Heatmap: Cluster_627 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.28 -2.14 1.22 1.28 1.63 1.0 -0.74 -1.41 -0.23 -1.5 - -0.57 -0.23 -0.78 - -1.33
1.97 1.46 - - - - -0.17 -0.3 - - - - 1.83 -0.27 - 1.7
0.58 -0.39 - - - - - - - - - - 2.63 - 2.92 -
-0.27 0.97 -1.41 -0.07 1.04 0.88 - -1.27 0.18 0.24 - -0.83 0.5 0.99 - 0.37
1.66 1.83 -0.43 -1.26 0.43 0.9 - -4.26 - - - - 0.63 0.67 - 0.77

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.