Heatmap: Cluster_266 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	stage A1 (Dhaka et al., 2020)	stage A3 (Dhaka et al., 2020)	M-81E strain-control (Sun et al., 2020)	M-81E strain-salt (Sun et al., 2020)	Roma strain-control (Sun et al., 2020)	Roma strain-salt (Sun et al., 2020)	root (Murray et al., 2022)	shoot system (Murray et al., 2022)	119 days old-Postflowering drought stress (Varoquaux et al., 2019)	84 days old-control (Varoquaux et al., 2019)	84 days old-Preflowering drought stress (Varoquaux et al., 2019)	35 days old-control (Varoquaux et al., 2019)	Dev Stage 3 (Leiboff et al., 2019)	Dev Stage 2 (Leiboff et al., 2019)	Dev Stage 1 (Leiboff et al., 2019)	Dev Stage 4 (Leiboff et al., 2019)
Sobic.001G112300.1	0.34	3.88	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G184500.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G234000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.001G357600.1	-	-	-	-	-	2.36	-	-	3.0	-	1.51	-	-	-	-	-
Sobic.001G430600.1	-1.8	-	-1.0	-	3.54	1.2	-	-	-	-	-0.92	-0.44	-	-	-	-
Sobic.002G010600.1	-	-1.53	-2.06	-	-	-3.64	-3.35	-2.23	-3.02	-0.38	2.76	2.88	-	-	-	-
Sobic.002G021500.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G211200.1	-	-	-	-	-	-	1.46	-	3.73	-	-	-	-	-	-	-
Sobic.002G237100.1	-	3.94	-	-	-4.0	-0.78	-	-	-	-	-	-	-	-	-	-
Sobic.002G332000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.002G360100.1	0.52	-	1.21	-	0.53	-1.62	-	-	-	-	-	3.39	-	-	-	-
Sobic.003G015200.1	-	-	-1.51	-1.1	-4.34	-1.83	3.75	-2.55	-	-	-1.92	0.01	-	-	-	-
Sobic.003G183850.1	-	-	0.66	2.58	1.37	1.95	-1.01	-2.0	-	-	0.33	-	-	-	-	-
Sobic.003G238900.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G040800.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G117700.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G184700.1	-	-	-	-	-	-	-	-	-	4.0	-	-	-	-	-	-
Sobic.005G203150.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.005G203700.2	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G006000.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.006G194900.1	-	-	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G124600.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G162901.1	2.09	3.21	1.3	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G166500.1	-	4.0	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.007G218550.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.008G144201.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G024166.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G096433.1	-1.86	2.56	1.34	2.83	-2.53	-	-	-	-	-	-	-	-	-	-	-
Sobic.009G099050.1	-	-	-	1.46	3.17	2.1	-	-	-	-	-	-	-	-	-	-
Sobic.010G182900.1	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.