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Heatmap: Cluster_33 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view zlog-transformed or row-normalized)

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(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
20.08 9.92 4.6 5.52 4.23 4.05 27.06 118.41 227.84 196.93 6.71 2.61 10.34 5.06 3.49 9.34
0.22 0.85 2.29 0.92 4.5 3.46 0.81 0.3 0.0 0.0 0.18 0.0 87.57 92.14 48.59 113.84
29.62 10.73 116.69 115.12 182.99 99.49 222.94 114.85 219.15 432.86 262.01 210.58 41.74 34.3 18.88 30.51
2.28 0.49 4.95 7.03 7.2 11.78 3.9 2.38 0.26 1.46 3.57 2.28 28.26 31.12 16.71 29.78
53.34 664.45 93.29 108.71 94.65 143.59 35.19 42.16 16.34 12.22 6.34 6.34 29.6 27.44 79.77 14.35
0.19 8.19 0.37 0.0 0.9 1.64 0.09 2.67 0.89 0.12 0.0 0.33 0.84 0.2 0.28 0.9
0.08 0.27 4.16 4.05 6.68 5.55 1.31 0.67 1.28 0.14 1.15 1.44 0.34 0.44 0.5 1.02
13.37 3.99 3.8 2.06 0.34 0.58 0.77 12.35 93.68 108.32 9.48 4.64 2.82 2.22 0.52 2.77
1.26 0.06 5.56 12.98 9.37 4.51 56.16 88.87 83.51 70.45 40.73 29.23 7.41 1.04 0.73 5.78
1.93 10.23 0.44 2.55 2.55 9.63 4.61 40.55 23.69 7.35 3.34 1.52 1.33 0.51 0.0 0.43
0.38 0.13 189.61 122.45 106.08 126.13 9.68 3.64 3.64 1.06 47.1 13.15 2.88 0.39 0.2 1.7
15.57 122.64 0.57 0.55 0.62 0.83 0.08 0.34 0.45 0.47 0.16 0.1 1.39 0.89 0.99 2.08
0.01 1.15 23.6 28.99 7.5 16.38 0.4 0.32 0.19 0.24 1.34 1.84 2.51 0.9 0.38 3.19
1.38 59.28 0.04 0.0 0.0 0.0 0.19 7.49 0.19 0.66 0.0 0.06 11.49 4.33 1.57 13.19
2.22 0.29 2.84 2.67 8.26 7.34 1.31 2.23 0.0 0.0 0.41 0.38 45.51 45.38 67.76 54.01
29.16 26.57 14.69 14.05 20.15 29.57 114.54 65.08 106.72 146.01 57.13 42.66 20.38 14.35 6.88 23.24
0.34 0.24 74.48 60.37 98.25 35.04 0.68 1.0 0.15 0.06 1.3 2.33 0.0 0.07 0.0 0.56
0.12 2.27 4.55 3.66 5.3 6.35 9.52 1.19 0.31 0.42 5.65 4.37 9.48 6.12 3.33 12.74
3.05 12.97 10.64 12.85 23.7 9.7 46.87 7.29 39.58 44.6 4.42 6.48 4.49 1.71 0.24 3.57
0.26 0.36 349.98 452.24 752.6 185.98 54.17 2.39 0.5 0.13 27.49 76.6 3.28 1.54 2.46 7.75
2.8 0.23 0.4 0.82 0.12 0.03 1.56 0.74 7.66 5.07 1.07 0.33 2.23 0.55 0.21 0.29
5.8 7.44 3.87 1.78 4.02 3.62 7.81 103.95 84.7 71.75 5.17 3.89 11.89 8.78 3.69 12.2
0.63 0.97 3.05 3.73 8.58 8.35 4.23 3.93 0.0 0.0 0.08 1.01 7.83 5.54 3.58 5.85
0.05 0.3 0.0 0.0 0.05 0.04 0.0 0.0 0.0 0.0 0.0 0.0 6.46 4.96 0.98 9.73
88.65 0.04 0.33 0.0 0.06 0.22 0.07 0.03 0.0 0.0 0.0 0.0 11.46 10.33 0.41 22.18
0.03 0.0 0.05 0.0 0.0 0.0 0.17 1.03 0.14 0.14 0.07 0.0 16.75 5.72 0.0 6.41
0.59 0.0 4.63 5.83 1.52 4.52 2.11 1.88 1.28 0.9 1.91 1.17 23.9 22.97 3.56 25.85
0.19 0.0 3.44 2.68 6.2 1.8 7.02 0.51 0.0 0.09 0.74 2.74 8.41 2.12 1.69 6.13
7.02 0.0 0.0 0.1 0.0 0.0 0.1 1.79 2.48 4.05 0.13 0.12 3.62 0.14 0.3 4.01
1.19 51.04 0.82 0.0 1.13 0.11 3.92 22.97 0.08 0.17 0.17 0.24 3.88 0.0 0.0 6.19
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.03 0.0 0.0
8.14 10.82 18.83 29.45 22.18 21.77 71.37 312.92 120.19 65.89 23.67 15.07 36.84 15.57 5.35 8.07
23.55 19.06 26.3 28.78 38.03 31.27 18.11 19.56 0.2 0.14 10.46 14.1 18.05 4.48 2.4 28.28
0.01 0.01 35.95 26.06 33.31 29.22 23.52 8.89 6.41 4.28 63.45 65.72 2.8 0.78 0.54 1.81
0.0 0.0 0.66 0.16 0.09 0.39 0.72 0.09 0.0 0.0 0.0 0.06 8.95 0.07 0.3 22.23
14.89 0.0 0.48 0.37 0.73 0.57 1.45 7.07 0.0 0.0 0.16 0.15 7.22 4.56 1.42 10.61
0.27 22.01 4.2 2.18 4.83 2.13 1.38 1.12 5.85 3.99 2.02 2.49 0.48 0.29 0.14 0.95
2.67 31.49 3.33 6.01 7.71 7.0 4.11 11.43 21.67 22.07 4.74 3.79 13.51 12.54 10.93 7.84
0.68 5.15 7.55 4.08 3.36 5.31 2.52 3.89 0.11 0.45 0.52 1.05 15.96 14.68 11.54 20.42
0.0 0.0 0.13 0.16 0.21 0.31 0.68 0.01 0.11 0.03 1.8 2.08 2.4 0.82 1.11 3.24
0.3 0.34 0.65 0.83 0.69 0.88 1.16 4.1 3.1 3.02 2.04 0.41 1.85 2.11 1.57 2.57
2.11 1.24 0.0 0.0 0.14 0.43 0.63 3.25 2.43 3.17 0.15 0.0 6.77 5.0 2.35 5.52
11.47 12.17 2.85 4.8 6.11 5.34 19.2 16.2 5.51 5.7 12.12 3.01 39.53 35.14 19.42 47.16
8.77 28.85 46.04 58.4 25.47 36.88 37.81 48.35 88.5 81.28 155.97 98.71 28.34 10.47 7.21 17.36
2.76 4.57 24.68 30.16 31.93 20.27 44.91 92.47 38.69 27.37 31.22 32.42 14.75 9.94 9.75 13.89
8.94 36.34 315.98 308.49 176.99 137.71 103.94 1889.66 1487.25 658.5 20.54 17.58 18.01 7.24 4.42 15.74
64.94 36.14 57.27 55.25 55.63 58.57 92.55 42.28 43.3 39.11 78.25 80.17 119.71 146.1 109.4 140.9
1.68 0.04 62.96 53.24 87.52 86.55 9.67 3.81 0.0 0.0 1.71 1.76 45.48 48.98 49.34 43.71
10.09 7.75 14.72 16.19 22.78 48.08 9.1 2.86 18.37 24.6 37.85 19.55 1.85 1.19 0.69 2.91
5.29 2.61 2.69 3.72 4.99 2.92 2.68 1.95 3.35 2.7 3.33 3.26 6.0 5.02 3.49 6.98
3.82 2.06 13.15 7.85 15.22 4.3 13.97 10.96 4.68 2.29 5.06 5.36 4.01 1.62 0.85 2.32
2.28 10.9 0.77 2.61 1.19 0.7 9.74 51.56 187.97 364.32 6.02 4.15 4.59 4.86 3.33 9.76
37.09 43.38 93.94 100.73 96.27 55.82 42.82 61.77 89.48 72.93 55.16 43.54 46.16 23.62 18.15 26.66
0.66 0.19 0.0 0.0 0.0 0.0 0.12 0.2 0.0 0.0 0.0 0.0 1.99 0.26 0.0 4.0
28.14 23.27 1.37 2.92 5.55 7.66 1.74 1.65 9.96 8.44 16.0 7.44 11.65 7.94 0.89 24.29
2.17 0.81 7.0 3.65 3.73 4.07 5.95 15.58 50.05 42.23 2.34 1.99 7.8 6.08 2.56 2.98
13.0 29.95 12.96 24.73 19.25 32.35 42.78 11.9 9.77 19.1 23.52 16.02 5.19 3.47 2.74 4.52
82.03 115.66 321.09 249.68 185.11 176.84 109.75 88.53 79.04 121.95 221.49 371.96 42.77 36.83 34.3 96.28
5.9 3.68 1.9 2.9 5.78 3.81 7.61 1.66 0.0 0.0 1.01 12.87 6.79 1.18 0.25 8.19
0.74 0.42 1.21 1.02 1.15 1.58 0.15 0.33 17.87 11.55 6.89 5.62 0.07 0.18 0.15 0.0
1.04 1.24 1.17 1.33 3.19 3.64 1.22 1.34 0.58 0.21 2.46 0.57 4.84 3.92 2.72 6.67
2.77 1.42 0.68 1.27 1.22 0.28 0.11 0.19 1.5 0.56 0.06 0.11 0.27 0.0 0.0 0.0
0.19 0.0 0.2 0.26 0.52 1.07 0.6 0.22 0.0 0.0 0.11 0.41 0.51 0.24 0.0 1.87
78.17 29.17 120.79 143.34 79.09 143.67 17.94 12.76 41.67 29.55 40.95 40.8 7.64 7.8 6.73 8.46
0.69 0.2 4.54 14.62 156.96 46.71 5.92 9.76 1.18 0.03 23.69 9.3 17.14 4.05 9.97 12.25
7.28 22.28 5.66 10.15 9.36 5.31 17.4 15.69 23.24 2.56 43.0 47.63 27.09 19.01 23.57 59.06
7.76 5.53 1.96 1.15 2.14 6.56 6.72 2.05 2.25 5.12 7.72 4.13 12.18 10.19 7.75 9.6
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.12 0.0 0.48
19.18 26.69 1.04 0.85 1.53 1.12 0.13 2.37 1.17 1.87 0.33 0.23 228.73 127.69 132.95 288.19
5.65 4.19 0.13 1.29 1.12 0.94 16.17 16.21 14.25 13.02 13.26 10.5 17.46 7.95 7.99 27.67
0.1 0.1 1.28 0.8 0.66 0.19 18.26 0.09 0.0 0.0 0.18 0.31 7.37 0.81 0.48 11.74
9.92 6.69 3.54 3.09 2.38 1.64 27.73 5.37 15.04 10.5 6.11 19.43 13.5 3.84 2.84 12.61
0.38 3.45 6.38 4.33 7.52 5.61 5.71 3.39 3.86 17.8 4.1 3.01 0.39 0.5 0.11 0.51
0.07 0.0 4.07 6.21 4.93 7.31 0.31 3.31 0.23 0.0 11.81 6.31 2.17 1.08 0.78 2.59
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1.37 7.48 5.36 2.94 2.48 2.39 1.49 9.59 127.18 29.39 0.52 0.65 38.37 20.25 9.19 31.12
7.07 6.76 9.36 13.98 16.62 6.46 13.17 9.18 9.47 11.6 10.94 12.33 9.0 7.5 7.18 11.18
2.46 0.16 1.81 1.57 4.44 7.51 2.98 8.19 0.4 0.21 1.59 3.38 15.25 15.89 9.44 19.73
1.35 0.03 0.0 0.0 0.0 0.15 0.09 1.3 0.0 0.0 0.0 0.0 4.69 4.12 4.05 9.81
4.03 28.56 8.54 6.21 6.48 32.85 45.77 15.52 5.87 15.83 18.51 19.73 1.91 0.17 0.0 0.98
0.55 0.0 14.07 39.81 10.78 107.88 50.55 87.09 60.56 57.48 90.86 46.66 0.49 0.12 0.0 0.45
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
16.17 15.15 9.83 12.24 11.33 11.99 16.58 22.24 47.52 27.4 21.21 17.74 3.98 4.9 2.32 6.36
0.38 0.0 0.0 0.03 0.09 0.05 0.02 0.27 0.0 0.0 0.0 0.0 12.53 9.69 12.22 32.61
61.74 70.92 38.78 46.75 60.4 65.92 175.87 55.57 98.52 79.89 124.32 96.58 73.86 68.03 53.65 77.1
7.06 163.44 8.5 7.29 10.91 10.08 7.68 7.09 1.4 2.64 0.81 1.76 3.12 7.29 0.61 2.86
0.65 2.09 16.61 13.34 11.02 32.01 3.22 1.18 1.24 0.08 2.71 1.94 2.88 1.22 0.49 3.59
0.0 0.05 0.7 0.0 0.38 2.4 0.49 1.46 0.4 0.0 0.14 0.53 0.98 0.0 0.0 2.39
1.75 0.44 0.0 0.02 0.06 0.08 0.0 2.01 0.38 0.0 0.12 0.2 3.86 1.7 0.15 2.04
0.19 3.42 0.0 0.0 0.0 0.6 0.0 0.29 0.0 0.0 0.0 0.0 30.38 14.21 41.34 30.03
53.3 43.09 70.54 63.91 77.96 122.08 123.7 215.53 133.56 128.3 165.12 151.6 85.03 77.97 89.52 69.43
24.17 26.13 5.55 7.76 8.26 3.79 16.03 40.57 145.11 101.23 17.68 16.14 21.64 10.27 5.13 8.73
1.12 0.0 2.74 0.89 1.34 0.83 0.05 1.39 0.0 0.0 0.12 0.6 0.42 0.26 0.0 1.66
4.07 28.31 15.15 12.56 7.91 12.53 7.99 2.09 0.03 0.0 11.79 12.31 10.66 6.03 6.5 12.89
0.0 0.26 11.26 6.46 1.5 2.18 0.62 0.22 0.0 0.39 0.13 0.74 10.77 8.49 3.02 10.73
7.56 2.55 7.1 7.95 10.22 13.47 4.7 1.01 18.71 17.08 17.23 6.79 4.75 2.33 0.34 6.18
3.17 3.09 23.32 32.94 23.81 15.0 8.58 8.3 1.68 1.97 12.67 5.94 9.11 7.3 4.6 11.46
0.12 0.17 3.37 1.52 19.84 51.59 43.17 2.72 2.16 2.29 52.36 41.7 6.16 1.91 2.98 6.78
32.97 116.12 39.13 32.59 41.27 31.58 15.76 26.81 106.61 31.62 52.84 88.1 32.31 26.41 18.56 84.8
0.03 37.32 5.12 14.18 43.91 335.06 0.32 1.95 6.9 2.59 1.18 3.63 0.87 1.13 1.36 1.27
367.18 11.98 2.13 5.66 7.62 3.44 5.41 89.6 0.0 0.0 1.13 28.13 272.04 133.53 186.36 162.81

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)