Heatmap: Cluster_605 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
1.94 0.13 -5.11 -3.04 -2.76 -2.29 -4.37 -2.38 -3.53 -2.15 -2.56 -1.43 0.97 0.99 0.94 1.85
0.4 0.32 -2.32 -2.51 -1.57 -1.56 0.51 0.17 0.88 0.57 0.19 -0.05 0.27 0.05 -0.22 0.39
-0.27 -1.46 -4.48 -2.91 -3.24 -3.07 -2.14 1.96 1.71 1.86 -2.48 -2.29 -0.52 -0.79 -0.45 -0.04
0.99 0.02 -3.12 -2.92 -2.48 -2.71 0.77 0.57 0.05 0.27 0.33 -0.7 0.21 -0.29 0.26 0.97

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.