Heatmap: Cluster_48 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G021100.2	-0.06	2.5	-	-	-	-	-	1.57	2.69	-	-	-	-	-	-	-
Sobic.001G038601.1	-	-0.66	0.3	-	0.39	-	-	2.37	1.91	1.96	-	-	-	-	-	-
Sobic.001G039200.1	-	-	0.73	0.93	0.78	1.19	2.6	-3.6	-3.14	-	-0.46	0.55	-	-	-	-
Sobic.001G101650.1	-	-	-	-	-	-	-	-	-	-	-	-	2.3	-	3.47	-
Sobic.001G117000.1	-0.08	-1.85	-	-	1.21	1.32	-	-0.74	-0.64	0.41	0.45	-0.66	1.67	-0.42	-	0.55
Sobic.001G128500.1	-	-3.02	1.49	1.92	1.77	2.01	-0.59	-4.66	-	-	-1.8	-1.04	-3.44	-4.15	-2.35	-5.18
Sobic.001G160400.1	-	-	1.59	1.6	0.96	2.36	1.27	-7.31	-	-	-2.99	-1.51	-	-	-	-
Sobic.001G275100.1	1.63	-2.5	-	-3.89	-	-	-5.16	2.35	1.89	1.93	-5.55	-5.65	-	-	-	-
Sobic.001G279500.1	-	-	2.7	1.12	0.55	2.07	-2.71	-	-	-	-2.33	0.15	-	-2.22	-	-
Sobic.001G291200.2	-	-	-1.88	-1.14	-2.11	0.96	0.57	-2.9	-2.57	-0.49	2.39	2.42	-	-	-	-
Sobic.001G326000.1	-	-3.5	3.73	0.76	-	-	-	-	-	-	-	-	-	-	-0.02	-
Sobic.001G342101.1	2.48	1.85	-	-	-	-	1.38	-3.06	-	-	1.0	1.06	-	-	-	-
Sobic.001G377500.1	-0.86	-4.05	-	-3.52	-	-5.47	-	3.83	-2.53	-0.27	-4.76	-	-	-	-	-
Sobic.001G450900.1	2.46	-	0.55	-0.7	0.1	-1.39	0.26	-1.1	-	-	1.48	1.12	-	-	-	-1.57
Sobic.001G490950.1	0.94	3.67	-3.93	-2.86	-3.8	-3.55	-6.19	-8.16	-0.91	-1.99	-4.27	-	-4.6	-4.7	-3.63	-
Sobic.001G523400.2	2.3	1.52	-	-	-	-	-	-	-	-	-	-	-	3.03	-	-
Sobic.001G530300.1	-	0.48	-	-	-	-1.84	-	-3.45	-	-	-1.14	-	-	3.54	1.09	-
Sobic.002G015200.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G033000.1	-1.59	3.31	-	-	-7.5	-4.21	-6.72	2.45	-	-4.19	-6.96	-4.74	-	-	-3.74	-
Sobic.002G093500.1	-3.46	3.21	-5.65	-5.49	-6.69	-4.27	-6.49	-5.54	0.54	2.34	-7.15	-7.26	-	-	-	-
Sobic.002G099401.1	-	-	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-
Sobic.002G122500.1	-	3.1	-	-	-3.1	-0.68	2.53	-0.38	-	-	-2.57	-	-	-	-	-
Sobic.002G154700.2	-	-	1.26	-1.73	1.39	1.37	2.44	-2.72	-	-	-0.38	-	-	-	0.82	-
Sobic.002G191500.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G197900.1	-	3.88	-	-	-3.43	-3.16	-	-	-1.94	-2.15	-2.11	-1.54	-	-	-	-
Sobic.002G210401.1	-5.8	-2.65	0.18	1.09	1.39	1.46	1.65	-0.73	-	-	0.14	1.08	-	-	-2.09	-
Sobic.002G213200.1	-	-	1.15	-	2.28	1.12	0.84	1.07	-	-	-	1.51	-	-	-	-
Sobic.002G218400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G232300.1	-	-	1.83	3.64	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G264700.2	3.29	-1.5	-	-	-	-	-	-2.6	-	-	-	-	-	0.87	1.94	-
Sobic.002G268966.1	-	-	2.7	2.21	-0.37	1.53	-	-	-	-	0.26	-	-	-	-	-
Sobic.002G281000.1	-6.33	-6.34	-5.85	-6.62	-4.54	-4.51	-6.34	2.18	1.46	3.09	-6.08	-6.38	-	-8.95	-	-7.97
Sobic.002G394000.1	-2.27	2.56	-	-	0.28	3.12	-	-	-	-	-	-	-	-	-	-
Sobic.002G409250.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.003G065800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G073300.1	-3.1	-	-0.98	0.94	2.36	2.73	-1.65	-	-1.72	-2.66	-1.04	-1.15	-	-	-	-
Sobic.003G100500.2	-	-	-3.49	-2.57	2.05	3.22	-	-	-	-2.28	0.26	-0.93	-	-	-1.6	-
Sobic.003G109400.1	-	-	-	3.87	-	-	-	0.43	-	-	-	-	-	-	-	-
Sobic.003G137832.1	-	-	-	-	-	-	-0.43	-1.47	-	-	-	-	-	2.63	3.12	-
Sobic.003G154300.1	-	-	2.95	1.62	0.43	0.16	-3.27	0.36	-5.61	-4.45	-2.19	0.08	-	-	-	-
Sobic.003G198032.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.003G236200.2	-	-0.2	-	-	-	3.92	-	-	-	-	-	-	-	-	-	-
Sobic.003G318350.1	3.77	-	-	-	-	-	-	0.47	-	-	-0.06	-	-	-	-	-
Sobic.003G406180.1	-	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-	-
Sobic.004G022700.1	-	-	-	-	-0.37	-	-	-	-	-	2.96	2.9	-	-	-	-
Sobic.004G035750.1	-6.24	-4.44	0.23	1.0	2.35	1.68	-2.53	-0.63	-0.28	-0.23	0.39	-0.59	-	-	-	-
Sobic.004G046900.2	2.22	3.27	-	-1.79	-	-	-	-	-0.54	-0.48	-	-	-	-	-	-
Sobic.004G056500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G092700.1	-	-	-	-	-	2.63	-	-	-	3.3	-	-	-	-	-	-
Sobic.004G094000.1	-	-1.34	-	-1.96	0.71	-0.35	3.31	-3.07	-	-	-2.46	-	-1.21	-2.3	0.77	-1.33
Sobic.004G120500.1	-	2.75	1.05	-2.03	2.0	1.1	-0.79	-	-	-	-	-2.17	-	-	-	-
Sobic.004G137601.1	-	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-
Sobic.004G171600.1	1.23	2.47	-	-	-	3.02	-	-	-	-	-	-	-	-	-	-
Sobic.004G196200.1	-	-	1.47	-0.52	-	-	-1.52	-	-	-	-	-	1.06	-	3.03	0.94
Sobic.004G213500.1	-	3.81	-	-3.74	-	-2.29	-	-4.73	-0.03	-0.52	-	-	-	-	-	-
Sobic.004G289300.1	-1.93	2.74	-	-	-	-	-	0.89	-0.37	2.68	-	-	-	-	-	-
Sobic.005G017801.1	-	-	2.25	1.94	-3.68	-	-2.89	-1.49	1.28	1.2	-0.28	-0.02	-	-	-	-1.74
Sobic.005G041150.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G055501.1	-	3.88	-	-	-0.46	-	-	-4.26	-1.98	-	-	-	-	-1.77	-	-
Sobic.005G077750.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G082600.1	-5.51	-	1.1	1.02	1.61	2.64	-	-	-2.27	-1.32	-1.67	0.66	-	-	-	-
Sobic.005G167600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G192000.1	-	-	-	-	3.33	2.57	-	-	-	-	-	-	-	-	-	-
Sobic.005G225000.1	-	-	-	-	-	-	-	-	-	-	4.0	-	-	-	-	-
Sobic.006G011450.1	-	-	-	-	-	3.5	2.22	-	-	-	-	-	-	-	-	-
Sobic.006G027300.1	-	-	-	-4.18	-5.96	0.98	-	-2.79	2.93	2.6	-	-	-	-3.28	-	-
Sobic.006G054900.1	-4.4	-3.13	1.56	0.97	0.39	0.35	-1.57	-0.31	1.02	1.19	0.43	0.59	-	-	-4.41	-
Sobic.006G080100.1	-	2.56	-0.19	-1.03	-	-	-	-	1.96	-	1.82	-0.81	-	-	-0.47	-
Sobic.006G111500.1	-	1.93	-1.98	-2.64	-0.53	-4.0	-1.65	3.35	-	-	-	-	-	-	-1.09	-
Sobic.006G128266.1	-	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G174600.1	-	-0.63	1.97	1.86	1.65	1.77	-3.28	-1.51	-3.02	-2.97	-1.93	-1.77	-	-	-	-
Sobic.006G197100.1	-	-	1.5	1.17	1.93	1.53	1.33	-5.45	-	-	-0.52	-0.05	-	-	-	-
Sobic.006G246200.4	-	-5.96	-2.11	-1.6	2.28	1.09	2.15	-1.03	-0.6	0.31	-0.02	-0.67	-	-	-	-
Sobic.006G268500.1	-	-	1.9	2.75	1.8	0.5	-4.24	-	-	-	-2.27	-1.38	-	-	-	-
Sobic.007G027400.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G037400.2	4.0	-9.83	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G062700.1	-	-	-	0.95	2.34	3.17	-	-	-	-	-	-	-	-	-	-
Sobic.007G081800.1	-	3.99	-	-	-	-5.25	-	-	-3.64	-	-4.54	-	-	-	-	-
Sobic.007G149750.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G154901.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G168800.2	0.89	2.12	-	-	-	-	-	-	-	-	-	-	-	-	3.29	-
Sobic.007G170200.1	-	-	-	0.93	-	-	-	-1.05	1.16	-	-	-	3.51	-	-	-
Sobic.007G186500.1	-	-	0.43	1.4	0.74	-0.43	0.94	-7.12	-	-	2.5	1.02	-	-	-	-
Sobic.007G208700.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G002800.1	-6.27	-2.87	-5.45	-4.14	0.77	-3.14	3.74	-4.23	-	-	-1.76	-2.89	-	-	-	-3.69
Sobic.008G014000.1	-	-	-	-	1.48	-	-	-	-	-	-	3.72	-	-	-	-
Sobic.008G051600.2	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-	-
Sobic.008G090200.1	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G107200.1	-8.16	-5.1	-2.47	-0.96	-0.83	-2.83	0.22	-0.12	-1.45	-3.16	2.71	2.45	-	-	-	-
Sobic.008G140900.1	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G001700.1	-	3.26	-	-	-	-1.3	-	-2.09	1.18	1.55	-0.7	-	-	-	-	-
Sobic.009G068600.1	-	-	1.63	2.37	1.46	2.17	-2.59	-4.22	-3.78	-5.13	-4.68	-3.62	-	-	-4.46	-
Sobic.009G092601.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G110700.1	-	3.79	-	-	-0.87	0.29	-	-	-	-	-	-	-	-1.18	-	-
Sobic.009G219601.1	-	-	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-
Sobic.010G039700.1	-0.91	-0.39	0.55	1.32	0.94	1.22	1.87	-3.07	-	-	-0.64	-0.18	-2.79	-1.88	-0.49	-3.91
Sobic.010G041301.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.010G090600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.010G122533.1	-	-	-	-	-	-	-	4.0	-	-	-	-	-	-	-	-
Sobic.010G145300.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	4.0	-
Sobic.010G155300.1	-4.49	-4.26	0.21	1.42	0.74	1.97	-1.72	-1.42	1.27	1.27	-2.24	-0.58	-	-	-3.75	-4.84
Sobic.010G157100.1	-5.65	4.0	-	-	-	-	-	-9.4	-5.07	-	-	-	-	-	-	-
Sobic.010G198100.1	-1.38	-	1.12	0.62	1.52	2.51	-0.14	0.34	-1.43	-1.38	-1.34	-	-	-	-	-
Sobic.010G233500.1	-	-	-	0.6	-	-	-	-	-	-	1.94	0.83	-	-	3.15	-
Sobic.010G258400.1	-	-	-	-	-	3.17	-	2.81	-	-	-	-	-	-	-	-
Sobic.010G263151.1	0.37	3.88	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.