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Heatmap: Cluster_152 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.26 -0.14 0.02 0.18 0.48 0.26 0.88 0.02 -0.24 -0.47 0.29 0.32 -0.69 -0.95 -1.23 -0.54
-0.27 -1.1 -0.56 -0.16 -1.03 -0.84 0.81 0.36 0.6 0.08 0.77 0.55 0.11 -0.41 -0.99 -0.05
0.22 -0.95 -0.96 -1.1 -0.78 -0.56 1.06 0.44 -0.2 -0.6 0.78 0.19 0.27 0.15 -0.69 0.39
-0.83 -2.25 -0.13 0.03 -1.14 -1.41 1.27 1.22 1.45 0.44 1.13 -0.71 -1.71 -2.43 -3.61 -1.85
0.17 -0.74 -0.55 -0.45 -0.11 0.03 0.58 0.16 -0.34 -0.16 0.05 -0.63 0.44 0.07 -0.24 0.75
-0.3 -0.23 -0.19 0.35 -0.38 -0.14 0.49 0.19 0.7 0.79 0.29 0.01 -0.53 -1.02 -1.08 -0.47
0.23 0.27 -0.27 -0.28 0.06 0.13 0.6 -0.33 0.35 -0.17 -0.05 -0.25 -0.05 -0.28 -0.2 -0.15
-3.36 -2.03 -1.91 -2.0 -2.07 -0.97 0.64 1.12 2.41 1.74 -0.12 -1.19 -2.07 -2.67 -3.32 -2.66
0.65 -0.65 -0.32 -0.09 0.66 0.33 0.59 0.73 -5.44 -5.11 -0.61 -0.78 0.67 0.05 -0.44 0.5
-3.07 -2.39 -6.42 -4.57 -4.57 -3.31 -1.43 1.64 2.58 2.24 -1.72 -2.43 -1.7 -2.26 -3.53 -2.39
0.79 0.28 -1.36 -1.41 -0.85 -0.79 0.86 0.7 0.13 0.05 -0.14 -0.9 0.19 -0.08 -0.39 0.39
-0.11 0.18 -1.36 -0.95 -1.14 -0.98 0.87 0.26 0.19 0.14 0.91 0.67 -0.21 -0.3 -1.14 0.28
0.26 -0.37 -0.56 -0.3 -0.17 0.27 0.7 -0.05 0.26 0.03 0.43 0.37 -0.19 -0.84 -0.71 -0.06
0.07 -0.11 -1.09 -1.03 -0.4 -0.62 1.01 -0.36 0.72 0.55 1.0 0.26 -0.48 -0.93 -0.92 -0.37
-1.68 -1.3 -1.39 -1.08 -1.77 -0.98 1.38 -0.43 0.26 -0.28 0.88 -1.06 1.37 -0.15 -0.3 0.7
0.83 -0.7 -1.51 -1.15 -1.1 -0.14 0.22 -0.02 -0.02 -0.18 0.46 -0.54 0.72 0.4 -0.32 0.66
-0.03 -0.62 -0.15 0.14 -0.25 -0.12 0.45 0.21 0.58 0.54 0.45 -0.06 -0.16 -0.51 -1.39 -0.28
0.6 -5.86 -2.08 -2.49 -1.98 -1.19 -0.68 0.23 -3.22 -1.16 -3.28 -1.95 1.81 1.39 0.36 1.69
2.78 -1.92 -3.96 -3.81 -1.74 -1.82 -0.44 -0.61 -2.2 -3.97 -1.37 -3.8 0.75 0.31 -1.45 1.44
-3.97 -5.44 -5.67 - -0.91 -1.68 1.16 0.21 0.57 -0.59 0.31 -0.95 1.49 0.47 -0.03 1.37
0.92 0.04 -0.82 -0.45 -0.35 -0.33 0.63 -0.28 0.07 -0.56 0.75 0.34 -0.17 -0.48 -0.77 -0.05
-0.13 -0.73 -1.21 -0.7 -0.86 -0.24 0.74 0.35 0.7 0.57 0.51 0.05 0.08 -0.2 -0.63 -0.06
1.78 -0.18 -1.72 -1.17 -1.03 -0.34 0.22 -0.54 0.04 -0.31 0.9 0.58 -0.27 -0.67 -1.19 -0.5
-0.65 -0.94 0.63 1.14 0.48 0.96 0.34 -1.0 -3.22 -3.32 1.01 0.65 -0.44 -1.01 -1.53 -0.68
0.15 -1.56 -2.18 -1.75 -0.75 -1.94 0.68 1.42 0.98 1.36 0.64 -0.22 -0.72 -1.25 -1.67 -0.72
0.71 -0.97 -0.44 -0.67 -0.04 0.35 0.56 -0.84 -0.88 -0.17 0.56 -0.21 0.29 0.04 -0.41 0.52
0.9 -0.54 -0.7 -0.51 -0.17 -0.05 0.86 -0.52 0.1 0.42 1.08 -0.04 -0.5 -1.36 -1.48 -0.31
0.33 -0.41 -0.84 -0.79 0.48 -0.04 0.33 0.27 0.45 0.54 0.99 -0.17 -0.39 -1.08 -2.25 -0.21
0.84 0.63 -1.69 -1.55 -0.98 -0.65 -0.15 -0.34 0.28 0.22 0.84 0.5 0.07 -0.37 -0.7 0.2
-0.11 -0.63 -0.61 -0.41 -1.76 -0.12 0.89 0.25 1.51 -0.88 0.82 0.55 -0.32 -1.35 -2.03 -0.52
-0.31 -1.01 -1.25 -0.56 -1.59 -1.33 1.08 -0.02 -0.06 -0.08 1.19 0.3 0.39 -0.06 -0.54 0.49
0.61 -1.47 -2.0 -2.38 -1.14 -0.96 -0.57 1.29 1.8 1.22 -0.75 -1.64 -0.18 -0.79 -0.98 -0.17
1.43 -0.61 -0.85 -0.64 -0.65 -0.29 0.07 -0.28 -1.09 -1.51 -0.43 -1.37 0.86 0.6 0.02 0.87
1.08 -0.2 -0.83 -1.03 -0.53 -0.12 -0.44 -0.43 -0.18 -0.04 0.25 -0.8 0.75 0.14 -0.42 0.78
-0.88 -0.81 -3.31 -2.7 -2.44 -1.16 -1.21 0.19 1.22 0.96 0.32 -0.69 0.97 0.34 -0.06 1.07
0.85 -0.86 -1.27 -1.1 -1.45 -0.51 0.08 0.24 -0.35 -0.45 -0.29 -1.22 1.0 0.63 -0.29 1.23
-0.88 -0.47 -0.73 -0.26 -0.63 -0.58 0.49 -0.15 0.8 0.78 0.99 0.63 -0.3 -0.98 -1.07 -0.18
-0.44 -2.47 -1.46 -1.75 -1.2 -0.84 0.36 1.39 -0.08 0.52 0.47 0.27 0.67 -0.1 -0.77 0.53
0.66 -1.23 -0.43 -0.93 -0.17 -0.01 0.16 -0.39 -0.75 -1.01 0.88 0.61 0.27 -0.09 -0.12 0.53
0.13 -0.01 -0.26 0.22 -0.22 -0.1 0.26 -0.55 0.58 0.72 0.78 0.28 -0.66 -1.28 -1.43 -0.42
0.35 -0.33 -0.88 -0.65 -0.41 -0.03 0.59 0.59 -0.69 -1.25 0.57 -0.06 0.46 0.21 -0.48 0.35
0.45 -0.12 0.12 0.31 0.55 0.24 0.28 -0.56 -0.62 -0.42 0.71 0.19 -0.33 -0.77 -1.29 -0.17
0.88 -0.04 -1.0 -0.96 -0.96 -0.64 0.64 -0.32 -0.75 -0.17 0.89 0.68 0.14 -0.16 -1.13 0.34
-0.34 -1.91 -1.23 -1.13 -0.81 -1.01 1.18 0.46 0.14 0.19 0.73 -0.05 0.53 0.2 -0.45 0.23
-0.33 -0.9 -0.45 0.16 0.02 -0.37 0.24 -1.29 -0.85 -1.05 -0.34 -0.89 1.16 0.61 0.39 1.0
0.64 0.37 -0.33 0.03 -0.38 -0.23 0.12 -0.39 0.46 0.3 0.57 0.22 -0.38 -0.84 -1.03 -0.36
-0.2 -0.91 -0.65 -0.91 0.22 -0.2 0.62 0.13 0.35 0.07 0.33 0.3 0.24 -0.03 -0.55 0.14
0.7 -0.01 -2.28 -2.61 -2.35 -1.84 -0.03 -0.12 -0.33 -0.46 -0.11 0.12 1.0 0.82 0.4 1.02
0.64 -0.51 -1.38 -1.14 -1.11 -0.46 0.55 -0.18 0.06 0.3 0.55 -0.01 0.38 0.07 -0.15 0.47
-0.04 -0.95 -1.29 -1.16 -1.21 -1.09 0.98 -0.31 -0.06 0.09 0.97 0.09 0.61 0.16 -0.14 0.46
0.53 -1.17 -1.92 -1.87 -1.77 -1.64 0.93 0.4 -0.97 -1.59 0.69 -0.42 0.9 0.6 -0.2 1.19
0.77 -0.76 -1.01 -1.03 -0.39 0.2 0.6 -0.08 0.47 0.64 0.45 -1.04 -0.02 -0.17 -0.72 0.08
0.41 -0.21 -0.75 -0.28 -0.26 0.46 1.0 0.0 -0.7 -1.18 1.02 0.68 -0.37 -0.99 -1.17 -0.36
0.18 -0.64 -0.57 -0.38 -0.04 -0.65 1.2 0.61 -0.52 -0.56 -0.53 -1.05 0.79 -0.16 -0.59 0.58
0.19 -1.11 -0.36 -0.57 0.21 0.11 0.76 -0.33 -1.12 -0.29 0.24 0.33 0.35 0.15 -0.26 0.36
-1.48 -2.06 -2.89 -2.41 -2.32 -1.89 -0.11 1.19 2.11 1.97 -0.13 -1.2 -0.94 -1.48 -1.88 -0.55
0.21 0.3 0.31 0.55 0.04 0.45 0.07 -0.28 -1.66 -2.82 0.82 0.61 -0.18 -0.59 -1.06 -0.21
0.11 -1.04 -1.9 -1.48 -1.46 -0.83 0.83 0.07 0.49 0.66 0.2 -0.57 0.8 0.29 -0.35 0.59
0.31 1.03 -2.56 -2.34 -2.13 -1.22 0.23 0.5 -2.31 -2.1 0.01 -0.33 1.2 0.66 -0.54 1.21
-0.29 -0.38 -0.19 -0.05 -0.3 -0.57 0.65 0.25 0.78 0.81 0.69 0.05 -0.64 -1.08 -1.78 -0.32
-0.04 0.15 -0.96 -0.73 0.71 0.52 1.11 -0.54 -1.43 -0.21 0.52 0.51 -0.23 -0.51 -1.13 -0.37
1.09 -1.44 -1.91 -2.38 -1.04 -0.75 -0.27 -1.19 -2.26 -1.9 0.14 -0.96 1.38 1.04 0.83 1.11
0.88 0.1 -1.16 -1.2 -0.19 -0.19 0.43 -0.09 0.28 -0.03 0.66 0.07 0.05 -0.57 -1.02 0.18
0.03 -0.0 -0.62 -1.21 -0.23 -0.19 0.67 -0.09 0.41 0.38 0.24 -0.03 0.29 -0.16 -0.75 0.18
0.11 -0.32 -1.03 -0.43 -0.43 -0.19 0.39 0.08 0.12 0.15 0.31 -0.24 0.48 0.03 -0.5 0.57
-2.67 -2.71 -0.11 -1.14 -0.22 -1.65 0.89 1.89 0.64 2.06 -0.52 -1.37 -1.93 -2.54 -3.4 -2.05
0.23 -1.97 0.09 0.35 0.16 1.44 0.33 -0.32 -0.54 -0.97 0.79 0.44 -0.47 -1.25 -1.56 -0.8
0.45 0.32 -2.13 -1.53 -1.57 -0.57 0.62 -0.11 0.48 0.04 0.65 0.1 0.59 -0.07 -0.7 0.27
1.46 -1.29 -0.47 -0.54 -0.02 0.19 0.31 -0.63 -0.91 -0.08 1.17 0.44 -0.58 -0.79 -1.14 -0.65
1.42 -1.0 -0.97 -0.47 -0.87 -0.12 0.68 -0.45 -0.33 0.09 0.11 -0.35 0.36 -0.07 -0.45 0.16
0.05 -0.65 -1.12 -0.89 -0.54 -0.2 0.57 -0.09 0.61 0.31 0.95 0.82 -0.18 -0.68 -1.63 0.08
-0.65 -1.97 -0.37 -0.15 -0.24 -0.35 1.17 -0.03 -1.32 -1.79 1.81 1.47 -1.15 -1.52 -1.78 -0.96
1.43 -2.24 -0.98 -1.53 -0.56 -0.3 1.02 0.09 -3.59 -4.71 0.93 0.58 0.29 0.08 -0.8 0.37
1.84 -0.01 -0.87 -0.09 -0.43 0.63 -0.23 -0.84 -0.3 -0.37 0.25 -0.23 -0.29 -0.95 -1.16 -0.27
-0.71 -0.95 -0.17 0.29 -0.01 0.48 0.28 0.05 0.31 0.42 0.77 0.07 -0.3 -0.76 -1.39 -0.01
0.08 -1.64 0.59 0.6 0.09 -0.06 0.79 0.03 -2.19 -2.53 0.6 -0.37 0.41 -0.13 -0.66 0.35
-0.48 -1.68 -1.85 -2.03 -1.71 -1.52 1.42 0.89 -0.28 -0.59 0.78 0.09 0.77 0.15 -0.1 0.31
0.64 -0.5 -0.82 -0.34 -0.29 -0.05 0.41 -0.29 0.09 0.31 0.78 0.2 0.04 -0.57 -0.77 -0.02
0.3 -0.64 -0.79 -0.88 -0.33 -0.09 0.5 -0.16 -0.35 -0.56 0.48 -0.03 0.61 0.28 0.02 0.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.