1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_239 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.38 -1.71 -1.55 -1.33 -1.11 -1.47 0.84 0.13 -0.15 -0.04 0.68 0.16 0.9 0.51 -0.08 0.72
-1.36 -1.87 -1.86 -1.33 -1.41 -0.68 0.88 0.1 0.35 0.56 0.84 0.55 0.68 0.3 -0.28 0.11
-2.52 -3.03 1.66 1.89 0.12 1.31 -2.85 -3.79 -7.22 -4.42 0.86 0.67 -0.98 -1.47 -1.95 -1.12
-0.73 -3.85 0.83 1.42 1.35 0.8 0.23 -0.74 -1.89 -1.04 0.24 0.3 -1.02 -1.0 -1.8 -1.41
-2.57 -5.46 -1.13 -1.47 -1.36 -1.05 0.15 0.14 -3.81 -3.29 0.77 0.03 1.83 1.38 -0.02 0.89
-0.86 -2.62 -0.36 0.81 0.27 0.07 0.1 -1.1 -0.19 0.95 1.44 1.14 -1.46 -1.94 -2.59 -1.13
-3.58 -5.82 -3.73 -3.77 -3.34 -4.38 0.84 0.23 -1.65 -3.33 -3.07 -2.46 2.0 1.62 0.78 1.65
0.48 0.85 -1.0 -0.18 -0.4 -0.74 0.7 -0.16 -0.54 -0.61 -0.08 0.03 0.27 0.23 -0.93 0.41
0.24 -0.04 0.65 1.0 0.58 0.44 0.32 -1.26 -0.46 -0.87 -0.34 -0.23 -0.06 -0.46 -1.1 -0.55
0.05 -0.98 0.32 0.55 0.49 0.05 -0.17 -0.59 -1.4 -2.16 0.79 -0.16 0.58 -0.03 -0.12 0.18
-2.66 -2.64 0.82 1.72 0.48 2.17 -1.15 -1.74 -0.55 -0.48 -0.4 -0.58 -1.44 -1.75 -2.59 -1.61
0.25 -0.43 -2.42 -2.34 -2.09 -1.26 0.5 0.04 -0.07 -0.57 0.8 0.63 0.81 0.62 0.17 0.33
0.56 -0.88 -0.35 -0.26 0.22 0.34 0.05 -0.51 -0.8 -0.39 -0.12 -0.89 0.77 0.46 -0.01 0.4
-0.67 -0.18 1.14 0.85 0.29 0.5 -0.47 0.08 -0.35 -0.02 -0.35 -0.22 -0.44 -0.46 -1.39 -0.31
-4.98 -6.73 -4.6 -2.15 -4.05 -1.76 0.1 0.92 -5.61 -4.55 -3.93 -2.03 2.14 1.51 1.03 1.44
-1.28 -6.26 -6.72 - -4.26 -4.43 -3.22 -0.06 -3.06 -3.39 -2.66 -2.99 2.26 1.86 1.48 1.44
0.56 -1.45 -1.68 -1.76 -1.58 -1.0 0.04 -0.21 - - - - 1.99 1.4 0.93 1.2
-1.24 -1.18 -3.12 -3.37 -2.67 -3.25 0.25 -0.33 1.09 1.55 0.57 -0.31 0.96 0.35 -1.01 0.68
-0.16 -0.33 -0.19 0.32 -0.07 -0.31 0.56 -0.28 -0.0 -0.16 0.14 -0.77 0.6 0.19 -0.35 0.15
0.02 -2.88 -4.21 -5.64 -2.91 -3.47 -1.6 -1.37 - - -4.63 -3.49 2.02 1.9 0.83 2.05
-3.66 -7.17 -4.52 -5.65 -4.45 -3.59 -2.51 -0.33 - - - -5.62 2.19 2.51 1.08 1.23
-0.25 -0.83 -0.22 -0.16 0.41 -0.31 -0.35 0.22 1.04 -0.11 0.01 -0.25 0.39 -0.24 -1.03 0.37
0.04 -2.33 -3.45 -2.89 -2.62 -1.68 -0.33 -1.25 -2.32 -1.23 0.22 -0.88 1.76 1.58 0.57 1.41
0.16 -0.78 -0.78 -0.71 -0.52 -0.01 0.87 -0.24 0.02 0.06 0.58 -0.26 0.37 0.32 -0.78 0.31
-2.13 -4.12 0.13 0.35 0.78 -0.05 1.38 -0.01 -4.01 -3.69 -2.82 -2.37 1.35 0.67 -0.42 0.76
1.99 -0.84 -2.88 -3.43 -1.11 -0.47 -1.1 -0.72 -2.9 -3.84 -1.48 -1.26 1.19 1.02 0.64 1.1
-0.88 -1.04 -2.79 -3.9 -1.65 -3.49 -1.37 0.21 0.0 -0.11 -0.07 -0.81 1.71 1.03 0.03 1.59
0.52 0.11 -1.26 -3.23 -1.0 -0.94 -0.46 -1.04 -3.01 -2.78 -0.41 -0.77 1.33 1.29 1.2 0.89
0.51 0.54 -3.37 -3.75 -3.65 -3.07 -2.09 0.31 0.87 1.11 0.07 -0.41 0.65 0.69 -0.29 0.58
-0.51 -1.96 -3.13 -3.09 -2.14 -3.22 0.99 2.77 -2.56 -2.61 -0.52 -0.01 0.42 0.35 -1.82 -0.48
0.25 -0.05 -0.76 -0.57 0.08 -0.21 0.07 -1.02 -0.52 -0.69 0.32 -0.02 0.69 0.57 -0.26 0.72
-0.67 -1.31 0.41 0.59 0.4 0.2 -0.11 -0.74 -0.85 -0.92 0.91 0.81 0.15 -0.4 -0.57 -0.19
-2.02 -1.96 -0.99 -1.42 0.5 -0.73 -0.75 -1.33 -1.81 -2.83 -1.72 -2.27 1.78 1.6 0.46 1.51
0.13 -0.77 -1.69 -0.89 -1.25 -0.92 0.91 -0.46 0.21 -0.22 0.63 0.81 0.69 0.29 -0.97 0.32
0.08 -5.43 1.09 1.4 0.97 0.86 -1.98 -2.55 -4.68 - -2.06 -1.99 0.8 0.45 -0.44 0.66
0.23 -1.36 -0.83 -1.35 -0.74 -1.09 -0.44 -1.13 -1.81 -1.68 -1.06 -1.56 1.73 1.21 0.44 1.5
-5.24 - -0.75 -0.49 -4.84 -4.85 1.42 1.05 - - - - 2.24 0.87 0.51 0.89
0.69 -0.39 0.44 0.99 -0.35 -0.76 -0.47 -1.08 -0.61 -1.05 -0.89 -1.05 0.83 0.58 -0.12 0.45
0.34 -0.51 -2.55 -2.54 -1.97 -1.57 0.11 -1.03 -1.48 -0.73 0.46 0.14 1.2 1.22 0.62 0.95
0.55 1.78 -1.48 -1.75 -0.33 -0.17 -1.17 -0.98 -1.32 -1.61 0.45 -0.57 0.56 0.11 -0.05 0.61
0.86 -0.7 -1.35 -2.29 -1.08 -0.95 0.7 -0.26 -1.04 -1.02 -1.25 -1.84 1.31 1.1 0.79 0.59
0.51 -0.4 -1.72 -1.08 -0.94 -0.8 0.81 0.2 0.35 0.23 0.79 0.35 0.25 -0.0 -1.15 -0.08
-1.89 -0.47 1.87 1.47 0.53 0.23 -0.98 -0.08 0.43 -0.02 -1.71 -1.59 -1.14 -0.74 -3.48 -1.33
0.91 -0.05 -3.02 -2.47 -1.83 -1.36 -2.61 -1.53 -0.94 -1.09 -1.44 -1.88 1.69 1.55 0.45 1.34
-0.43 -0.11 -0.6 -0.16 -0.17 -0.89 0.04 0.91 0.62 0.48 -0.36 -0.39 0.31 0.23 -0.66 -0.1
0.21 -0.48 -0.77 -0.32 -0.63 -0.73 0.2 -0.41 0.02 -0.48 0.28 -0.13 0.91 0.51 -0.62 0.82
0.57 0.3 -1.47 -1.1 -0.87 -0.44 0.24 -0.1 0.14 -0.32 0.52 -0.03 0.7 0.05 -0.28 0.34
0.15 -0.9 0.61 1.3 0.58 0.85 0.2 -0.78 -1.02 -0.6 0.18 -0.45 -0.49 -0.89 -1.12 -0.7
-0.05 -1.65 -0.45 -0.13 -0.2 -0.17 1.12 0.37 -0.19 -0.17 0.6 -0.61 0.28 0.0 -1.12 0.3
0.33 -0.59 -5.87 -4.96 -2.83 -1.34 0.23 -0.19 -0.0 -0.2 0.83 -0.21 1.11 1.04 -0.03 0.8
-0.2 0.2 - - - -9.47 -8.29 1.07 -5.77 -6.34 - - 1.83 1.88 1.02 1.36
-5.74 -4.42 -2.45 -3.7 -1.24 -2.35 -0.46 -0.85 -4.98 -5.07 -0.95 -0.91 2.17 2.25 0.17 1.18
0.09 0.08 -1.28 -0.64 -1.26 0.23 0.06 0.31 1.27 0.7 0.74 -0.26 -0.55 -0.79 -0.97 -0.64
-0.88 0.08 -3.2 -3.22 -1.14 -0.78 0.01 -0.61 0.01 0.33 1.28 0.94 0.76 0.42 -0.92 0.38
-0.65 -5.52 -3.67 -3.78 -2.72 -2.08 -0.56 -0.64 -5.95 -5.7 -2.74 -2.21 2.17 1.75 1.03 1.67
- - -2.05 -1.6 -2.86 -2.05 0.5 0.07 -1.42 -0.82 -0.47 -1.88 1.6 1.19 0.23 2.06
-1.5 -2.82 -1.93 -1.99 -1.68 -1.25 0.9 0.45 -1.32 -1.42 0.23 -0.19 1.53 0.99 0.14 1.16
-2.16 -2.82 -4.05 -4.05 - -3.83 -0.8 -0.61 - - -3.39 -2.12 2.01 1.51 1.72 1.89
-0.6 -0.96 0.7 0.91 0.3 0.78 -0.56 -1.04 0.37 0.24 0.7 0.57 -1.03 -1.55 -1.83 -0.95
-2.21 -2.75 -5.71 -6.7 -3.58 -3.68 -5.12 0.49 -0.62 -1.32 -2.91 -3.23 2.17 1.96 0.9 1.31
0.4 -1.74 0.76 1.07 1.31 1.07 -0.06 -2.06 -1.35 -0.78 0.17 0.11 -0.98 -1.53 -2.01 -0.95
-0.08 -1.3 -4.1 -4.63 -3.64 -2.57 -0.54 0.27 -3.0 -2.99 -0.37 -0.21 1.58 1.73 0.76 1.32
0.11 -1.38 0.37 0.55 0.43 -0.03 1.35 -0.02 -0.65 -0.62 1.05 -0.05 -1.07 -1.09 -2.13 -1.2
-0.39 -0.35 -3.24 -3.97 -3.11 -2.08 -0.22 -1.07 -0.11 -0.84 0.84 -0.07 1.25 1.4 0.78 0.7
-0.81 -6.08 - - - -10.64 -10.27 -0.73 -8.87 -9.98 - -10.47 2.14 2.05 1.28 1.93
0.7 -0.23 -2.16 -3.02 -2.2 -1.68 0.38 -0.32 0.45 0.69 0.13 0.07 0.88 0.29 -0.54 0.74

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.