Heatmap: Cluster_401 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - -0.41 -0.58 3.74 - - - - - - 0.27 - -
-5.78 - -1.66 -1.48 -0.03 3.69 0.3 - - - -3.31 -3.42 - - - -
- - 2.52 -1.72 - - 2.55 2.03 - - - - - - - -
-4.97 -2.73 -0.33 -1.8 -2.42 0.69 -2.22 -1.16 2.45 1.64 1.36 -0.56 - - -1.25 -
-3.24 3.89 -2.28 -2.93 -2.17 -1.29 -3.96 - - - - - - - - -
-0.57 3.38 -2.6 -0.67 - -2.3 - - 0.58 0.05 -0.59 -1.21 -1.69 - - -
- - -1.04 0.61 0.9 1.92 0.1 1.66 - - -0.39 -0.49 - - 0.85 -0.25
- - -0.76 0.15 1.24 1.43 0.59 -2.15 - - 2.61 0.47 - - - -
- -6.87 1.56 1.83 1.91 1.25 -0.46 -4.92 -3.65 -2.91 0.22 0.28 - - - -
- - - - - 3.03 2.97 - - - - - - - - -
- -5.08 -2.98 -2.24 -3.44 -2.61 2.86 2.79 -4.01 - -2.33 -2.02 - -2.16 -1.68 -2.78

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.