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Heatmap: Cluster_231 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.16 0.76 0.57 0.55 0.11 0.31 -0.58 -1.15 -0.91 -2.25 -0.2 0.23 -0.41 0.09 -1.16 -0.63
-0.78 1.04 0.15 0.25 0.57 0.5 0.04 -0.09 0.26 -0.16 -0.18 0.41 -1.11 -1.02 -1.51 -0.78
-0.97 -1.1 -2.75 -3.32 -3.11 -2.59 -0.97 0.9 1.66 2.34 -1.49 -1.63 -0.28 -0.41 -0.7 0.02
0.53 0.23 -0.85 -0.16 -0.11 -0.55 0.22 -0.7 -0.18 -0.37 0.18 0.3 0.31 0.05 -0.03 0.35
-0.81 0.8 -0.91 -0.71 -0.53 0.23 0.11 0.86 1.52 1.03 -1.12 -0.63 -1.08 -1.32 -1.41 -1.0
0.01 0.34 0.13 0.43 0.19 -0.13 0.18 -1.19 0.92 1.39 0.18 0.05 -2.12 -2.09 -2.53 -1.61
0.61 -0.61 -1.69 -1.68 -1.25 -0.61 0.49 -0.77 -0.18 0.28 0.98 0.31 0.16 0.31 0.05 0.53
-0.86 -1.11 0.79 0.36 1.05 0.95 0.27 0.04 -1.36 -0.86 0.32 0.46 -0.72 -1.14 -0.62 -1.13
1.06 -0.43 -1.08 -0.64 -0.99 -1.06 0.22 0.17 -0.34 -0.35 0.58 0.07 0.26 0.07 0.12 0.42
0.08 -0.82 -1.32 -0.48 -0.81 -0.14 0.23 -0.48 -2.79 -0.08 1.15 0.94 -0.02 0.19 -0.04 0.65
-0.4 -1.65 -0.54 0.08 -0.32 -0.65 0.5 0.83 0.93 0.44 0.31 -0.15 -0.3 -0.27 -0.76 -0.14
0.62 0.13 -0.81 -1.05 -0.63 -0.22 0.28 -0.15 0.26 0.19 0.61 0.36 -0.03 -0.34 -0.36 -0.01
0.93 0.02 -0.1 0.28 -0.56 -0.36 -0.13 -0.54 -0.36 -0.38 -0.56 -0.85 0.41 0.21 0.15 0.58
-0.15 -1.14 -0.65 -0.73 -0.52 -0.36 1.02 -0.41 0.18 0.37 0.93 0.79 -0.22 -0.69 -0.99 0.15
-0.07 0.23 -1.06 -1.1 0.14 0.05 0.34 0.44 -3.87 -5.09 0.8 0.75 0.31 -0.02 0.25 0.3
0.4 -2.05 -1.39 -0.97 -0.7 -0.57 0.56 0.02 -2.52 -2.26 0.98 0.53 0.43 0.69 0.41 0.74
0.35 -0.04 -0.58 -0.47 -0.77 -0.76 0.76 -0.17 0.7 0.4 0.53 0.64 -0.71 -0.5 -0.65 -0.48
0.66 0.26 -0.11 0.34 -0.18 -0.02 0.43 -0.3 0.03 -0.01 0.4 -0.1 -0.51 -0.56 -0.91 -0.28
-1.81 0.94 -1.47 -0.71 -0.73 -0.29 0.42 -1.73 0.78 1.49 0.97 1.03 -1.6 -1.58 -1.99 -1.63
-0.59 -0.03 -1.57 -1.34 -1.72 -0.87 0.85 0.69 1.19 1.02 0.29 -0.04 -0.47 -0.48 -0.88 -0.18
0.33 0.33 0.07 0.2 -0.09 0.23 -0.38 -1.11 0.15 0.32 0.79 0.47 -0.77 -0.71 -0.93 -0.4
-0.9 1.18 -0.22 0.41 0.73 0.5 0.7 -0.67 -0.99 -1.7 -0.51 -0.57 -0.02 -0.12 -0.71 -0.01
1.61 -0.28 -2.22 -2.6 -1.56 -1.46 -0.24 0.04 0.43 -0.03 0.27 -0.45 0.56 0.03 -0.18 0.61
0.31 0.66 -1.16 -0.66 -0.63 -0.24 0.16 -1.01 0.24 0.79 0.48 0.68 -0.43 -0.25 -1.02 -0.0
0.04 -0.04 -0.21 0.07 -0.5 -0.53 0.62 -0.1 0.32 0.56 0.34 0.41 -0.47 -0.52 -0.69 -0.21
0.84 0.25 -1.87 -2.67 -0.28 -0.55 0.09 -0.18 -3.71 -4.46 -2.3 -1.75 0.97 1.15 1.02 1.2
0.2 0.32 -0.72 -0.57 -0.08 -0.06 0.82 0.06 0.1 0.31 0.66 0.67 -0.85 -1.2 -1.05 -0.62
0.51 -0.19 -1.46 -1.17 -0.45 -0.65 -0.25 -0.14 -0.09 -0.23 0.42 0.52 0.48 0.43 0.1 0.49
1.05 0.36 -0.32 -0.2 -0.38 -0.67 0.79 0.16 -0.1 -0.45 0.21 0.56 -0.68 -0.92 -0.69 -0.58
-0.82 -0.59 -2.36 -1.85 -2.45 -1.82 -0.67 0.73 1.55 2.24 -1.57 -1.31 -0.26 -0.38 -0.56 -0.19
0.27 0.26 -1.47 -1.16 -1.78 -1.08 -0.49 1.2 2.15 0.81 -0.57 -0.8 -1.25 -1.35 -1.65 -1.13
0.06 0.03 -3.24 -9.3 0.26 0.3 0.87 -0.37 -0.15 -0.59 0.56 0.41 0.27 -0.1 0.02 0.35
-0.61 -1.11 -1.17 -0.57 -1.35 -0.25 0.7 -0.91 -0.2 -0.78 -0.35 -0.7 0.99 0.93 0.52 1.14
-1.58 -1.5 -2.2 -3.1 -1.88 -2.35 -2.36 2.34 1.93 1.9 -3.04 -3.07 -1.66 -1.49 -1.51 -1.16
1.05 0.33 -1.46 -1.25 -0.9 -0.88 -1.34 0.61 0.98 1.23 -0.67 -0.42 -0.4 -0.33 -0.55 -0.09
0.38 -0.24 -0.89 -0.27 -0.47 -0.13 0.69 -0.26 0.55 0.46 0.67 0.3 -0.58 -0.54 -0.72 -0.36
1.0 0.97 -0.78 -1.26 -0.63 -0.63 -0.16 -0.74 -0.85 -0.71 -1.03 -0.41 0.56 0.44 0.33 0.83
0.68 -1.39 -1.0 -0.77 -0.26 0.06 0.15 -0.18 -4.13 -4.99 0.29 0.16 0.92 0.78 -0.17 1.1
0.58 0.37 -1.35 -2.66 -1.19 -1.15 -0.74 0.09 -4.1 -4.04 -3.87 -2.79 1.37 1.34 0.94 1.45
0.73 0.45 -1.42 -1.49 -0.93 -1.27 0.55 -0.18 -0.17 -0.37 -1.29 -0.92 0.74 0.68 0.52 0.73
-2.48 -1.8 -1.37 -0.62 -0.26 -0.73 0.46 1.67 1.13 0.96 -0.88 -0.48 -0.19 -0.5 -0.86 -0.05
0.38 -0.52 -0.75 -1.57 -0.87 -0.54 0.36 -0.7 -0.46 0.17 0.48 0.53 0.26 0.24 0.26 0.75
-0.19 0.55 -0.64 -0.38 -0.57 -0.64 0.13 0.09 0.9 0.48 -0.02 0.19 -0.17 -0.27 -0.44 -0.08
-0.37 0.13 -3.65 -2.94 -2.96 -2.37 -1.92 0.14 1.06 1.86 -0.05 -1.12 0.51 0.35 -0.57 0.78
-0.21 -0.97 0.28 0.29 0.62 0.66 0.33 -0.06 -0.0 -0.36 -0.12 0.24 -0.56 -0.36 -0.31 -0.48
1.2 -0.34 -2.14 -1.47 -1.11 -0.83 0.2 -0.24 1.04 0.87 0.42 0.48 -0.67 -0.59 -0.72 -0.36
0.12 0.4 -1.1 -0.93 -0.92 -0.3 -0.46 -0.85 0.31 0.85 1.42 0.95 -0.94 -0.64 -0.81 -0.76
-0.16 -0.35 0.07 0.43 0.28 0.71 -0.3 -0.92 -0.13 -0.58 0.68 0.74 -0.7 -0.34 -0.87 -0.08
-1.01 -1.55 1.66 1.8 1.16 1.08 -0.69 -1.13 -3.03 -2.66 0.08 0.0 -2.44 -2.58 -2.35 -2.12
0.91 -0.05 -0.55 -1.0 -0.27 -0.25 0.17 -0.74 -0.01 -0.17 0.49 0.75 -0.16 -0.18 -0.24 -0.01
0.91 0.32 -0.88 -0.84 -0.58 -0.59 0.38 0.07 0.53 0.41 0.4 0.35 -0.47 -0.73 -0.74 -0.33
1.1 -0.79 -1.51 -1.93 -1.49 -0.96 0.12 -0.94 -0.82 -0.61 0.1 -0.36 0.85 0.78 0.6 1.06
0.23 0.47 -2.5 -2.16 -2.12 -1.32 -0.15 0.26 -0.4 -0.38 -0.19 -0.82 0.91 0.84 0.39 1.24
0.28 -0.48 -0.02 -0.76 0.2 0.0 0.6 -0.29 0.09 0.09 0.69 0.38 -0.31 -0.46 -0.62 -0.35
- - -0.14 -0.05 - - 0.32 -0.18 1.37 1.63 0.73 0.96 -0.55 -2.24 0.28 -0.68
-0.84 -1.58 0.35 0.96 1.1 1.04 1.3 0.09 -0.86 -0.34 -0.05 -0.27 -1.85 -2.11 -2.01 -1.91
0.6 0.39 -0.53 -0.38 -0.35 -0.54 0.29 -0.43 -0.91 -1.35 -0.8 -0.84 0.56 0.54 0.63 0.8
0.99 -0.03 -1.56 -2.12 -1.15 -0.73 -0.27 -1.07 -8.99 -8.93 -3.85 -2.62 1.29 1.26 1.24 1.41
0.29 0.7 -0.97 -0.79 -0.75 -0.47 -0.04 -0.6 0.59 0.32 0.37 0.62 -0.37 -0.12 -0.65 0.26
-0.12 1.79 -0.32 -0.5 -0.58 0.92 -0.02 0.25 -0.29 -0.97 0.14 0.4 -1.22 -1.47 -1.68 -0.91
-1.54 -2.06 1.36 1.65 1.35 1.31 -0.35 -2.09 -1.7 -1.13 0.46 0.06 -3.15 -3.09 -3.17 -2.77
-3.64 -1.52 -1.7 -0.79 -0.9 -0.07 0.96 -0.49 1.57 1.05 1.24 0.5 -1.17 -1.24 -1.5 -1.01
0.67 -0.42 -0.55 -0.76 -0.16 -0.17 0.56 -0.42 0.1 -0.34 0.31 0.4 -0.01 -0.05 0.13 -0.12
0.94 0.68 -2.25 -2.8 -1.81 -1.71 -0.63 0.38 -0.6 -2.58 -0.37 -0.71 0.96 0.95 0.52 1.04
1.12 -0.59 -0.07 -0.45 -0.05 0.21 -0.02 -0.9 -0.99 -0.61 -0.61 -0.7 0.4 0.41 0.44 0.47
-0.28 -2.87 -1.32 -1.61 -0.97 -0.96 0.62 -0.54 -1.26 -1.11 0.46 -0.22 1.09 0.95 0.87 1.04
-0.1 -0.88 -0.92 -0.86 -1.31 -1.26 0.83 0.13 0.51 0.16 0.53 0.71 0.19 -0.14 -0.16 0.26
0.47 0.31 -1.4 -2.48 -0.69 -0.77 0.7 0.61 -0.0 -0.31 0.57 -0.08 0.06 0.02 -0.06 0.28
1.04 -0.32 -1.52 -1.45 -0.98 -0.48 0.41 0.02 -0.7 -1.05 0.31 -0.34 0.81 0.34 -0.29 0.92
-0.81 -0.9 -1.99 -3.2 -2.27 -1.46 -1.77 -1.17 1.68 2.07 -0.58 -0.07 -0.04 -0.01 -0.59 0.65
1.97 -0.3 -0.74 -1.5 -0.52 -0.74 0.31 -0.45 -3.0 -3.95 -1.29 -0.19 0.55 0.45 0.22 0.66
0.29 0.5 -0.6 -0.45 -0.55 -0.31 0.72 -0.24 0.35 -0.05 0.88 0.83 -0.88 -0.95 -1.08 -0.78
0.13 0.04 -0.79 -0.75 0.1 0.4 0.37 -1.16 -1.23 -2.52 1.01 1.22 -0.03 -0.06 -0.46 -0.07
0.5 0.48 0.02 -0.91 0.14 -0.09 0.78 -0.86 -3.4 -2.58 -1.1 -0.5 0.61 0.57 0.49 0.55
0.22 -0.37 0.09 0.64 0.44 1.56 -0.15 -0.81 -0.92 -0.97 0.23 -0.07 -0.73 -0.75 -0.69 -0.55
0.5 -0.53 -0.94 -0.32 -1.5 -0.38 0.35 -0.03 0.84 0.79 0.28 -0.73 -0.17 -0.2 -0.28 0.35
-0.13 0.96 -0.81 -0.74 0.05 0.05 0.36 -0.16 0.96 0.35 0.28 0.09 -0.82 -0.78 -1.18 -0.64
-2.17 -0.07 1.99 1.35 -0.16 -0.17 -3.04 -1.09 -3.62 -5.18 -0.63 -0.96 -0.04 -0.47 0.7 0.41
0.29 1.52 -0.1 -1.22 -0.13 -0.5 -0.73 -1.26 -1.9 -2.28 -1.33 -1.28 0.32 0.74 1.03 0.74
0.19 2.28 -1.91 -1.42 -1.04 -1.17 0.55 -1.03 -0.47 0.06 -0.06 -0.38 -0.53 -0.5 -0.64 -0.05
-0.12 -0.74 -1.61 -2.13 -1.34 -0.86 0.17 0.38 0.75 0.83 -0.09 -0.13 0.24 0.3 0.3 0.67
-0.74 -1.35 -0.06 -0.18 -2.0 -1.75 0.29 0.12 0.66 1.2 1.09 0.84 -0.5 -0.73 -0.86 -0.62
1.0 0.29 0.34 0.4 0.26 0.48 0.01 -0.58 -0.52 -1.32 -0.73 -0.29 -0.23 -0.38 -0.19 -0.11
0.67 -1.18 -0.59 -1.47 -0.54 -0.54 -0.07 0.68 -6.59 -5.27 -1.38 -0.1 1.05 1.03 0.4 1.17
0.65 0.56 -0.51 -0.35 -0.47 -0.37 0.27 -0.27 -0.16 -0.58 0.26 0.12 0.01 0.17 -0.13 0.08
0.5 0.09 -0.12 -0.21 0.0 -0.06 0.84 -0.07 0.06 0.02 0.19 -0.03 -0.17 -0.39 -1.19 -0.39
0.06 0.05 -0.4 -0.21 0.01 -0.52 0.61 -0.3 -0.28 -0.33 0.14 -0.2 0.41 0.05 -0.19 0.51
-0.28 0.04 0.92 0.95 0.75 0.71 0.1 -0.45 -1.88 -1.69 -0.24 -0.09 -0.26 -0.61 -0.8 -0.36
1.94 -1.54 -2.66 -2.6 -1.35 -1.72 -0.39 -0.94 -5.03 -3.97 -0.79 -1.62 1.36 1.08 0.88 1.0
-0.37 -0.47 -1.53 -1.3 -1.09 -1.03 0.91 0.15 0.59 0.28 0.96 0.87 -0.38 -0.31 -0.47 0.01
0.41 -0.36 -0.4 -0.14 -0.31 -0.14 0.46 -0.51 -0.13 -0.24 0.75 0.51 -0.14 -0.13 -0.43 -0.0

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.