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Heatmap: Cluster_209 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.37 -0.32 -2.06 -1.87 -2.02 -1.72 -0.27 0.47 0.97 2.03 -1.05 -1.59 0.21 -0.02 -0.98 0.72
-0.33 -0.41 -0.85 -0.58 -0.48 -0.08 0.12 -0.36 0.66 0.42 0.9 0.21 0.17 -0.27 -0.54 0.17
-0.13 -3.34 -0.81 -1.01 0.0 -0.05 0.34 0.28 -7.06 -6.06 0.74 1.38 0.46 0.3 0.1 0.59
-1.16 -0.25 0.57 1.14 0.69 1.16 0.3 -0.6 -2.59 -1.32 -0.57 -0.76 0.3 -0.38 -1.93 0.25
0.45 0.13 -1.12 -1.18 -0.93 -0.52 -0.58 -1.48 -5.63 -5.26 -1.32 0.14 1.5 1.08 0.38 1.38
0.9 -1.05 -2.34 -1.78 -2.33 -1.64 0.39 -0.0 0.1 0.63 -0.05 -2.0 0.71 0.59 0.31 1.08
0.01 -7.67 -1.2 -2.63 -1.46 -1.47 -1.72 -0.61 - - -4.52 -3.17 1.9 1.44 1.36 1.83
0.89 0.08 -0.3 -1.26 0.32 0.25 0.53 -0.46 0.26 1.14 -0.58 -0.52 -0.46 -0.98 -0.92 -0.45
0.64 0.13 -0.94 -0.36 -0.62 -0.34 0.21 -0.07 0.54 0.04 0.35 0.3 -0.05 -0.21 -0.57 0.01
0.36 -1.34 -1.64 -1.29 -1.21 -1.65 0.03 -0.01 0.3 1.01 -0.26 -0.23 0.69 0.57 0.16 0.73
0.03 -0.39 -0.14 0.11 0.19 -0.09 0.1 -0.01 0.74 -0.21 0.29 -0.34 0.05 -0.28 -0.63 0.04
0.62 -1.25 -1.33 -1.61 -1.11 -0.47 -0.2 -1.17 0.18 0.66 1.01 0.2 0.57 0.27 -0.08 0.39
0.13 -1.19 -0.56 -0.61 0.2 0.08 0.3 -0.33 -0.19 -0.38 0.38 0.13 0.7 -0.07 -0.09 0.43
0.53 -0.12 -1.21 -0.8 -0.52 -0.65 0.46 0.32 0.6 0.37 0.15 0.14 0.01 -0.28 -0.43 0.1
-0.8 -0.81 -1.38 -1.86 -1.47 -1.48 -1.03 -0.68 -1.3 -1.0 -0.93 -1.41 1.59 1.25 0.72 1.82
0.4 0.39 -1.43 -0.68 -1.1 -0.43 -0.13 -1.01 -0.01 0.94 0.82 0.5 0.09 -0.28 -0.49 0.09
-2.57 -2.16 -2.27 -0.62 -1.65 -3.05 -1.62 0.28 3.05 1.75 -1.6 -1.64 -2.93 -3.25 -3.59 -2.65
0.26 -0.29 -0.88 -0.78 -1.26 -0.71 0.37 0.15 -0.19 -0.21 0.96 0.59 0.41 0.15 -0.39 0.06
-0.23 -1.26 -2.83 -3.43 -2.01 -0.92 -0.31 0.14 -1.46 -0.34 0.68 0.61 1.14 0.88 0.4 1.12
1.97 0.03 0.06 -0.08 0.31 0.46 0.82 0.2 -1.45 -1.16 -1.96 -0.69 -0.71 -1.42 -1.86 -0.78
0.84 -1.53 0.42 0.13 0.53 1.46 -0.58 -1.56 -3.05 -4.31 -0.03 -1.36 0.89 -0.47 -0.54 0.52
-0.74 -0.32 0.1 -0.66 0.09 0.36 0.9 0.9 -0.38 -1.6 0.04 0.08 0.14 -0.11 -0.9 0.08
0.21 -0.77 0.48 0.65 0.52 1.01 0.39 -0.93 -0.61 -0.75 0.69 0.31 -0.49 -1.39 -1.62 -1.0
0.14 -1.76 -1.49 -1.84 -0.88 -0.39 -0.42 0.62 0.28 0.57 -0.05 -0.36 0.85 0.57 -0.04 0.74
-0.85 -1.7 -6.49 - - - - - - - - - 1.93 1.9 1.57 2.2
0.83 -0.35 -0.75 -0.91 -0.52 -0.84 0.34 -0.29 -1.67 -1.65 0.1 -0.09 0.84 0.56 0.16 0.96
0.59 -0.19 -1.02 -0.95 -0.84 -0.62 0.14 -0.76 0.09 0.47 1.59 0.88 -0.43 -1.05 -1.03 -0.53
1.31 1.56 -4.44 -3.43 -3.31 -2.19 -2.86 0.07 1.27 1.65 -0.84 -2.13 -0.19 -0.58 -3.14 -0.1
-0.05 -0.07 -0.75 -0.52 -0.84 -0.79 0.58 0.61 1.1 1.06 0.2 -0.19 -0.78 -0.93 -1.01 -0.37
0.26 1.49 -2.52 -2.8 -2.12 -2.3 -1.47 -1.49 0.77 -0.05 -1.91 -2.25 1.39 0.37 -1.53 1.64
0.21 -0.26 -0.49 -0.17 -0.57 -0.15 -0.32 -0.5 0.39 0.4 0.13 0.16 0.27 -0.0 -0.07 0.4
-0.29 -0.31 -1.3 -0.68 -1.28 -0.92 0.43 0.04 0.85 0.83 0.72 0.37 -0.25 -0.41 -0.45 0.24
1.15 1.08 -1.77 -1.65 -2.18 -1.78 0.37 -0.11 0.16 0.05 -0.96 -0.95 0.79 0.16 -0.59 0.71
0.62 -1.47 0.35 0.59 -0.3 1.44 0.03 -0.4 -6.94 - -1.02 -1.19 0.57 0.17 -0.07 0.6
0.86 -0.19 -0.45 0.02 0.08 0.15 0.06 -0.11 -0.32 -0.48 0.23 -0.04 0.08 -0.17 -0.37 0.06
-0.02 -0.31 -0.13 0.27 0.35 0.63 0.21 -0.6 -0.53 -0.8 0.3 0.2 0.0 -0.06 -0.29 0.02
0.68 -0.6 0.58 0.97 0.44 0.43 0.27 -0.31 -0.46 -0.71 0.32 -0.24 -0.81 -0.92 -1.35 -0.64
-0.21 -0.5 1.35 0.76 1.09 1.14 -0.36 -0.18 -0.65 -1.99 -1.56 -1.4 -0.16 -0.6 -2.47 -0.27
-1.15 0.25 -2.73 -3.15 -2.13 -2.72 1.07 0.35 1.47 0.92 1.07 0.93 -1.06 -1.42 -2.1 -0.75
-0.48 -1.18 -0.19 -0.02 -0.35 -0.18 -0.4 -0.87 -0.47 -0.17 -0.07 -0.92 0.86 0.71 0.56 1.0
-4.08 -1.33 -5.84 -5.36 -4.22 -3.84 -3.52 2.12 2.37 2.43 -3.83 -3.81 -3.61 -4.21 -4.57 -3.17
2.34 0.36 -2.36 -1.94 -1.27 -1.1 -0.51 -0.95 -2.17 -2.79 -1.01 -0.91 0.63 0.04 -0.24 1.18
-0.93 -2.03 1.24 1.45 1.0 1.38 -0.2 -2.25 -1.16 -1.03 0.85 0.5 -3.71 -4.04 -4.73 -3.08
0.77 0.85 -0.22 -0.26 -0.21 -0.9 -0.49 -0.95 -0.93 -1.49 0.68 0.01 0.5 0.2 -1.16 0.74
1.52 0.29 -6.62 -6.65 -5.07 -6.65 -2.2 -2.9 -1.31 -0.54 -3.14 -5.64 1.31 1.36 0.91 1.75
-1.73 2.92 -3.19 -3.66 -2.24 -2.36 -2.75 -0.13 0.44 1.29 -1.55 -1.75 -0.67 -1.1 -1.41 -0.84
-1.08 -3.26 -0.47 -0.41 -1.19 -0.67 0.63 -0.27 0.19 0.88 0.83 0.37 0.32 0.25 -0.5 0.39
1.53 -0.05 -0.02 0.08 -0.72 -0.17 0.16 -0.88 0.32 0.44 0.44 -0.33 -0.59 -0.87 -1.31 -0.77
0.37 -0.11 1.27 1.4 -0.0 -1.24 -0.85 -0.9 0.16 -0.1 -1.35 -0.84 0.02 -0.57 -0.68 -0.13
1.95 1.01 -2.22 -1.83 -1.58 -1.02 -2.03 1.76 -0.87 -0.91 -2.44 -1.63 0.19 -0.24 -0.58 -0.13
0.92 -0.55 -0.3 -0.86 0.24 -0.16 -0.01 0.5 -0.26 0.15 -0.5 0.12 0.08 0.03 -0.33 -0.04
-2.6 -4.06 -2.26 -3.44 -0.82 -0.9 -2.56 -0.01 - - -5.69 -3.8 2.15 1.29 0.35 2.31
-1.2 0.29 1.44 1.54 0.71 -0.55 -1.03 -0.68 -1.18 -1.0 -1.2 -1.1 -0.14 -0.35 -0.32 -0.05
0.82 -1.02 -0.66 -0.92 -0.1 0.07 -0.14 -0.92 -5.54 -5.2 -1.63 -0.45 1.07 0.92 0.62 1.34
0.21 -1.26 -1.49 -2.57 -1.43 -1.17 -1.13 -0.71 -8.33 -8.27 -3.78 -2.64 1.8 1.51 1.26 1.6
-2.77 -5.45 -2.88 -4.13 -3.42 -2.14 -2.29 -1.26 - -7.13 - -5.61 2.17 2.02 1.28 1.88
-0.61 -0.48 -0.33 -0.01 -0.01 0.09 0.08 -0.43 0.28 0.34 0.68 0.64 -0.23 -0.18 -0.79 0.04
-0.43 -0.44 0.01 0.68 0.23 0.29 0.54 0.26 0.69 0.37 -0.2 -0.77 -0.4 -0.77 -1.54 -0.3
-2.52 -4.1 -0.36 0.06 0.19 0.04 0.97 1.88 0.92 0.22 -0.92 -0.23 -0.86 -1.31 -1.79 -1.14
0.79 0.23 -4.23 -3.99 -3.03 -2.64 -0.44 0.3 -4.06 -3.1 -0.79 -0.3 1.5 1.34 0.26 1.38
0.36 -0.42 0.05 0.37 -0.1 0.23 0.15 -0.42 0.07 0.33 0.33 -0.76 -0.01 -0.29 -0.72 0.15
-1.23 -2.93 -0.6 -0.67 -0.21 -0.19 0.36 2.04 -1.46 -1.44 -0.03 0.26 0.27 -0.21 -0.22 0.23
1.07 -4.62 -1.14 -2.27 -1.4 -1.4 -2.19 -1.57 -12.44 -10.06 -6.02 -4.21 1.7 1.28 1.25 1.91
-0.1 -0.46 -0.92 -0.74 -0.53 -0.5 0.3 0.16 0.16 0.17 0.24 0.16 0.4 0.28 0.06 0.42
0.42 -4.0 -1.04 -2.03 -1.01 -1.35 -1.1 -0.45 -7.4 -7.93 -3.81 -2.59 1.71 1.48 1.13 1.72
0.02 -0.55 -0.76 -0.22 -1.37 -1.23 0.63 0.01 0.31 0.32 0.14 -1.27 0.67 0.31 -0.08 0.77
1.4 -4.14 -0.05 -1.12 -0.31 -0.11 -1.43 -1.44 -10.02 -8.06 -4.63 -3.29 1.31 1.06 0.98 1.44
-1.09 -0.65 -0.71 -0.32 -0.58 -0.41 0.43 -0.4 -0.38 -0.13 0.26 0.26 0.65 0.43 0.13 0.9
-1.3 -3.68 -3.23 -4.78 -3.46 -2.41 -1.83 -0.98 -7.55 - -4.99 -3.0 2.13 2.09 0.67 1.97
0.07 -0.9 -1.64 -1.69 -0.91 -0.83 0.04 0.16 0.62 0.43 1.16 1.3 -0.3 -0.44 -0.84 -0.25
-0.89 -0.85 -2.99 -2.56 -3.56 -2.33 0.25 1.56 1.79 1.98 -0.43 -0.78 -1.51 -1.7 -2.05 -0.81
0.39 0.38 -0.64 -0.67 0.12 -0.23 0.26 -0.14 0.26 -0.56 0.38 0.58 -0.02 -0.04 -0.91 -0.12
1.69 -4.12 -4.18 -4.27 -3.39 -7.81 -2.77 -1.75 - - -3.65 -5.63 1.93 1.29 0.41 2.13
-0.07 -0.49 -1.56 -1.03 -1.35 -0.6 0.52 -0.35 0.64 0.82 0.45 -0.46 0.53 0.02 -0.21 0.57
0.22 0.66 -0.31 -0.22 -0.21 0.07 -0.53 -0.69 1.27 0.53 -0.08 -0.13 -0.31 -0.53 -1.52 -0.32
0.19 -2.28 -1.91 -2.44 -1.73 -1.75 -1.39 -0.31 -4.69 -5.48 -3.52 -3.26 1.73 1.58 1.44 1.65
-0.86 -3.41 -1.89 -1.85 -2.05 -0.93 -1.06 0.89 -6.23 -5.79 -3.23 -2.4 1.69 1.51 0.91 1.77
-1.0 -0.95 0.95 1.44 0.91 0.84 -0.18 -1.44 -0.1 -0.69 0.33 -0.26 -1.19 -1.27 -1.5 -0.8
-1.0 -1.23 -5.9 -5.23 -4.19 -3.65 -3.9 2.12 2.18 2.02 -4.89 -4.72 -0.76 -1.0 -3.22 -0.67
1.27 -2.41 -6.04 -5.36 -7.05 -4.63 -2.57 -0.13 -4.41 -4.23 -3.19 -3.39 1.94 1.71 0.46 1.78
-0.06 -0.45 -0.96 -1.05 -0.4 -0.21 0.56 0.07 0.15 0.09 0.52 0.08 0.62 0.0 -0.19 0.14
0.94 -0.74 -2.3 -2.35 -1.86 -0.94 -0.04 -0.67 -1.38 -0.46 -0.56 -0.91 1.23 0.96 0.3 1.51
-0.1 -0.7 -0.31 -0.19 -0.43 -0.55 0.81 0.1 -0.54 -0.43 0.44 0.5 0.15 0.07 -0.07 0.27
1.22 0.84 -1.65 -1.19 -0.9 -1.18 0.57 -0.43 -1.71 -1.94 -0.53 -0.64 0.75 0.39 0.23 0.9
-0.3 0.38 -0.99 -0.11 -0.28 -0.07 0.31 -0.2 0.94 0.47 0.72 0.57 -0.65 -1.2 -2.73 -0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.