Heatmap: Cluster_117 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G045500.1	-	-	-0.22	1.12	-1.67	1.33	0.11	-1.28	1.09	-0.17	0.45	-	-	-	2.09	-
Sobic.001G099600.1	-4.44	-	2.01	1.16	1.87	1.78	-1.16	0.08	-4.09	-	-	-1.78	-	-	-0.77	-2.87
Sobic.001G110100.1	3.93	-	-3.22	-5.69	-	-1.67	-	-8.69	-	-	-	-	-	-	-1.56	-
Sobic.001G133100.2	4.0	-	-9.71	-	-	-9.74	-	-12.39	-	-9.06	-	-9.13	-	-	-5.25	-
Sobic.001G153000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.001G293666.1	1.11	-	-	-	-	-	-	-	2.23	0.7	-	-	-	-	2.91	-
Sobic.001G362900.1	-	-	3.2	-	1.46	-	-	-1.49	-	-	-	0.71	-	-	1.05	-
Sobic.001G364300.1	-	3.99	-6.95	-6.61	-	-6.97	-	-	-	-	-	-	-	-6.14	-4.07	-
Sobic.001G452400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G044200.1	-	-	-	-	1.87	-	-	-	-	-	-	-	-	-	3.63	-
Sobic.002G157950.1	-	-	-	-	-	-	-	-	-	-	-	1.42	-	-	3.74	-
Sobic.002G185600.1	-2.52	-	0.9	0.11	2.4	1.71	1.47	-4.61	-2.37	-3.54	-1.15	-0.92	-3.82	-4.92	-3.43	-4.53
Sobic.002G284000.1	-	-	2.72	1.81	0.71	-0.12	-3.39	-2.47	-	-	-0.15	0.92	-	-	-1.83	-
Sobic.002G397300.1	-	-	-	-	-	-	-	0.86	-	-	-	-	-	-	3.83	-
Sobic.002G399400.1	0.84	3.2	-1.37	-	-	-0.82	-	-	-	-	-0.7	-0.81	-	-	1.52	-
Sobic.003G081500.1	-	-	1.64	-	-0.68	-2.91	-0.09	0.96	1.87	2.2	-0.35	-2.22	-	-	-	-
Sobic.003G140200.1	-4.23	-	1.29	0.22	1.82	2.71	0.89	-5.51	-	-	-	-3.88	-	-	-1.55	-
Sobic.003G206100.1	-10.13	4.0	-	-7.95	-11.17	-	-	-11.37	-	-	-	-	-	-10.48	-8.41	-
Sobic.003G208700.1	-	-0.89	2.88	2.57	-	-4.31	-3.36	0.59	-	-	-	-2.72	-	-	-1.38	-
Sobic.003G232800.1	1.5	1.06	1.8	2.14	-0.53	-1.69	-1.33	0.38	-	-	-	-1.08	-	-	-	-
Sobic.003G324900.1	-1.12	1.9	-1.74	-0.39	0.37	-	-0.83	-2.12	-	-	-1.01	-	-	0.65	2.72	-
Sobic.003G391800.1	-	-	-	-	-	0.91	-	-	-	-	-	-	-	-	3.82	-
Sobic.004G086900.1	-	0.31	-	-	-	-	-	-	-	-	-	-	-	-	3.88	-
Sobic.004G101000.1	-	-	2.07	1.99	1.13	1.16	-	-4.04	-	-	0.28	-	-	-	1.08	-
Sobic.004G132400.1	-1.85	-	-1.77	-0.35	-1.05	-0.64	-0.53	2.14	-0.62	-2.56	1.21	2.33	-	-	-1.88	-
Sobic.004G185300.1	-2.29	-0.47	-1.46	-	0.99	-	0.46	-	-	-	2.81	2.12	-	-	-	-
Sobic.005G059550.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.005G103100.1	-0.78	-2.55	-1.89	-0.55	-	2.17	-	-	-	0.36	-1.19	0.7	-	-1.08	2.57	-
Sobic.005G140900.1	-0.16	3.86	-	-	-	-	-	-	-	-	-	-	-	-	-0.84	-
Sobic.005G165850.1	-	-	-	1.17	-	-0.2	-	0.71	1.74	0.48	-	-	-	-	2.7	-
Sobic.005G171500.1	-	-	-	-	-	-	0.16	-4.43	-	2.61	-	-	-	-	3.13	-
Sobic.005G223450.1	-	-4.14	1.76	1.98	0.3	0.03	1.24	-4.67	-5.41	-3.17	1.1	0.65	-5.37	-5.88	-4.0	-5.49
Sobic.005G224500.1	-10.91	-7.95	1.17	0.76	1.63	1.38	1.01	1.94	-1.87	-5.05	-4.28	-2.91	-9.24	-10.34	-5.94	-
Sobic.006G015000.1	-	-	2.02	1.68	2.33	-0.37	0.13	-	-	-	-1.4	-1.09	-	-1.25	-0.77	-
Sobic.006G028600.1	0.32	3.78	-	-	-4.93	-2.51	-	-2.57	-4.5	-4.44	-	-	-	-4.24	-1.17	-
Sobic.006G029200.1	-	-	-0.7	1.63	2.89	1.85	-	-1.76	-	-	-0.04	-	-	-	-	-
Sobic.006G032000.1	-2.16	3.75	-	-2.6	-	-	-	-	-	-	-2.26	-	-	-	0.96	-
Sobic.006G180100.1	-4.28	-3.24	1.92	1.52	1.93	0.52	0.31	-2.31	-0.76	-2.28	-1.02	-0.18	-	-	-1.61	-
Sobic.007G023650.1	-	-	3.25	-	1.57	0.42	-	-	-	1.11	-	-	-	-	-	-
Sobic.007G047200.1	-0.5	-0.7	-3.18	-	0.76	-1.63	1.85	-0.66	-0.96	0.27	0.48	-0.04	-1.26	-0.78	1.29	-0.39
Sobic.007G085100.1	-	3.36	-	-	-	2.52	-	-	-	-	-	-	-	-	-	-
Sobic.007G158500.1	-	-	1.64	2.05	0.65	2.27	-3.35	-4.82	-2.76	-2.32	0.0	-0.26	-	-	-4.74	-
Sobic.007G202100.2	-	-	0.78	-0.63	1.84	2.0	-0.21	1.17	-	-	-	0.01	-0.63	-	0.35	-
Sobic.008G009100.1	-3.45	-	2.18	1.97	-2.54	1.61	-0.35	-1.24	0.47	-2.05	-	-2.12	-	-	0.21	-
Sobic.008G064800.1	-	-1.24	-	-	-	-	-	-	3.33	2.46	-	-	-	-	-	-
Sobic.008G122200.2	-	-	-0.58	1.33	-0.03	1.79	-	-	-	-	1.3	1.39	-	-	1.72	-
Sobic.008G127800.2	-	-	-	0.88	-	3.51	1.46	-	-	-	-	-	-	-	-	-
Sobic.008G170400.1	1.11	-	-	-	-1.89	-	2.33	2.5	-	-	-	0.12	-	-	0.87	-
Sobic.009G017100.2	-	-	0.68	2.41	0.86	2.49	-	-	-	-	-	-0.04	-	-2.97	-0.9	-
Sobic.009G134766.1	-	0.24	1.09	1.95	1.21	1.58	-	-1.8	-	-	-	-1.13	-	-0.9	1.17	-
Sobic.009G174866.1	-	-	-	0.41	0.2	1.63	0.99	2.41	-	-	-	1.65	-	-	-	-
Sobic.009G205700.1	-6.72	-	-0.11	-0.6	-1.19	-0.96	1.18	0.92	1.26	2.08	0.03	0.7	-	-5.14	-	-
Sobic.010G108100.1	-	3.32	-	-	-	-	-	-0.78	-	-	-	-	-	-	2.45	-
Sobic.010G113500.1	-	-	-	1.9	-0.79	-	-	-	-	-	2.61	2.37	-	-	-1.26	-
Sobic.010G174100.1	-	-1.09	0.1	-0.25	2.14	0.64	2.73	-4.55	-	-	-	-	-	-	-0.01	-
Sobic.010G232300.1	-0.82	3.86	-	-	-	-3.33	-	-3.65	-	-	-	-	-	-	-0.42	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.