Heatmap: Cluster_323 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.09 -1.47 -0.6 0.06 -0.01 1.15 0.43 -0.23 -0.22 0.15 1.19 -0.32 0.07 -0.55 -2.22 0.08
-0.34 -0.61 -0.88 -0.32 -0.16 -0.05 0.4 -0.42 0.3 -0.05 0.43 -0.34 0.57 0.14 -0.26 0.62
-1.09 -1.03 -2.57 -2.46 -3.16 -3.96 -2.43 2.04 1.71 2.2 -1.6 -1.93 -0.89 -1.07 -3.24 -0.69
-0.32 -0.7 -0.76 -0.37 -0.26 0.35 0.34 0.34 0.02 0.04 0.23 -1.03 0.47 0.19 -0.38 0.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.