1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_228 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.13 -0.96 1.36 1.59 1.65 1.39 -1.28 -2.37 -2.34 -2.51 -0.85 -0.43 -1.5 -1.58 -1.47 -1.4
0.6 -1.84 -0.93 -1.13 -0.77 -0.1 0.72 -0.49 -0.38 -0.07 0.63 -0.42 0.5 0.48 0.32 0.35
-4.72 -6.88 1.08 1.24 1.08 1.58 2.13 -3.06 -3.24 -4.59 -1.09 0.12 -4.15 -4.48 -4.64 -4.83
1.17 -0.6 -0.96 -0.89 -0.96 -0.19 0.25 -0.56 0.12 0.84 0.84 0.7 -0.93 -0.68 -0.69 -0.51
-0.32 -0.35 -5.23 -5.12 -5.74 -4.12 -3.64 1.23 2.03 2.05 0.04 -0.8 -1.24 -0.9 -0.98 -0.89
0.75 -0.27 -0.82 -1.63 -0.57 -0.54 0.47 -0.61 -0.62 -0.18 0.22 -0.6 0.54 0.6 0.59 0.44
-2.04 -4.46 -1.62 -1.95 -0.73 -2.29 -0.13 1.38 1.59 1.94 0.38 0.18 -1.28 -1.27 -1.31 -1.74
-2.8 -7.6 0.9 0.24 0.85 2.75 -2.92 -4.01 -7.79 -5.34 0.49 0.36 -1.85 -1.35 -1.35 -1.77
-2.77 -1.4 1.66 1.77 0.78 0.14 1.63 -1.76 -3.24 -4.07 -0.94 -0.83 -1.67 -1.84 -0.96 -1.66
-0.52 -0.07 -1.23 -0.05 0.05 0.8 -0.04 0.26 1.15 -0.17 -1.81 -2.79 -0.44 1.15 -0.46 -0.34
1.15 0.27 -0.62 -1.09 -0.36 -0.17 0.29 -0.55 -0.58 -0.16 0.13 0.16 -0.08 -0.01 0.16 0.06
1.44 -0.17 -1.2 -0.6 -0.84 -0.78 0.25 -0.27 0.42 0.2 0.7 0.27 -0.57 -0.44 -0.52 -0.49
-1.71 -0.13 -0.41 -0.71 -0.36 -0.08 0.43 0.77 -0.12 0.58 0.61 1.26 -1.23 -0.72 -0.36 -1.07
1.1 0.4 -2.19 -2.4 -1.24 -2.11 -0.71 -1.25 -7.26 - -4.84 -3.36 1.56 1.46 0.43 1.71
-1.08 -1.79 0.1 -0.08 0.45 0.62 0.69 -0.6 -1.3 -2.12 0.17 0.08 0.57 0.44 0.25 0.25
2.67 -5.41 -1.3 -1.95 -0.6 -0.76 -0.34 -0.38 -2.86 -2.36 -0.02 -1.77 -0.36 0.26 0.61 0.02
-3.71 0.59 0.16 0.89 -0.81 1.32 -1.39 -2.05 0.66 0.79 1.7 0.05 -4.43 -4.53 -5.11 -4.27
0.9 -0.64 -1.05 -1.18 -1.09 -0.5 0.33 -0.81 0.42 0.58 0.79 -0.06 -0.12 -0.08 0.13 0.11
0.49 -2.29 -0.16 -0.04 0.51 0.35 0.74 -0.5 -0.83 -0.93 0.79 0.88 -0.61 -0.35 -0.64 -0.51
-3.15 -4.47 -4.51 -3.22 -4.56 -3.89 -2.23 1.85 -0.24 3.1 -0.93 -1.23 -1.57 -1.34 -2.27 -1.2
0.79 0.87 -0.56 -1.78 -0.33 -0.25 0.49 -0.71 -1.76 -1.88 -0.24 0.33 0.46 0.6 0.16 0.18
-0.53 -1.88 -0.16 -0.6 -0.07 0.47 0.31 -0.93 -1.56 -0.75 0.08 -0.41 0.72 0.78 0.65 0.76
-2.22 -1.36 0.97 1.14 1.73 1.68 1.39 -0.94 -2.38 -2.87 -2.43 -0.4 -4.1 -3.97 -2.9 -4.48
-3.18 1.0 -0.33 0.19 -0.29 1.91 1.66 -1.87 -2.15 -1.96 0.57 0.09 -1.85 -2.15 -2.62 -2.05
1.43 0.81 -0.13 -0.05 -0.15 -0.36 -0.17 -1.33 -0.76 -0.58 0.31 0.27 -0.45 -0.35 -0.46 -0.41
-1.75 -7.27 0.32 0.39 0.58 -0.18 -1.2 -0.34 -6.78 - -1.52 -1.81 1.3 0.98 1.26 1.04
1.21 -2.32 -0.75 -1.84 -0.7 -0.59 -1.48 -0.37 -3.52 -4.32 -3.05 -1.85 1.17 1.3 1.49 1.1
1.27 0.11 -1.05 -0.95 -1.16 -0.91 -0.07 -0.76 -0.37 -0.62 -0.42 -0.5 0.52 0.75 0.73 0.41
-3.88 -7.94 -0.73 -1.08 -0.77 0.36 -0.59 -0.38 -8.01 - -2.35 -1.35 1.19 1.75 2.02 0.35
0.53 -1.06 -1.74 -2.2 -1.91 -1.09 0.63 -0.72 -0.59 0.07 0.71 -0.09 0.82 0.82 0.61 0.4
-2.08 -3.54 -0.47 -0.49 -0.45 0.06 1.05 1.65 1.17 1.58 -0.2 -1.08 -2.28 -2.33 -3.17 -2.63
-0.21 0.11 -1.12 -1.21 -0.66 -0.5 0.61 -0.71 -1.02 -0.91 0.49 0.27 0.67 0.47 0.55 0.68
- - 0.19 2.89 -3.09 -2.26 -1.39 1.75 - -2.6 -4.15 -4.25 -0.31 0.01 0.4 -
0.5 0.69 -0.99 -1.34 -0.56 -0.51 0.16 -0.64 0.4 0.27 0.62 0.48 -0.32 -0.34 -0.07 -0.08
1.56 -0.51 -3.34 -2.42 -2.08 -2.53 -3.64 -1.96 -0.06 -1.02 -0.4 0.28 0.38 1.12 1.65 0.37
0.06 0.58 -0.12 -0.46 0.01 0.47 -0.84 -1.48 -1.1 -0.76 -0.51 0.37 0.31 0.78 0.56 0.04
0.46 0.41 -2.17 - -0.46 -1.61 -0.14 -2.15 -0.24 -2.51 -1.47 -1.57 1.06 1.22 1.29 1.2
-2.3 -4.8 -0.34 -1.23 -0.14 0.67 -1.12 -0.51 -7.3 -7.24 -2.43 -1.34 1.14 1.64 1.77 0.66
0.12 0.43 -0.08 0.01 -0.07 -0.41 0.83 -0.76 -0.57 -0.94 -0.06 0.4 0.13 -0.16 -0.31 0.33
-1.38 -1.29 -4.83 -3.46 -3.55 -3.82 -2.94 0.44 2.38 2.49 -1.46 -2.34 -1.15 -0.81 -1.38 -0.6
-1.13 -2.8 -3.23 -2.83 -2.28 -1.77 -0.7 1.69 0.66 0.97 -0.87 -1.39 0.63 0.92 0.59 0.49
-0.16 -0.29 -0.58 0.02 -1.15 -1.43 0.21 -0.16 1.02 0.77 0.44 0.62 -0.33 -0.41 -0.47 -0.26
-1.46 -2.01 0.76 0.98 0.89 0.63 1.82 -1.86 -3.13 -4.5 -0.29 0.38 -1.24 -0.8 -0.58 -0.79
-4.98 -3.97 -3.44 -5.57 -2.82 -4.84 -4.99 -2.66 -3.53 -4.47 -5.66 -4.02 1.62 2.03 2.45 1.38
-1.22 -0.35 -3.16 -3.76 -2.71 -3.03 -3.89 -4.91 -5.7 -6.66 -6.58 -3.53 1.75 1.88 2.21 1.27
0.13 -0.93 -0.87 -0.89 -0.75 0.03 0.83 -0.73 -0.42 -0.24 0.76 1.14 -0.32 0.05 0.05 -0.1
1.29 -0.31 - - -4.74 -2.1 -2.08 -3.93 -0.4 -1.44 -4.21 - 1.29 0.9 1.34 2.05
-0.11 0.04 -0.7 -0.79 -0.18 -0.53 -0.46 -0.07 0.47 0.6 0.31 -0.38 0.25 0.23 0.06 0.35
0.48 -2.16 1.23 1.63 0.55 0.45 -0.45 -1.53 -2.72 -3.44 1.19 1.26 -5.11 -5.35 -5.33 -5.0
0.88 -0.12 -1.77 -1.71 -0.97 -0.94 0.08 -0.66 -0.96 -0.1 -0.02 0.03 0.72 0.65 0.54 0.84
-0.03 -0.9 -1.1 -1.93 -0.52 -0.4 1.46 0.32 -1.28 -0.48 0.63 0.82 -0.27 0.11 0.05 -0.13
-0.62 -4.03 -1.46 -0.48 -0.26 0.22 -2.68 -1.74 - -10.07 -4.65 -2.96 1.46 1.79 1.63 1.19
0.38 -1.7 -0.85 -1.06 -0.41 0.17 0.27 -0.55 -0.29 -0.18 0.68 -0.54 0.56 0.66 0.4 0.3
-0.79 0.62 -1.89 -1.66 -1.86 -0.87 -0.07 -0.16 1.5 1.39 0.56 0.65 -1.28 -0.67 -0.81 -0.96
0.57 -1.13 -1.37 -1.44 -1.07 -0.54 0.29 -0.58 0.1 0.46 0.71 -0.03 0.36 0.45 0.23 0.46
-0.26 -1.86 -8.15 - -4.11 -7.18 -5.82 2.21 1.51 -0.1 -6.48 -5.59 0.94 0.98 -0.17 0.66
-1.88 -2.27 -0.2 0.13 0.29 0.95 1.35 -1.24 -3.44 -2.77 0.88 0.18 0.11 0.45 -0.31 -0.06
1.08 -1.49 -1.24 -0.95 -1.34 -0.68 0.44 -0.33 -1.14 -0.58 0.33 0.31 0.56 0.61 0.27 0.66
-0.64 0.44 0.96 0.79 1.01 1.25 0.1 -1.45 -3.96 -5.81 -0.23 0.56 -0.93 -0.43 -0.93 -1.69
0.21 -0.74 -0.1 0.31 0.01 -0.01 -0.15 0.02 1.73 1.23 -0.32 -0.47 -2.15 -2.25 -1.86 -1.94
-0.92 -1.6 -0.05 -0.0 0.02 -0.65 -0.12 -0.23 -0.39 -0.66 -0.49 -0.71 0.99 0.88 0.52 0.81
-4.08 -4.96 0.02 -2.98 -2.78 -2.11 -4.61 -4.89 - -7.76 -6.73 -5.25 1.7 1.73 2.71 0.25
0.51 -0.07 -0.39 -0.35 0.12 -0.08 0.46 -0.3 -0.27 -0.54 0.68 0.73 -0.39 -0.39 -0.33 -0.41
0.2 -2.27 1.23 1.32 -0.94 0.8 -0.67 0.61 0.13 0.7 0.26 -0.66 -2.15 -2.38 -2.3 -2.3
0.56 -0.82 -1.34 -1.8 -1.08 -0.92 0.75 -0.09 0.0 -0.12 0.56 0.58 0.45 0.18 0.06 0.29
0.22 0.68 -0.33 -0.2 0.19 0.05 0.38 -0.31 0.2 -0.18 -0.35 0.21 -0.08 -0.24 -0.35 -0.47
-4.38 -4.4 0.92 1.13 1.13 0.94 0.4 -0.15 -0.02 -0.59 0.85 0.79 -3.88 -3.5 -3.37 -4.0
-0.07 0.95 -1.46 -1.81 -0.63 -0.55 0.53 0.49 0.11 0.1 -0.08 -0.08 0.12 0.2 0.27 -0.3
0.21 0.37 -0.32 -0.73 -0.48 -0.07 0.24 -0.39 0.01 -0.05 -0.25 -0.22 0.19 0.24 0.46 0.22
0.56 -3.04 1.47 1.52 0.52 0.58 0.06 -1.18 -1.41 -2.35 0.55 0.12 -2.05 -1.72 -1.27 -1.89
-1.47 -1.43 -0.2 -0.35 0.65 1.5 1.13 -0.59 -1.13 -1.4 1.08 1.07 -1.83 -1.37 -1.56 -1.72
0.39 -1.13 -1.16 -1.61 -1.03 -0.26 0.69 -0.96 -0.28 0.11 0.58 -0.11 0.27 0.45 0.75 0.5
-1.38 -1.37 0.33 0.87 -0.05 0.14 0.51 -0.09 -0.05 0.13 1.09 0.56 -1.0 -0.93 -1.02 -0.93
-1.77 -3.79 -0.86 -0.98 2.19 2.3 0.23 0.38 -3.06 -1.96 -1.89 -1.51 -1.26 -0.93 -1.43 -1.7
0.45 -0.56 -1.12 -0.42 0.99 0.36 0.8 -0.67 0.32 0.31 0.03 0.52 -0.99 -0.87 -0.6 -1.11
0.27 -0.19 0.3 -0.68 -0.01 0.16 0.47 -1.07 -3.08 -1.83 -0.08 0.14 0.58 0.61 0.4 0.38
0.57 -0.46 -0.89 -1.81 -1.57 -1.12 -0.45 -1.38 -1.15 -0.97 0.18 1.3 0.74 0.7 0.68 0.67
0.33 -0.82 -1.46 -1.45 -0.87 -0.51 0.2 -1.01 -0.08 0.86 -0.27 -0.89 0.63 0.94 0.75 0.36
0.76 -0.27 -4.9 -3.89 -4.07 -2.27 -2.66 0.04 0.63 1.11 0.24 -1.25 0.92 0.88 0.28 0.74
-2.64 -3.92 -1.89 -3.01 -1.09 -1.85 -1.11 -0.39 - - - -1.97 1.35 2.02 2.16 1.06
0.71 -1.07 -1.6 -2.09 -1.34 -0.78 0.33 -0.83 -1.15 -0.25 0.66 -0.39 0.86 0.85 0.72 0.7
0.35 0.88 -3.57 -3.05 -0.62 -0.97 0.02 -0.41 1.13 1.51 1.22 0.73 -2.35 -1.94 -2.89 -2.9
-1.84 0.67 -0.99 -0.78 -0.07 -0.68 1.18 0.12 0.43 0.61 0.47 0.46 -0.88 -0.24 -1.09 -0.71
-3.1 -4.41 2.03 2.28 1.04 1.29 -2.35 -4.74 -5.99 -4.5 -0.41 -0.16 -3.2 -3.18 -3.05 -3.17
2.28 3.15 -6.71 - - - - - - - - - -0.84 -0.38 -0.18 -5.92
1.01 0.16 -1.62 -1.97 -1.3 -1.08 0.53 0.09 1.2 0.61 0.52 0.52 -0.91 -0.93 -0.84 -0.79
0.58 0.12 -1.08 -1.46 -0.41 -0.29 -0.09 -0.37 -0.03 -0.02 0.98 0.54 0.16 0.08 -0.45 -0.04
0.68 -0.89 -0.93 -1.0 -0.48 -0.07 0.28 -0.83 -0.38 -0.48 -0.23 -0.62 0.67 0.73 0.87 0.4
-0.12 -0.24 -1.52 -1.73 -1.02 -0.73 -0.26 -0.67 1.07 0.72 0.35 0.18 0.19 0.19 0.58 0.12
-1.75 -3.17 0.53 0.52 0.46 0.41 0.47 0.77 0.78 0.84 0.63 0.2 -2.35 -2.52 -3.13 -2.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.