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Heatmap: Cluster_208 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
2.0 1.32 0.05 0.09 0.65 0.49 1.6 1.41 0.96 0.93 1.56 1.2 6.7 8.48 6.77 7.48
15.23 15.09 1.85 3.11 3.86 5.64 18.15 9.9 5.31 3.39 13.99 11.34 17.93 19.34 19.1 26.0
43.24 33.17 20.03 29.03 27.24 28.4 59.67 35.63 48.51 39.82 44.1 30.87 53.1 52.69 44.84 71.48
4.4 11.72 1.5 1.49 2.13 3.95 10.97 12.45 22.73 22.06 11.55 6.42 17.54 12.92 8.23 16.34
380.21 427.93 80.49 92.76 97.9 122.19 235.63 180.56 380.36 326.41 305.45 258.73 100.39 107.08 109.01 119.21
36.6 14.33 3.49 3.05 4.23 8.13 17.33 10.29 9.89 10.54 17.76 17.85 24.85 27.26 17.26 22.29
71.31 49.01 37.69 39.49 51.71 51.3 97.82 60.28 58.54 39.54 66.35 88.32 50.82 36.89 46.98 45.14
1.32 0.78 39.66 33.84 65.48 36.31 8.14 3.87 0.97 0.98 5.36 6.74 4.05 4.46 1.77 2.68
10.17 5.78 10.22 15.93 20.87 18.49 22.55 7.54 19.26 28.56 37.68 32.03 5.73 3.89 2.47 4.83
18.7 12.83 5.13 3.32 8.1 6.99 5.38 4.9 6.09 7.24 5.05 2.97 13.93 11.46 10.86 12.12
5.68 8.38 0.1 0.0 0.0 0.3 0.16 81.8 85.4 68.24 0.08 0.15 18.75 14.71 4.84 13.38
14.22 22.13 5.41 4.4 7.05 7.82 14.84 15.44 73.18 64.77 9.78 9.09 9.38 8.78 8.0 15.43
61.76 88.34 75.85 81.39 73.65 60.02 73.75 193.45 170.03 99.35 52.8 89.9 64.7 59.23 112.21 96.07
1.2 0.14 1.93 1.19 3.58 2.5 14.57 4.31 0.4 0.21 3.25 3.86 21.41 18.84 8.04 19.65
39.92 32.29 45.15 56.15 63.07 93.82 82.87 60.54 58.76 66.31 179.35 188.37 57.11 58.33 50.91 66.45
4.62 1.97 1.1 1.37 0.78 1.66 3.58 5.29 5.38 2.68 1.36 0.77 7.22 6.88 4.25 8.64
3.52 8.29 1.67 2.27 3.71 8.63 9.08 13.63 27.96 12.36 5.26 8.36 12.42 12.87 10.2 8.51
1.58 2.26 1.83 0.98 4.27 1.8 5.48 2.77 4.42 6.12 4.55 7.0 19.75 12.77 5.65 13.51
86.11 119.94 17.29 24.05 32.16 29.63 46.73 40.6 44.15 66.9 41.92 40.92 30.46 30.7 35.53 41.37
1.05 2.06 0.3 0.19 0.59 0.89 1.32 0.51 0.88 0.73 0.71 0.38 0.89 1.32 1.43 2.07
0.67 1.65 3.84 3.95 8.34 8.52 5.96 6.72 0.04 0.16 19.95 17.74 0.38 0.04 0.0 0.17
39.65 261.48 71.03 93.86 65.79 52.59 46.85 70.96 99.6 20.07 365.64 353.82 79.4 72.67 78.76 67.38
0.79 0.19 0.0 0.0 0.0 0.0 0.0 3.69 0.42 0.0 0.0 0.0 18.5 3.85 0.0 12.27
11.07 13.37 3.47 1.46 3.08 3.82 4.02 5.6 10.31 12.24 6.62 5.58 4.52 5.42 4.98 8.64
64.31 67.03 231.48 238.72 329.33 66.04 130.88 65.62 146.6 108.5 124.34 161.96 30.19 37.35 35.38 35.84
61.15 53.17 1.22 0.68 0.78 0.69 25.42 3227.39 4206.52 3916.18 4.57 8.0 33.01 30.59 16.78 22.69
42.43 14.28 3.19 3.64 3.71 6.55 13.1 10.48 14.51 8.54 10.38 7.69 13.51 18.34 10.1 18.69
11.31 10.64 38.36 30.08 65.94 27.0 25.45 6.25 6.14 8.43 22.82 32.35 16.83 15.82 11.12 24.2
6.86 76.06 8.34 7.54 12.7 30.92 62.78 79.53 82.1 37.21 14.22 27.13 10.87 9.02 7.58 12.44
7.62 0.05 0.37 0.4 0.53 1.12 8.26 24.6 0.31 0.5 22.18 11.34 42.53 52.84 22.3 47.54
1.07 0.15 0.3 0.66 0.62 0.64 0.9 0.62 0.0 0.0 0.14 0.0 4.24 1.83 1.6 1.94
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.46 4.64 1.95 3.19
6.95 4.53 22.73 26.86 32.97 28.06 23.1 12.7 6.81 6.05 28.03 19.83 32.91 30.76 18.55 26.62
0.05 0.11 4.59 5.2 16.97 34.43 6.35 21.53 0.26 0.07 23.13 8.22 0.17 0.04 0.16 0.38
0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.21 1.5 0.0 1.47
0.74 0.03 0.66 0.83 3.18 1.48 1.43 2.39 0.0 0.02 0.24 0.79 14.87 18.02 11.62 10.88
45.58 28.64 710.09 858.96 431.4 496.74 46.72 61.96 39.48 55.4 90.3 73.41 19.95 15.82 24.12 20.34
1.41 0.75 0.67 0.76 1.3 0.94 2.01 1.12 3.49 4.56 5.73 6.04 5.43 4.19 3.74 4.32
1.28 3.47 0.0 0.0 0.0 0.0 0.04 1.28 4.16 2.57 0.0 0.04 1.08 0.96 0.85 0.99
0.04 54.74 0.17 0.02 14.68 15.43 23.48 17.72 0.0 0.0 0.0 0.0 15.18 14.09 9.91 13.46
0.0 0.05 3.57 11.87 5.1 9.09 0.1 0.01 0.16 0.0 0.33 0.46 2.18 1.44 1.17 1.73
3.39 2.09 68.4 68.34 85.98 67.57 8.34 4.16 8.42 7.25 15.47 6.25 3.86 1.88 1.34 3.35
26.39 23.49 17.67 24.98 32.93 51.18 71.81 42.4 86.25 52.98 49.38 56.78 41.92 43.1 38.68 53.14
3.41 0.68 3.46 5.55 2.16 1.62 5.9 3.78 1.08 0.83 2.4 1.2 2.22 2.87 3.12 4.86
52.09 31.23 165.6 177.81 102.24 88.21 96.91 27.69 64.03 53.77 44.57 103.0 24.18 23.97 26.73 30.13
9.59 3.5 946.24 774.6 665.36 603.66 4.23 12.81 7.54 4.65 55.42 49.0 12.73 10.39 14.55 18.48
12.99 6.86 2.8 2.99 5.25 6.38 6.66 2.14 3.52 5.06 8.28 8.16 8.51 10.21 8.05 9.18
83.85 107.56 149.35 131.37 194.47 126.22 331.21 124.1 283.17 376.71 222.08 205.28 81.88 83.81 75.2 89.07
8.02 5.73 12.16 15.38 10.64 15.16 19.25 12.16 5.57 3.0 19.61 17.59 8.46 8.12 8.9 10.81
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.23 1.17 0.0 1.35
10.97 39.5 49.82 71.8 154.48 53.14 108.44 5.91 8.12 3.98 39.1 39.18 1.63 0.67 1.02 2.63
7.4 6.68 3.08 2.75 3.88 3.81 8.09 4.9 5.76 7.5 9.56 10.43 7.55 7.76 7.68 8.78
32.09 21.92 16.78 14.55 18.55 25.72 26.45 12.5 11.9 16.1 25.85 31.17 26.88 30.53 27.88 34.4
0.0 0.0 36.03 43.03 36.89 24.02 1267.88 10.35 56.06 15.2 25.54 33.49 0.47 0.88 0.0 1.3
49.42 10.95 47.2 32.48 40.24 63.17 35.4 12.32 11.41 16.1 45.99 42.05 41.94 34.72 35.96 38.97
67.46 80.16 25.59 26.33 40.47 44.74 68.62 49.84 47.0 37.29 59.28 60.51 17.78 18.35 19.97 16.06
0.99 0.75 0.29 0.36 0.34 0.35 1.26 1.97 1.21 1.12 0.82 0.3 1.33 1.38 0.58 1.17
1.57 0.51 0.6 0.71 4.41 1.36 4.33 20.47 11.25 15.63 16.29 10.83 2.05 1.45 1.43 4.09
16.82 13.2 44.49 36.89 64.56 22.69 12.26 3.17 1.26 0.69 7.83 6.5 10.15 10.35 5.96 9.59
1.74 1.0 2.62 2.3 1.2 0.71 3.12 2.77 0.23 0.33 1.64 2.29 4.7 2.84 2.03 6.53
28.88 19.01 7.96 9.13 18.35 16.84 47.64 35.9 133.01 207.35 56.44 49.94 16.13 15.16 13.54 18.25
74.51 27.21 155.56 105.58 89.28 107.06 327.78 98.26 106.78 59.08 113.36 275.38 365.38 444.49 232.77 324.29
11.05 14.81 2.14 3.29 5.07 5.02 18.71 19.57 8.39 7.71 7.64 6.68 24.87 23.27 13.46 18.75
10.09 8.0 17.57 20.0 20.33 17.81 10.35 6.99 16.98 21.81 21.6 18.39 5.0 5.75 4.11 5.93
21.53 8.11 2.44 1.69 3.07 3.13 15.01 10.99 15.66 17.82 11.77 7.27 9.72 8.85 7.31 9.96
6.18 22.7 4.44 8.6 7.63 7.31 30.58 13.31 15.86 14.37 16.04 13.0 4.65 4.02 2.54 5.99
1.45 0.72 0.3 0.22 0.09 0.42 1.88 3.29 0.1 0.07 0.0 0.16 9.4 10.62 4.3 8.11
3.93 27.07 49.56 35.02 70.42 43.39 39.05 23.81 23.32 17.59 35.22 43.74 19.23 21.83 9.89 10.65
1.29 0.0 1.68 1.4 2.9 1.65 3.31 8.37 0.02 0.0 0.12 0.99 10.95 10.32 4.81 7.0
2.22 1.81 3.94 4.71 6.85 7.19 9.43 1.28 3.28 2.52 2.91 1.98 5.09 4.11 2.63 5.04
1.41 0.48 0.67 0.56 1.55 2.0 1.43 0.54 0.87 0.62 1.89 0.74 1.83 1.6 0.9 2.66
156.31 155.84 74.01 49.83 69.99 87.33 105.03 98.17 169.81 60.16 403.73 510.26 102.94 93.2 76.6 124.12
5.87 4.63 0.48 0.62 0.51 0.24 1.3 4.95 6.95 16.6 1.18 0.0 10.59 5.78 0.0 17.01
2.18 6.44 5.8 7.52 14.36 25.34 11.72 7.26 6.38 6.5 28.79 20.36 4.85 5.24 4.54 6.57
14.53 14.82 43.54 43.8 72.9 45.19 31.14 9.32 22.94 39.63 74.67 42.11 5.38 3.47 4.14 6.47
14.07 38.2 9.65 12.31 8.76 7.65 19.3 55.88 114.15 107.26 14.0 16.02 14.35 12.81 12.92 18.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)