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Heatmap: Cluster_262 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - - - - - - - - - 3.79 1.11 - -
- - - - - - - - - - - - 4.0 - - -
-2.58 - -0.01 -0.6 -0.96 0.03 0.85 -1.7 - - - -0.59 3.0 0.9 - -
- - - - - - - - - - - - 4.0 - - -
- - - - - - - - - - - - 4.0 - - -
-3.38 -8.06 -4.59 -6.38 -4.46 -4.67 -3.37 3.77 -2.84 -2.58 -8.48 -7.0 0.13 -0.95 -3.93 -9.67
0.78 - 3.28 - 1.18 - - - - - - - 1.23 - - -
- - - - - - - - - - - - 4.0 - - -
- - - - - - 2.01 - - - - - 3.58 - - -
- - - - - - - - - - - - 3.79 1.11 - -
0.33 - - - - - - - - - - - 3.88 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.