.16 138.88 253.93 206.85 225.91 243.42 95.58 110.31 99.82 112.36
99.51 75.49 58.45 79.63 55.73 62.28 85.19 51.39 64.45 62.81 83.2 58.72 44.37 42.67 33.63 51.78
48.38 324.69 61.3 103.64 102.29 138.31 226.08 51.19 290.66 477.2 331.7 345.82 55.87 56.63 42.7 54.93
31.69 46.7 16.07 18.9 14.49 26.08 85.97 77.07 108.8 97.0 58.22 46.57 34.46 34.15 25.87 42.22
53.48 53.48 44.79 49.02 39.97 49.85 32.86 19.72 47.48 53.13 73.68 59.02 25.0 26.1 22.43 32.37
1.62 6.87 2.6 4.01 5.0 4.27 4.9 1.9 1.53 0.93 2.13 2.04 2.98 2.78 1.85 3.0
42.0 11.33 2.94 2.28 4.68 5.0 11.68 14.14 18.52 13.5 16.55 10.09 20.3 14.04 12.14 20.95
195.47 248.46 70.51 99.54 101.62 133.21 176.14 77.95 186.16 272.56 219.32 251.76 116.65 132.28 77.64 157.08
217.66 206.09 183.85 223.17 149.95 146.47 326.66 197.67 264.33 311.76 267.9 281.5 153.62 147.62 131.19 183.38
8.96 5.98 1.37 0.79 4.15 3.42 5.35 4.42 0.38 0.23 1.02 1.49 9.85 11.13 10.18 11.55
38.96 42.39 20.64 22.87 32.05 32.69 60.05 35.5 36.52 42.2 53.51 54.04 18.87 14.78 16.39 22.15
70.34 43.2 17.98 22.0 36.17 31.43 41.62 44.74 46.43 42.28 66.25 70.73 68.76 66.59 52.98 69.19
396.72 246.65 154.12 167.58 147.25 120.59 332.62 215.29 178.69 140.69 221.7 283.62 120.03 101.52 119.27 128.14
64.39 75.28 22.17 31.53 20.78 32.22 71.47 188.4 332.23 536.11 38.14 45.88 95.02 87.15 77.23 99.9
39.99 39.65 12.0 14.8 9.67 15.66 23.58 76.4 146.76 58.05 22.36 19.01 13.98 13.0 10.59 15.15
32.37 31.59 3.29 0.05 37.18 38.22 56.61 24.07 27.9 20.6 45.75 41.15 37.33 28.91 31.4 39.58
2.06 1.45 1.4 2.12 1.23 2.65 5.12 1.67 2.74 1.84 2.48 1.94 6.24 6.0 4.51 6.91
17.93 18.95 11.65 6.26 14.54 10.51 10.44 270.9 204.77 200.91 6.52 6.39 16.93 19.17 18.9 23.98
95.19 57.63 16.7 19.25 24.65 24.9 18.14 69.99 90.76 107.64 28.92 34.38 34.65 36.57 31.41 43.15
93.34 60.87 38.78 59.56 51.81 65.58 115.57 60.18 105.36 98.83 114.25 88.23 48.23 49.35 43.67 56.12
122.79 120.55 35.95 25.76 39.8 39.66 54.97 36.87 34.05 37.74 30.11 46.41 90.5 83.55 77.17 109.22
18.78 4.48 5.87 6.88 9.83 12.22 13.03 10.36 0.67 0.37 14.39 13.11 22.31 20.21 10.47 25.18
10.72 9.25 2.81 1.13 3.14 3.23 4.29 7.6 0.42 0.43 0.49 1.03 18.53 18.18 13.74 19.63
26.08 21.46 5.88 5.61 8.24 6.53 22.93 13.82 13.92 12.18 6.43 8.28 26.32 25.16 22.49 26.0
2.69 4.31 5.8 9.72 12.54 9.06 20.59 47.61 32.82 29.14 8.13 10.75 13.1 10.58 8.27 14.45
25.16 13.48 11.55 6.52 10.62 13.3 24.82 11.92 14.05 21.82 27.04 27.89 23.2 22.87 23.22 32.63
124.47 207.49 91.13 108.84 95.22 90.97 155.01 150.74 263.81 198.0 140.1 161.26 126.1 117.22 104.43 134.41
24.6 34.84 2.54 4.16 4.1 6.14 8.38 35.06 66.33 115.48 30.77 14.65 45.41 40.49 21.47 54.53
35.09 20.69 49.15 49.59 62.15 64.23 50.91 38.83 40.45 31.61 37.41 47.78 27.47 31.56 32.79 29.17
279.71 96.35 27.56 43.91 56.55 68.41 140.23 102.89 250.56 222.41 163.4 170.23 76.79 80.75 74.1 95.03
73.95 90.06 31.79 35.66 36.08 55.47 49.52 37.73 84.28 123.02 181.69 131.47 35.5 43.65 38.85 40.22
59.35 52.03 69.55 89.4 80.45 108.4 54.06 35.06 60.74 44.42 106.17 110.68 40.93 52.63 36.31 62.68
84.78 58.34 539.01 594.53 381.76 361.34 106.25 78.09 20.89 27.13 181.51 171.15 31.52 28.7 33.68 39.47
138.45 70.84 50.04 36.71 60.98 61.96 82.66 44.09 72.85 65.24 103.11 123.23 65.67 64.93 62.28 72.79
72.62 48.16 21.04 21.62 25.9 25.61 50.42 40.67 55.68 51.29 51.15 49.41 27.96 23.34 23.23 30.85
79.28 21.43 12.94 9.68 13.17 19.06 40.24 19.22 20.89 24.2 39.67 28.74 66.54 63.45 55.92 76.97
9.3 11.01 1.41 1.77 1.83 3.19 7.15 9.52 6.0 6.08 6.95 4.5 14.86 14.24 10.39 18.76
110.78 65.8 89.97 54.03 105.22 91.63 138.22 74.72 97.6 97.49 147.4 118.85 73.6 66.71 59.55 71.96
0.0 0.0 7.11 7.54 0.0 0.0 9.77 6.91 20.17 24.18 13.0 15.22 5.33 1.66 9.48 4.89
16.64 9.95 38.07 57.9 63.89 61.05 73.5 31.79 16.39 23.5 28.73 24.78 8.27 6.88 7.38 7.95
83.69 72.42 38.39 42.44 43.4 38.05 67.81 41.01 29.35 21.76 31.71 30.88 81.5 80.56 85.67 96.58
50.41 24.89 8.58 5.85 11.45 15.26 21.0 12.06 0.05 0.05 1.76 4.12 62.07 60.86 60.0 67.32
55.91 74.4 23.38 26.42 27.11 32.97 44.37 30.12 68.83 56.95 59.07 70.42 35.29 42.13 29.12 54.7
31.34 117.43 27.33 24.04 22.82 64.41 33.59 40.38 27.88 17.35 37.46 44.98 14.61 12.29 10.64 18.15
76.58 53.27 569.7 694.54 567.03 549.41 173.91 52.08 68.53 101.33 306.08 231.46 24.95 26.12 24.68 32.5
5.55 24.25 21.32 40.14 37.1 66.19 134.64 49.58 206.38 144.2 163.81 98.25 30.9 29.31 24.63 34.5
256.89 120.87 109.89 95.28 144.03 143.16 236.91 120.55 172.32 126.95 199.2 212.77 160.15 156.16 176.13 148.11
56.12 46.65 6.12 4.19 8.31 8.95 18.81 38.07 19.23 4.89 22.53 17.82 56.97 56.34 41.83 60.21
144.96 44.17 63.21 48.61 64.42 77.02 65.68 35.57 33.58 43.62 43.52 40.9 87.92 88.37 90.41 92.08
26.02 4.34 12.66 10.34 16.16 16.3 48.83 21.71 13.18 14.63 43.51 27.27 67.35 61.17 58.02 65.22
51.16 29.81 29.11 30.26 22.18 23.03 97.52 60.15 78.39 61.43 79.5 89.84 62.69 49.78 49.09 65.71
19.18 17.14 5.22 2.47 8.58 8.09 22.48 21.04 13.79 11.1 20.44 13.04 14.44 13.95 13.27 16.71
27.79 10.87 4.73 4.97 6.85 9.74 17.94 13.69 8.32 6.55 16.77 10.69 23.78 17.16 11.05 25.7
5.55 5.22 2.45 1.06 2.02 3.54 2.85 4.34 31.11 40.9 6.51 9.3 9.49 9.68 6.46 15.3
463.02 96.3 70.81 41.83 82.31 70.88 146.55 86.3 14.77 7.63 48.32 103.74 172.83 161.59 137.66 186.37
188.96 218.54 101.79 113.09 105.31 124.08 254.09 130.34 196.89 149.13 284.1 273.1 83.99 79.96 72.65 89.61
57.84 54.12 30.46 31.34 56.68 69.82 68.3 23.65 22.44 9.21 106.19 123.25 51.58 50.72 38.23 50.35
19.45 19.2 13.9 7.31 15.16 12.93 23.63 7.56 1.3 2.3 6.43 9.73 21.0 20.44 19.26 20.1
81.81 54.45 75.08 109.52 95.46 207.11 63.43 40.09 37.29 35.81 82.73 67.24 42.44 41.85 43.49 48.01
33.55 16.41 12.35 18.97 8.36 18.21 30.15 23.2 42.42 41.03 28.75 14.31 21.02 20.65 19.47 30.2
49.23 105.15 30.73 32.33 55.99 55.67 69.1 48.13 104.72 68.84 65.42 57.31 30.6 31.4 23.74 34.62
23.06 99.14 414.32 265.5 93.05 92.7 12.63 48.86 8.44 2.87 67.05 53.29 101.4 74.9 168.42 137.99
19.44 45.4 14.82 6.84 14.54 11.23 9.57 6.61 4.25 3.28 6.29 6.52 19.82 26.56 32.35 26.51
45.32 192.22 10.57 14.78 19.25 17.66 57.94 19.47 28.67 41.27 38.18 30.44 27.42 28.12 25.46 38.3
16.5 10.68 5.87 4.09 7.06 9.86 20.17 23.27 30.05 31.86 16.82 16.39 21.05 21.97 21.99 28.51
40.05 26.2 64.02 58.92 16.75 19.91 81.79 72.51 105.42 153.62 142.02 119.38 47.35 40.32 36.89 43.33
96.47 58.87 60.91 63.58 57.94 67.34 48.49 32.27 33.67 19.28 29.01 39.52 41.06 37.07 42.31 44.82
27.37 7.6 11.45 6.21 11.86 11.83 16.41 27.57 0.18 0.45 6.64 16.13 35.71 35.12 22.68 38.7
54.59 51.48 24.51 27.36 25.28 26.98 42.05 28.93 31.18 23.35 41.72 37.95 35.17 39.27 31.87 36.86
37.58 28.43 24.5 23.03 26.68 25.54 47.51 25.41 27.76 27.02 30.46 26.16 23.6 20.34 11.65 20.37
33.56 33.26 24.34 27.88 32.35 22.48 48.96 26.12 26.5 25.69 35.46 28.01 42.86 33.23 28.29 45.95
103.66 129.5 238.1 244.34 211.8 206.7 135.08 92.52 34.21 39.05 106.67 118.69 105.28 82.72 72.3 98.38
13.46 1.21 0.56 0.58 1.38 1.06 2.68 1.84 0.11 0.22 2.03 1.14 9.05 7.44 6.47 7.05
119.52 111.67 53.55 62.61 72.6 75.37 290.46 171.93 232.18 187.78 300.46 282.25 118.42 124.57 111.72 155.71
50.51 29.67 28.73 34.6 30.61 34.46 52.25 26.78 34.78 32.23 64.12 54.17 34.4 34.83 28.27 37.92

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)