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Heatmap: Cluster_120 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.17 0.78 -2.49 -1.83 -0.94 0.0 0.89 0.12 -0.41 0.18 0.73 0.63 -0.07 -0.46 -1.8 0.24
0.15 -1.61 -2.11 -1.46 -1.53 -2.0 -0.34 0.12 0.43 -0.29 0.2 -0.79 1.27 0.8 0.22 1.18
0.34 0.1 -0.66 -0.38 -0.45 -0.01 -0.13 -0.76 0.44 0.24 0.01 -0.23 0.26 0.29 -0.33 0.52
-2.22 -3.57 -2.57 -2.62 -2.54 -1.03 -1.02 1.61 2.27 1.87 -1.43 -2.98 -0.8 -0.8 -2.17 -0.34
1.33 0.68 -0.14 0.1 -0.17 -0.19 0.25 -0.94 -0.95 -0.91 0.09 -0.2 -0.1 -0.43 -1.24 0.43
0.75 -0.14 -1.24 -0.9 -0.4 -0.08 0.47 -0.42 -0.3 0.19 0.34 -0.09 0.28 -0.1 -0.13 0.47
-1.75 0.54 0.04 0.49 -0.22 -0.14 0.7 0.19 0.35 1.6 0.41 0.15 -2.54 -3.25 -5.74 -1.95
0.57 -0.37 -1.67 -1.88 -1.15 -1.76 0.91 -0.38 0.58 0.68 1.08 -0.8 0.14 -0.6 -1.03 0.77
2.22 -0.27 -1.21 -1.94 -0.8 -0.82 -4.61 -1.01 0.55 0.21 -1.16 -0.7 0.45 -0.14 -0.14 0.36
-1.94 -1.77 - - -4.44 -3.2 -0.76 2.53 1.26 0.67 -2.68 -3.9 0.56 0.01 -1.36 0.88
0.09 -2.68 -1.97 -2.26 -1.65 -1.44 1.16 0.65 -0.58 0.14 0.62 -0.39 0.72 0.54 -0.28 0.87
-0.02 -0.48 -0.62 -0.18 -0.09 -0.06 0.46 -0.51 -0.21 -0.18 0.81 0.15 0.26 0.22 -0.5 0.14
1.11 -0.94 -1.91 -2.15 -1.83 -0.86 0.15 -0.9 -0.23 0.58 0.7 -0.13 0.65 0.46 0.0 0.61
-0.08 0.91 -2.1 -1.55 -0.91 -0.23 -0.43 -0.1 0.89 1.62 0.43 0.6 -1.06 -1.67 -1.28 -0.87
0.28 -0.04 -2.99 -2.38 -2.33 -1.11 0.36 -0.09 0.21 -0.58 0.15 -0.76 1.01 0.65 0.59 1.0
-0.3 -1.8 -6.17 -6.25 -4.87 -6.62 -5.52 2.2 2.11 1.86 -6.51 - -0.73 -1.03 -1.82 -0.17
0.36 -0.35 -0.97 -0.91 -0.93 -0.86 1.42 -0.19 -1.29 -1.37 1.08 0.56 -0.51 -0.49 -1.23 1.03
0.41 -0.22 0.64 0.96 0.27 1.0 -0.02 -0.23 -0.37 -0.82 0.55 0.05 -1.18 -1.49 -3.19 -0.9
-0.63 -0.08 -1.77 -1.79 -1.47 -1.42 -0.41 0.36 0.7 0.36 0.25 0.34 0.76 0.66 -0.13 0.61
0.69 0.26 -0.8 -0.49 -0.46 -0.49 0.76 -0.42 0.24 0.56 0.55 0.23 -0.63 -0.7 -0.88 -0.12
-0.88 1.51 0.11 0.41 -0.92 -1.68 -0.01 1.56 -1.88 -3.23 -1.98 -0.89 0.17 -0.54 -0.56 0.8
0.6 -0.31 -3.09 -2.51 -2.05 -1.93 0.81 -0.12 -0.16 -0.3 0.82 0.08 0.8 0.55 -0.13 0.63
0.21 0.44 -2.25 -3.06 -1.38 -0.72 0.25 0.12 0.85 0.33 -0.42 -1.38 0.7 0.17 0.44 0.67
-0.08 -0.62 -0.52 -0.39 -0.16 0.03 0.43 -0.31 0.06 -0.02 0.27 -0.11 0.27 0.22 -0.24 0.59
1.14 0.4 -1.49 -1.36 -1.28 -0.73 0.0 -0.48 -0.03 -0.28 -0.19 -0.21 0.5 0.44 -0.1 0.8
-4.52 - -2.3 -0.74 -1.12 -0.95 1.04 0.09 - - - - 1.61 1.19 0.19 2.2
0.0 -0.52 0.18 0.41 -0.23 -0.24 0.14 -0.41 0.71 0.65 0.91 0.18 -0.96 -0.99 -1.52 -0.48
-1.24 0.75 -1.21 -1.11 -1.29 -0.43 0.46 0.36 -0.07 -0.35 1.74 1.45 -1.7 -2.25 -2.53 -0.5
-0.45 -0.34 0.54 0.62 1.34 -0.07 -1.21 -1.33 -0.98 -0.69 -0.4 -0.54 0.35 -0.09 0.15 0.36
-0.21 0.82 0.54 0.88 0.62 1.41 -0.97 -0.22 -0.32 0.14 -0.29 -0.86 -1.55 -1.78 -2.2 -1.35
0.45 0.06 -0.49 -0.24 -0.34 -0.18 0.37 -0.49 -0.46 -0.34 1.02 0.61 -0.23 -0.45 -0.63 0.07
0.23 -0.2 -1.25 -1.2 -0.68 -0.59 0.17 0.79 0.97 0.92 0.48 0.29 -0.54 -0.78 -0.94 -0.53
-0.98 0.82 -2.16 -1.47 -0.98 -0.91 1.72 -0.8 -0.87 -0.21 1.75 1.53 -2.7 -3.31 -4.56 -1.9
1.16 0.79 -3.0 -3.76 -2.79 -1.84 -1.29 -1.26 -2.13 -2.37 -1.0 -1.01 1.44 1.11 0.6 1.48
0.59 -0.09 0.17 -0.05 0.14 0.03 1.06 -0.43 -0.73 -0.8 0.07 -0.53 -0.1 -0.27 -0.62 0.22
0.31 -1.27 -2.42 -2.53 -1.47 -1.5 -0.5 1.06 0.21 0.98 -1.32 -0.89 0.31 0.56 -0.03 1.45
-4.02 -4.01 -8.37 -7.53 -6.4 -5.65 -3.43 1.93 2.72 2.33 -4.76 -6.44 -3.85 -3.96 -4.98 -3.03
-4.21 -1.41 -6.0 -6.41 -0.69 -0.67 1.94 -0.39 1.85 1.03 -7.66 -6.18 0.08 -0.22 -1.12 0.73
- -5.14 - -0.87 -3.34 - -5.13 -0.38 - - - - 2.12 1.17 0.25 2.75
-0.69 1.52 -0.27 0.07 -0.33 -0.83 -0.17 0.3 1.41 0.9 0.01 -0.03 -2.18 -3.58 -4.21 -1.89
-0.25 -2.46 -4.47 -4.15 -4.88 -3.66 -3.81 -0.37 -4.91 -4.64 -4.34 -5.45 1.92 2.0 0.89 2.05
-2.02 -0.86 - -5.04 1.02 0.58 0.26 1.26 0.7 -0.83 -1.53 -4.81 0.34 -0.56 -0.9 1.58
-0.27 0.64 -2.43 -1.44 -1.77 -1.03 0.9 -0.25 -0.31 -0.32 0.77 0.81 0.2 -0.04 -0.23 0.61
0.57 -0.0 -1.33 -1.42 -1.76 -1.01 0.5 -0.16 0.71 0.58 0.27 -0.68 0.2 -0.0 -0.59 0.91
0.95 -0.38 -1.62 -1.36 -1.0 -0.71 0.58 0.4 0.25 0.04 0.19 0.13 0.16 -0.01 -0.15 0.25
0.78 0.66 -2.21 -1.93 -1.44 -1.23 0.16 -0.48 -5.63 -5.15 -0.81 -0.88 1.19 0.9 0.62 1.46
-0.13 0.02 -2.54 -1.94 -1.04 -0.53 0.64 -0.86 0.18 0.64 0.35 -0.17 0.54 0.41 -0.31 0.93
1.01 0.23 -0.35 -0.75 -0.33 -0.41 0.18 -0.48 0.08 -0.2 -0.66 -0.59 0.45 0.06 -0.05 0.52
0.66 0.72 -2.26 -1.37 -1.49 -1.27 0.36 -0.49 -0.03 -0.11 0.3 0.38 0.56 0.25 -0.17 0.49
-8.86 - -0.41 -0.14 -0.09 -0.25 0.04 -0.56 -0.59 -0.98 -0.09 -0.88 1.25 0.71 0.66 1.39
-1.8 -0.67 -2.14 -1.35 -1.78 -1.12 0.6 0.36 1.62 1.81 0.56 0.08 -1.1 -1.21 -2.25 -0.51
0.6 0.16 0.12 0.35 0.54 0.32 0.52 -0.57 -1.16 -1.81 -0.51 -0.25 0.23 0.02 -0.62 0.09
-1.4 -0.12 0.29 0.73 0.07 0.28 -0.04 -0.88 0.94 1.36 0.4 0.22 -1.57 -2.05 -2.73 -1.54
0.21 -0.92 -1.01 -1.22 -0.28 -0.56 0.3 0.11 0.25 -0.13 0.42 -0.01 0.48 0.28 -0.0 0.62
0.79 -0.47 -1.34 -1.3 -1.3 -0.42 0.28 -0.08 0.46 0.66 0.82 0.01 -0.12 0.09 -1.8 0.53
0.29 0.3 -2.11 -1.34 -1.32 -0.59 0.48 0.54 -0.46 -0.4 0.69 -0.38 0.8 0.29 -0.26 0.41
-0.81 -0.37 -5.97 -6.22 -5.43 -4.0 -3.18 1.59 2.59 1.21 -5.29 -4.17 -0.29 -0.44 -0.97 -0.07
-0.31 0.33 -2.33 -2.45 -1.39 -1.59 -0.24 0.5 -0.14 0.17 -0.07 0.13 0.63 0.52 0.59 1.01
1.02 -0.61 -1.24 -1.54 -1.59 -0.91 0.6 0.06 -0.75 -0.95 -0.0 -1.12 0.91 0.67 0.15 0.99
-0.5 -0.33 -1.31 -1.01 -1.06 -0.79 0.8 0.84 1.65 1.24 0.33 -0.47 -1.19 -1.64 -2.21 -0.9
0.76 0.67 -2.01 -2.03 -0.91 -0.93 0.79 0.04 0.82 0.97 0.43 -0.37 -0.5 -0.97 -1.11 -0.18
-2.61 -4.62 -4.27 -6.15 - - 1.05 1.84 - - - - 1.63 0.81 0.13 2.05
0.74 -0.89 -2.99 -1.33 -2.28 -1.56 0.12 -0.55 -1.4 0.41 0.27 -0.96 1.01 0.35 -2.11 2.0
-0.33 -2.32 -1.21 -0.75 -0.65 -1.29 1.63 0.23 -1.81 -2.07 0.23 -0.2 0.51 0.56 0.2 1.03
1.24 -0.81 -1.08 -0.5 -0.64 0.22 0.37 -1.57 -0.41 -0.17 0.88 0.18 0.15 -0.14 -0.81 0.33
0.63 0.16 -0.34 -0.1 -0.48 -0.08 0.6 -0.08 0.1 -0.02 0.12 0.04 -0.17 -0.49 -0.4 -0.05
0.63 -0.84 0.87 1.43 1.28 1.16 -0.94 -0.48 -1.19 -2.06 -0.34 -0.59 -1.35 -1.61 -2.28 -1.28
0.17 -0.97 -1.51 -1.58 -1.18 -1.44 1.25 0.98 -0.02 -0.35 0.18 -1.25 0.51 0.09 -0.39 0.95
0.03 0.04 -1.56 -2.05 -1.6 -1.67 0.2 -0.08 0.23 0.08 0.16 -0.09 0.74 0.55 0.17 1.05
-3.28 -5.25 -0.2 0.43 -4.84 -7.33 1.51 0.79 - -6.66 -4.39 -5.73 1.25 1.08 0.35 1.68
-1.95 -4.33 0.32 -0.42 -0.6 0.93 1.04 -1.09 -0.98 -1.65 2.12 1.2 -1.34 -2.11 -2.52 -1.58
0.21 0.63 -1.34 -1.2 -1.29 -1.2 0.82 0.36 0.86 0.75 -0.07 -0.08 -0.05 -0.71 -1.3 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.