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Heatmap: Cluster_201 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.28 -0.98 -0.59 -0.19 -0.31 -0.12 0.02 -0.1 0.26 0.45 0.87 0.5 0.05 -0.09 -0.88 0.17
-0.76 -1.59 0.36 0.94 0.62 0.28 0.23 -0.25 -0.25 -0.09 0.13 0.04 -0.21 -0.7 -1.02 0.3
-0.48 -0.76 -0.36 0.13 -0.12 0.15 -0.02 -0.39 0.31 0.58 1.07 0.67 -0.43 -0.82 -0.95 -0.35
-1.9 1.44 -1.13 -0.37 -0.76 -0.13 0.02 -0.39 -0.61 0.03 0.43 0.79 0.13 -0.19 -0.58 0.15
-0.43 -1.45 0.25 0.52 0.07 0.62 -0.07 -0.35 -0.65 -0.38 0.36 -0.07 0.37 -0.12 -0.31 0.35
-0.58 -1.32 -0.72 0.03 -1.07 -0.41 0.22 -0.22 0.3 0.86 0.76 -0.11 0.42 0.02 -0.74 0.53
0.12 0.17 -0.34 -0.42 -0.0 0.14 0.02 -0.63 0.43 0.16 0.31 0.8 -0.41 -0.41 -0.66 -0.14
-0.26 -0.67 0.25 0.56 0.62 0.5 -0.17 -0.61 -0.15 -0.49 0.83 0.81 -0.53 -0.98 -1.41 -0.61
0.59 -0.95 1.2 1.44 0.94 0.62 -0.4 -1.18 -1.06 -1.17 0.23 -0.7 -1.17 -1.51 -1.96 -0.91
0.5 -0.91 -0.67 -1.16 -0.9 -0.05 -0.46 -1.27 0.86 0.57 0.44 0.24 0.21 0.11 0.07 0.27
0.12 -1.61 -0.92 -1.63 -0.34 0.02 0.35 -0.32 -1.93 -1.55 0.58 0.31 0.86 0.57 0.21 1.05
-1.94 -3.32 1.26 1.66 1.02 1.28 -2.24 0.94 -0.71 -0.7 -0.27 -0.13 -3.04 -3.01 -3.25 -2.65
1.22 -0.69 -0.67 -1.07 -1.13 -1.29 0.55 0.21 -1.28 -1.18 0.14 -0.6 0.87 0.48 -0.36 0.89
-0.01 -0.47 -0.65 -1.11 0.09 -0.07 -0.27 -0.35 -0.87 -1.16 0.14 0.63 0.7 0.64 0.03 0.78
-1.54 -0.34 0.08 0.55 -0.01 0.79 0.47 -1.77 0.37 0.69 0.37 0.61 -0.6 -0.97 -1.7 -0.43
-0.26 -2.18 -0.7 -0.45 -0.78 -0.21 0.47 -1.09 -1.5 -1.43 1.45 0.89 0.46 0.2 -0.05 0.6
-1.56 -1.89 1.04 1.37 1.31 1.28 -0.27 -0.87 -1.5 -1.29 0.01 0.31 -1.15 -1.59 -1.93 -1.33
0.24 -0.67 -1.69 -1.53 -0.81 -0.66 0.29 -0.1 0.41 0.23 0.74 0.42 0.56 0.2 -0.25 0.25
-0.87 1.02 -0.52 -1.8 0.16 -0.44 -0.69 -0.93 -1.78 -1.84 -1.81 -1.19 1.05 1.23 0.22 1.36
0.48 -2.77 -2.64 -2.84 -1.87 -2.48 0.28 -0.56 -2.41 -1.3 0.55 0.26 1.21 0.89 0.65 1.49
0.24 -4.0 -2.07 -2.97 -2.18 -1.53 -0.82 -1.04 -10.16 -8.1 -1.8 -1.77 1.81 1.62 0.9 1.9
-1.76 -2.15 -0.54 -0.34 -0.63 -0.77 0.71 0.89 0.74 1.43 0.51 0.34 -0.62 -0.78 -1.51 -0.67
-0.2 -1.05 -0.79 -0.24 -0.47 -0.38 0.22 -0.13 0.06 0.09 0.72 0.25 0.55 -0.08 -0.48 0.67
-0.48 -1.12 0.04 0.68 -0.07 0.59 -0.25 -0.73 0.15 0.75 0.48 0.25 -0.2 -0.8 -1.09 -0.01
-0.28 -0.51 -0.24 -0.0 -0.07 0.14 0.44 0.38 0.21 0.15 0.36 -0.44 0.26 -0.32 -0.8 0.08
-0.4 -0.03 -1.59 -1.36 -1.07 -1.07 0.25 0.75 0.56 1.11 0.85 0.85 -0.61 -0.55 -1.2 -0.49
-0.18 -1.32 -0.07 0.41 0.45 0.29 0.12 -0.23 -0.26 0.32 0.58 -0.11 0.04 -0.48 -0.94 0.18
-0.09 -2.07 -1.37 -1.38 -0.55 -0.64 0.2 0.21 -2.08 -1.49 0.59 0.56 1.02 0.77 0.19 0.99
0.64 0.47 -2.16 -1.9 -1.72 -2.17 -0.19 0.32 -1.22 -0.32 -1.2 -1.49 1.17 0.75 0.11 1.53
-0.85 -2.79 0.55 -0.19 1.49 0.61 0.49 0.26 -3.16 -2.12 -0.08 0.7 -0.09 -0.6 -0.9 -0.04
0.66 -0.35 -2.18 -2.48 -1.41 -1.32 -0.26 -0.44 -0.57 -0.32 -0.16 -0.51 1.09 1.04 0.51 1.14
-0.12 0.02 -0.35 -0.17 -0.23 -0.36 0.31 -0.41 0.46 0.52 0.06 0.15 -0.07 -0.07 -0.27 0.08
0.04 -1.31 -0.18 0.4 0.05 0.77 -0.71 -1.09 -0.29 0.23 0.47 0.15 0.49 -0.11 -0.7 0.16
-1.8 -2.16 -3.92 -4.03 -4.04 -3.74 -3.79 1.17 2.18 2.93 -4.08 -3.92 -2.45 -2.81 -3.21 -2.41
-1.8 -2.72 0.59 1.02 1.0 0.58 -0.46 -1.44 -1.25 -0.82 0.62 1.0 0.1 -0.94 -0.83 -0.39
0.24 -0.55 -0.09 0.14 -0.13 -0.04 0.04 -0.19 0.13 0.47 0.59 0.25 -0.25 -0.3 -0.78 -0.17
0.76 0.4 0.28 0.31 0.02 -0.09 0.09 -0.72 -0.15 -0.49 -0.23 0.87 -0.59 -0.75 -0.74 -0.39
0.9 -0.81 -0.67 -0.62 0.01 0.37 -1.01 -0.79 -1.76 0.18 -0.2 -0.31 0.78 0.44 -0.26 0.92
0.34 -1.25 -1.12 -1.27 -0.89 -0.95 0.45 0.15 -0.84 0.1 0.43 -0.1 0.81 0.39 -0.21 1.05
-0.18 -1.64 -0.72 -0.56 0.01 0.23 0.46 -0.46 -0.19 -0.08 0.93 0.2 0.54 0.05 -0.66 0.3
-0.78 -1.52 -3.72 -3.47 -4.58 -3.92 -0.04 -0.59 -2.07 -3.45 -0.96 -2.21 1.92 1.61 0.82 1.81
-0.82 -0.56 -0.65 -0.74 -0.55 -0.0 -0.42 -0.35 -0.24 -0.01 0.44 0.97 0.55 0.14 -0.1 0.71
0.09 -0.9 -1.02 -0.42 -0.59 -0.61 0.36 -0.19 0.04 0.17 1.23 1.05 -0.09 -0.56 -0.79 -0.12
-2.06 -3.91 1.59 1.86 1.25 1.95 -1.86 -1.9 -1.88 -1.48 -0.67 -1.46 -2.58 -3.14 -2.71 -2.19
0.67 -0.32 -0.82 -0.47 -0.11 -0.12 0.04 -0.37 0.65 0.61 0.62 -0.07 -0.05 -0.62 -1.06 -0.03
0.5 -1.2 -1.08 -1.3 -0.32 0.23 -0.32 -1.62 -0.78 0.15 0.79 0.06 0.75 0.42 0.16 0.67
-0.41 -1.07 0.02 0.42 0.18 0.37 -0.67 -0.97 0.08 0.37 0.07 -0.16 0.54 0.06 -0.41 0.39
-0.15 0.3 -0.24 0.25 -0.09 -0.39 0.39 -0.33 0.2 0.23 0.34 0.44 -0.25 -0.39 -0.86 -0.11
0.1 -1.11 -2.23 -2.53 -2.08 -1.5 -0.96 0.63 1.33 1.46 -0.36 -0.98 0.49 0.23 -0.22 0.51
0.16 -0.51 0.75 1.06 0.93 -0.02 1.2 -0.99 -2.46 -1.98 -0.55 -1.06 -0.2 -0.25 -1.44 0.05
-1.15 0.81 -0.49 -0.17 0.14 0.16 0.35 -0.93 0.4 0.54 0.85 1.16 -1.42 -1.89 -2.5 -0.89
-0.34 -0.46 -0.95 -0.08 -0.5 -0.76 0.58 -0.12 -0.05 0.39 0.52 0.08 0.26 0.06 -0.19 0.52
-0.11 -1.12 -0.06 0.35 -0.05 -0.41 0.26 -0.3 0.29 0.37 0.36 0.32 0.01 -0.27 -0.46 0.07
0.61 -2.1 -0.27 0.04 -0.37 0.24 0.18 0.43 0.37 0.59 0.17 -0.23 -0.27 -0.49 -0.85 0.09
0.31 -0.55 -0.11 0.25 0.08 0.76 -0.2 -0.74 0.04 -0.21 0.49 0.54 -0.24 -0.44 -0.83 -0.24
-2.98 -2.22 1.61 1.87 1.81 0.97 -1.25 -1.74 -1.3 -1.54 -0.45 -0.5 -2.46 -2.76 -3.58 -2.72
0.87 -0.45 -1.98 -2.33 -0.62 -0.36 -0.51 -0.92 0.47 -0.19 -0.53 -0.38 0.84 0.59 0.08 1.17
-0.03 -0.83 -1.31 -1.35 -0.69 -0.47 0.08 -0.33 -0.81 -0.45 0.79 0.21 0.81 0.54 0.18 0.96
-1.14 -0.67 -0.28 -0.03 0.22 0.74 0.08 -0.24 0.5 0.17 0.87 0.99 -0.82 -1.07 -1.21 -0.88
-0.85 0.29 -1.39 -0.75 -0.19 -0.51 -0.11 -0.61 0.79 0.7 0.71 0.77 -0.15 -0.24 -0.59 -0.04
-0.36 -0.42 -1.28 -0.83 -0.78 -0.44 0.83 0.07 0.37 0.33 0.9 0.76 -0.26 -0.33 -1.01 0.15
-0.7 -0.09 -0.85 -0.6 1.18 0.09 -0.17 -0.51 0.11 -0.07 -0.23 0.62 0.28 0.01 -1.1 0.27
0.37 -2.06 -1.84 -1.99 -1.5 -1.12 -0.86 -0.25 -2.76 -3.05 -1.55 -1.47 1.53 1.26 0.91 1.85
0.29 0.06 -2.34 -2.02 -1.73 -1.15 0.49 0.09 0.51 0.19 0.4 0.03 0.48 0.36 -0.12 0.64
-0.07 0.22 0.08 0.31 0.45 0.23 0.3 -0.71 0.08 0.23 0.39 -0.09 -0.31 -0.68 -1.26 -0.19
0.59 -0.38 -0.56 -0.45 -0.05 0.37 -0.19 -1.01 -0.28 0.14 0.66 0.47 0.02 -0.07 -0.51 0.18
-0.35 -1.7 -0.69 -0.85 -0.43 -0.22 -0.07 -0.08 -1.38 -1.03 1.41 0.9 0.67 0.06 -0.37 0.49
-0.46 -1.83 -1.86 -1.86 -1.31 -0.61 0.01 0.76 -0.24 -0.15 -0.39 -1.4 1.3 1.16 -0.12 1.11
-0.19 -1.07 -0.23 0.17 -0.08 0.25 0.34 -0.17 -0.03 0.25 0.97 0.11 0.09 -0.49 -1.16 -0.1
0.3 -0.08 -0.73 -0.32 -0.5 -0.36 0.0 -0.5 0.36 0.32 -0.08 -0.22 0.47 0.21 -0.03 0.45
-0.21 -0.37 -1.55 -1.66 -1.23 -0.59 0.2 -0.36 -0.4 -0.17 0.01 0.11 1.05 0.79 0.52 0.78
1.97 -2.31 -1.7 -1.64 -1.18 -1.04 -0.61 -1.25 -0.86 0.63 0.23 -0.32 0.54 0.07 -0.14 0.81
-0.67 -1.47 -0.84 -0.25 -0.53 0.36 -0.63 -0.68 -0.36 -0.1 0.45 0.18 0.84 0.67 0.35 0.58
-1.36 -2.21 -0.4 0.06 -0.36 -0.87 0.63 0.82 0.41 0.86 1.2 0.9 -0.81 -1.3 -1.84 -1.32
-0.35 -3.27 -1.01 -1.14 -0.29 0.04 0.02 -0.73 -7.29 -4.54 -0.14 -0.2 1.33 1.24 0.55 1.34
0.0 -0.72 -0.23 0.22 -0.64 -0.62 -0.18 -0.51 0.36 0.32 0.09 0.23 0.54 0.23 -0.35 0.41
-1.31 -1.43 1.19 1.91 1.5 -0.61 -0.84 -0.71 -0.9 -0.2 -1.4 -1.16 -0.66 -0.69 -1.76 -0.41
-0.13 -1.24 -1.31 -1.06 -1.0 -0.49 0.73 0.08 0.04 0.76 0.94 0.33 0.3 -0.11 -0.77 0.28
-0.24 -1.0 -0.97 -0.52 -0.04 0.13 -0.13 0.58 -0.34 0.55 0.93 0.34 0.38 -0.37 -1.36 0.11
0.17 -0.15 -0.79 0.03 -0.88 0.13 0.02 -0.67 0.51 0.86 0.78 0.05 -0.19 -0.62 -1.0 0.09
-0.08 -1.03 -2.61 -1.52 -1.45 -0.99 0.45 -0.4 -0.04 0.59 0.79 0.26 0.87 0.05 -0.2 0.94
-1.86 -2.12 0.0 0.15 0.72 0.49 0.84 0.71 -2.08 -1.98 1.35 1.33 -1.27 -1.65 -2.46 -1.18
-0.29 -0.38 -0.53 -0.41 0.09 -0.64 -0.36 -0.79 0.63 -0.13 0.1 0.23 0.63 0.29 -0.07 0.56
-1.89 -3.86 -0.73 -0.37 -1.03 -0.32 0.49 -0.02 -0.07 0.41 0.89 0.28 0.78 0.28 -0.38 0.63
0.3 -0.87 -0.04 0.75 0.42 1.09 -0.08 -0.45 -0.46 -0.07 0.31 -0.36 -0.1 -0.86 -1.7 -0.12
0.4 1.34 -1.7 -1.66 -0.97 -0.68 0.71 -1.04 -1.06 -1.85 -0.07 0.19 0.66 0.42 -0.34 0.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.