Heatmap: Cluster_311 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - - - - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
- - -0.12 2.17 -2.34 -0.44 - - -0.81 - 1.99 2.35 - - - -
- - - - - 4.0 - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- 4.0 - - - - - - - - - - - - - -
- - 1.35 3.09 1.78 -1.34 -3.03 - - - -0.6 -1.71 - - - -
-1.64 3.31 - -0.25 2.3 - - - - - - - - - - -
- - 4.0 - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
3.4 - - - - - - - - 2.43 - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- 1.27 2.11 3.0 -1.57 -1.14 -2.37 -5.37 - - -2.01 - - - - -
-7.45 - -2.65 -3.78 -2.76 -4.14 - -4.42 2.8 1.97 1.38 1.01 - - - -
2.12 2.91 - - - - - 1.69 - -0.17 - - - - - -
- - - - - - - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
-7.39 - 2.11 1.8 2.29 1.73 -6.8 - - - - - - - - -
- - - - - - - - - - - - - - - -
- - 1.53 3.13 - - -1.77 - - - 1.18 0.85 - - - -
- - 1.84 -0.17 1.6 -1.02 2.66 -5.66 - - -1.76 0.47 - - - -
- - 2.64 - 2.36 - 2.2 - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
4.0 - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - -0.42 - - - 3.67 -1.67 - - -0.11 0.37 - - - -
- - - - - - - - 2.79 3.08 -3.13 -0.91 - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
2.08 - - -0.16 1.1 0.06 - 1.44 - - 1.87 0.39 - - - -
- - - - - - - - - - 3.95 -0.75 - - - -
- - - - - - - 4.0 - - - - - - - -
- 3.51 - - - - - -5.0 0.77 1.54 - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.