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Heatmap: Cluster_30 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.0 0.0 0.0 0.0 0.16 0.29 0.73 0.0 0.0 0.0 0.49 0.68 0.0 0.0 0.0 0.0
2.01 0.06 37.1 13.03 25.3 9.13 8.4 5.61 0.27 3.48 16.29 10.93 2.05 2.0 0.67 5.97
17.31 6.62 136.97 103.03 117.53 167.93 19.94 19.79 2.59 4.2 27.44 49.11 69.73 57.66 98.41 40.28
0.19 0.53 1.4 2.57 9.15 16.43 0.0 0.0 0.0 0.0 0.33 0.0 34.62 31.02 99.9 10.14
0.0 0.0 0.11 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.09 0.0 9.22 5.46 4.79 5.71 0.48 0.22 0.51 0.94 0.69 0.26 0.0 0.3 0.0 0.0
1.73 4.07 5.94 1.73 9.92 11.41 0.89 0.25 0.49 0.29 0.3 1.4 1.44 1.57 28.59 3.61
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0
2.48 5.88 23.42 21.43 11.98 28.75 5.23 1.25 1.4 1.65 9.3 8.3 2.01 3.14 1.48 2.92
0.69 9.7 4.62 2.82 4.83 3.03 0.48 18.52 24.81 29.99 0.28 0.52 7.69 20.68 17.63 7.06
23.55 0.52 44.64 60.87 38.51 112.73 8.49 2.05 0.0 0.08 12.71 14.74 3.87 11.19 17.7 5.42
0.03 0.0 0.0 0.0 0.0 0.04 0.0 5.38 1.01 0.77 0.07 0.2 0.34 0.63 0.0 0.31
2.07 0.23 28.32 35.82 70.73 94.55 0.95 0.64 0.02 0.16 2.12 3.46 14.85 18.26 48.59 23.34
0.13 1.35 0.23 0.48 0.42 1.05 0.1 0.01 0.4 0.48 0.37 0.57 158.0 127.69 139.28 169.08
0.25 0.74 1.15 0.34 2.18 1.08 0.75 0.7 0.07 0.0 0.0 0.07 4.16 4.52 3.6 3.67
3.11 82.17 35.75 4.43 8.32 41.5 0.46 0.83 0.0 0.0 0.0 0.59 3.14 3.68 9.27 0.0
0.05 0.27 0.59 1.07 0.55 0.5 0.0 0.01 0.13 0.4 0.28 0.26 56.44 103.85 87.88 57.92
3.55 0.95 128.83 132.45 132.41 167.88 34.3 17.1 18.49 37.29 82.04 68.88 4.59 9.61 19.3 26.46
9.25 11.15 152.61 220.61 142.94 234.52 34.57 15.52 147.27 258.17 110.23 87.83 2.23 2.38 3.13 2.05
0.79 0.76 20.95 11.52 33.86 177.56 0.87 0.98 0.13 0.41 65.62 75.71 3.24 1.67 97.34 13.67
0.55 0.76 32.4 19.4 76.98 124.3 2.99 25.57 1.11 0.85 34.96 40.03 3.66 0.92 62.73 13.18
0.33 3.21 0.63 0.61 0.32 3.09 0.79 1.6 0.29 0.15 0.08 0.0 8.4 18.36 15.43 5.53
16.04 37.74 238.25 253.94 233.75 111.96 43.73 19.94 19.79 19.13 25.23 30.45 54.44 91.4 73.01 85.14
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.02 0.72 0.0 0.25 0.18 0.16 0.21 0.16 0.0 0.0 0.05 0.19 49.87 123.75 86.57 88.03
1.11 1.07 211.6 309.11 158.4 220.61 41.32 22.62 7.43 16.65 153.22 126.47 3.27 3.48 9.54 5.59
5.95 0.84 155.4 107.72 137.03 215.09 129.92 5.17 5.64 8.29 58.46 45.91 1.32 1.9 3.59 1.12
9.28 2.48 197.7 165.56 105.14 220.76 11.99 16.48 5.56 24.13 143.97 123.87 6.37 11.77 20.03 17.25
0.29 0.0 3.0 2.95 2.35 1.16 8.62 0.25 0.0 0.0 0.58 2.16 0.0 1.3 0.0 0.0
0.04 0.36 23.55 26.04 37.93 49.89 7.0 0.31 3.32 5.9 16.91 16.98 0.79 1.12 5.21 0.0
33.41 15.65 92.1 99.52 90.36 216.63 14.83 10.5 14.86 47.94 147.59 142.94 4.73 16.61 11.82 9.47
11.02 3.22 29.15 33.55 32.88 21.5 2.6 1.31 1.9 4.84 2.03 1.94 3.74 11.12 11.29 12.01
0.45 0.08 2.33 1.5 3.15 9.39 0.36 0.82 0.27 0.34 2.78 4.72 2.15 2.64 4.68 2.27
40.94 61.41 434.38 377.83 307.96 394.42 60.64 38.28 97.6 102.25 244.29 239.24 282.69 216.06 366.84 355.18
8.8 1.31 5.72 3.71 7.38 15.44 3.77 9.8 1.31 2.18 8.74 16.01 58.31 71.19 59.25 82.24
2.42 17.19 14.78 17.74 12.48 7.53 12.82 18.74 22.61 37.22 24.1 15.5 7.65 6.74 15.04 7.54
0.17 0.37 0.2 0.08 1.4 2.96 0.93 1.29 0.4 0.16 0.8 1.24 7.48 19.87 23.92 15.71
0.61 0.75 26.03 32.55 25.38 53.5 5.35 0.2 0.9 3.99 29.14 43.34 0.82 1.33 11.62 1.5
8.95 6.46 202.09 282.42 227.53 406.99 23.47 5.09 6.88 13.86 140.95 145.44 5.18 6.04 12.49 11.42
2.66 0.0 1.66 1.4 3.96 3.89 0.99 0.16 0.0 0.0 0.64 0.24 5.04 9.16 15.15 10.34
0.27 0.2 53.81 63.66 37.84 200.96 1.0 1.14 1.03 7.78 49.99 48.26 0.49 1.06 8.29 2.08
0.84 0.0 6.24 3.26 28.21 5.7 28.75 0.21 0.0 0.0 0.47 0.0 0.0 0.0 0.0 0.0
1.99 0.0 4.87 4.86 3.1 6.27 7.38 6.23 0.06 0.06 7.5 6.61 6.1 13.07 11.1 3.5
2.26 5.51 59.58 43.63 98.88 58.32 3.48 3.91 0.95 3.54 10.8 11.25 1.71 2.56 12.08 1.57
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 7.89 0.0 0.0
0.0 1.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.22 0.0 0.66 0.42 0.27 0.0 0.0 0.05 0.0 0.26 0.0 0.12 0.0 0.0 0.0 0.0
0.24 0.0 6.23 8.79 7.22 13.67 1.35 0.62 0.17 0.54 2.05 2.94 24.92 36.36 97.95 17.44
0.56 0.46 8.02 9.84 9.23 85.91 0.56 1.8 0.44 4.62 52.45 67.16 0.44 5.18 31.77 3.45
1.67 2.72 30.68 22.21 13.21 24.4 4.07 8.18 16.32 19.81 17.32 13.28 21.27 23.75 28.11 24.78
14.81 7.75 119.88 226.84 156.89 640.27 4.16 13.47 0.0 0.86 10.49 19.63 1.34 2.15 30.64 1.5
19.65 42.24 629.09 550.81 515.91 716.2 52.87 22.68 119.47 107.71 250.47 274.64 120.73 148.17 311.03 181.91
14.31 25.94 56.67 47.13 72.42 84.33 20.12 8.19 25.04 40.27 87.86 85.96 60.97 68.99 63.66 114.75
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 58.59 87.38 22.14 45.64 0.93 0.64 0.36 0.15 14.02 5.6 0.0 0.17 0.0 0.0
0.0 3.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
3.2 3.65 90.96 86.04 96.19 142.12 8.36 1.7 2.54 5.36 11.15 12.88 28.38 50.44 157.39 76.51
18.48 20.98 302.5 329.27 403.9 461.47 25.69 8.7 48.01 71.61 76.8 79.25 59.51 90.62 301.57 111.0
3.49 4.04 73.05 76.37 105.72 139.13 4.91 1.88 30.19 51.35 22.5 29.89 26.23 44.22 111.8 35.5
7.8 6.87 58.13 69.54 60.8 61.06 8.84 3.25 0.0 0.0 0.0 0.0 14.51 21.92 51.71 19.0
2.1 2.99 439.68 564.54 252.32 753.18 20.9 2.42 40.08 82.85 219.1 245.43 9.33 46.41 76.83 27.49
3.83 3.72 24.71 29.58 28.84 34.96 0.8 1.6 1.71 0.63 3.91 3.02 10.81 26.98 21.84 9.37
4.55 0.13 105.5 140.51 88.6 195.11 36.49 5.14 24.35 35.89 107.9 65.96 0.96 1.57 3.3 0.95
7.15 27.12 86.25 70.64 124.28 177.26 21.87 11.56 0.33 1.7 49.12 46.42 2.45 6.77 3.2 1.87
1.21 2.73 2.14 3.77 4.37 4.24 0.95 0.24 0.04 0.09 0.44 1.46 2.9 4.36 18.73 0.95
35.0 83.57 230.06 226.25 198.02 315.67 30.92 15.08 48.41 40.67 122.88 125.91 60.11 71.24 156.09 59.92
1.85 4.08 152.61 118.95 152.46 254.38 2.65 2.85 2.31 6.86 32.09 33.33 5.29 3.59 13.07 6.89
73.45 182.91 150.54 88.17 180.83 293.08 85.71 43.35 303.91 549.1 752.94 576.96 63.17 72.76 218.49 74.71
0.02 2.78 12.71 19.83 8.92 5.84 2.18 0.11 0.35 0.05 0.85 1.23 1.13 0.76 0.25 0.92
0.15 0.0 0.21 0.53 1.13 1.23 1.18 0.0 0.0 0.0 0.0 0.0 0.26 0.0 0.0 0.0
0.0 4.55 0.0 0.0 0.0 0.18 0.0 0.01 0.0 0.0 0.0 0.0 0.7 3.93 4.13 0.64
5.81 21.14 280.39 297.58 194.84 161.46 32.53 23.2 173.41 367.78 415.73 404.93 24.59 37.69 65.36 53.3
0.39 5.66 1.67 1.78 0.84 8.34 0.73 0.25 10.32 0.67 1.09 0.19 0.65 3.02 2.85 0.74
17.25 8.25 125.71 131.91 92.24 149.0 25.29 43.0 17.23 20.3 70.67 41.62 5.17 12.09 12.19 18.5
2.22 17.16 1.16 0.57 0.28 0.15 8.73 10.23 26.79 14.7 0.81 0.6 0.95 1.42 0.75 0.35
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.35 0.14 3.86 4.44 14.45 17.06 10.09 2.66 0.53 0.0 9.87 4.85 5.26 6.77 17.59 7.97
27.61 33.38 431.25 308.44 303.3 299.54 30.45 39.05 11.94 27.51 69.41 84.01 21.31 28.29 48.69 27.69
0.5 0.2 53.46 82.35 64.29 71.75 17.22 4.42 8.57 16.59 40.98 21.81 0.71 1.26 2.78 1.82

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)