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Heatmap: Cluster_192 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
4.54 2.09 3.01 5.61 4.64 3.36 26.05 16.13 9.5 4.22 8.05 2.26 26.0 19.7 12.85 21.37
0.33 0.0 0.0 0.0 0.0 0.0 0.02 2.3 0.19 0.0 0.0 0.0 225.5 141.77 75.26 152.91
0.86 0.0 0.0 0.04 0.11 0.03 0.04 11.03 0.1 0.0 0.0 0.05 444.11 334.11 260.29 318.6
0.64 1.23 1.02 1.97 3.09 2.0 15.44 5.39 20.8 6.11 14.44 3.04 40.99 19.9 7.0 40.42
1.83 2.98 7.81 11.52 12.25 7.83 29.53 19.84 2.05 0.9 1.44 0.27 35.65 26.23 20.59 37.22
23.96 29.63 35.85 37.85 36.88 31.43 78.64 49.7 80.16 80.71 64.54 62.55 30.19 24.69 18.47 20.51
5.85 8.36 7.33 10.16 10.86 6.93 24.52 11.59 3.41 3.31 7.84 6.89 23.64 17.48 5.74 15.81
21.22 5.72 7.66 10.06 5.31 9.88 131.25 126.49 71.15 169.49 55.65 31.72 20.4 19.98 13.15 17.5
9.98 11.02 2.18 0.52 1.75 2.2 2.84 7.93 10.13 19.19 1.99 0.78 18.83 21.42 8.83 10.93
1.43 48.42 4.85 3.43 6.95 7.21 5.29 6.45 0.0 0.0 0.49 1.07 99.85 97.74 43.52 31.37
0.68 0.0 0.0 0.05 0.02 0.02 0.64 3.11 0.0 0.0 0.0 0.03 29.7 43.91 2.3 21.32
6.49 1.37 0.28 0.24 0.65 0.79 1.87 7.82 0.33 0.0 0.94 1.2 40.79 29.78 18.07 33.98
3.68 13.81 26.75 43.04 4.3 3.12 38.68 107.64 100.49 163.22 44.54 22.05 7.69 3.87 1.16 5.1
0.69 8.09 0.15 0.06 3.33 2.26 4.69 0.95 0.29 1.0 1.97 1.53 19.02 16.68 7.62 10.51
10.55 13.01 0.81 2.97 0.08 0.36 0.05 0.06 346.02 226.85 66.63 9.05 340.31 242.08 153.86 261.92
0.43 1.42 0.44 0.08 0.29 0.13 1.71 7.43 0.05 0.21 40.95 37.82 239.68 212.45 78.77 159.54
6.26 0.08 2.33 3.88 29.97 16.62 3.08 28.0 7.57 7.5 8.88 11.94 35.92 33.36 16.82 13.87
6.54 2.02 4.72 6.25 5.24 6.33 13.18 4.93 6.7 9.2 16.88 12.17 13.51 11.65 4.83 12.28
6.07 3.16 0.41 0.66 1.02 2.64 4.51 33.48 24.89 26.13 5.54 2.22 9.04 5.75 2.01 8.91
0.39 0.86 0.22 0.24 0.86 1.09 0.98 1.17 0.03 0.03 0.3 0.4 43.63 32.07 1.73 22.1
7.34 2.11 0.27 0.62 1.0 0.37 0.71 8.71 8.3 8.38 0.87 1.53 9.76 11.13 2.8 8.77
0.0 0.0 0.0 0.0 0.0 0.16 0.08 2.18 0.0 0.0 0.0 0.0 5.1 11.64 0.0 1.84
151.13 21.91 0.9 0.24 2.94 2.33 0.85 2.09 0.1 0.0 0.0 0.29 318.96 341.22 31.28 303.18
0.73 0.02 0.53 0.44 1.63 0.69 2.49 2.33 0.1 0.0 0.11 0.46 13.69 16.65 11.34 12.6
3.49 2.29 0.02 0.06 0.33 0.28 0.27 2.46 0.03 0.14 0.11 0.39 8.69 7.43 3.9 5.43
30.66 4.51 2.42 2.59 1.67 3.21 7.71 21.19 19.43 37.15 13.05 9.43 17.98 16.44 9.7 20.66
10.96 12.37 21.54 19.15 44.89 49.73 61.6 3.13 1.86 1.46 230.43 133.93 15.21 12.22 5.77 16.56
0.92 55.92 2.86 2.77 1.56 4.25 9.63 10.4 9.77 8.74 1.96 1.94 2.39 1.48 0.13 2.0
0.4 6.0 0.88 1.52 2.05 3.3 1.94 1.22 0.37 0.04 3.31 2.67 137.44 130.5 46.65 75.92
5.34 10.45 87.12 23.26 24.91 15.01 60.0 10.31 1.44 2.52 12.57 11.99 11.82 7.36 3.91 9.33
25.21 24.09 13.89 18.5 18.53 19.66 40.15 12.76 24.23 17.59 32.24 21.42 28.33 17.25 9.72 22.7
18.82 10.65 28.83 25.63 21.94 7.97 20.83 20.06 16.03 16.59 9.52 12.58 29.06 30.89 14.07 18.77
0.0 0.0 0.16 0.0 8.98 8.71 59.11 50.11 37.83 15.06 33.12 9.57 136.82 100.54 70.44 93.39
2136.33 1460.43 1264.94 963.94 1183.9 1518.59 1123.2 774.88 777.97 820.24 851.95 1025.2 2318.69 2467.11 1505.41 2153.38
1.18 0.85 2.98 1.6 1.8 4.15 2.98 7.55 0.0 0.0 0.43 1.04 50.77 51.87 20.31 29.14
13.37 63.34 0.73 0.57 1.49 1.84 0.94 2.07 0.42 0.49 0.55 0.36 44.18 41.71 6.2 27.64
0.29 0.05 0.63 0.64 0.64 0.42 0.27 5.39 10.4 8.12 28.81 4.5 15.04 20.73 1.87 12.67
0.18 0.07 0.34 0.38 1.0 1.67 0.38 2.7 0.0 0.0 0.0 0.44 38.91 47.16 6.93 20.38
2.69 4.53 3.31 5.2 1.21 6.72 2.25 3.62 0.0 0.0 0.06 0.81 61.14 58.06 8.05 26.45
58.64 11.28 41.17 32.45 66.53 12.84 4.64 111.53 1.16 2.97 4.72 5.57 26.18 30.34 10.48 12.93
0.46 0.04 0.15 0.0 0.05 0.08 0.34 0.29 0.0 0.03 0.07 0.03 3.65 3.16 0.86 3.14
1.16 0.51 1.25 1.5 0.62 1.07 1.0 1.42 0.33 0.39 0.25 0.28 5.42 6.11 3.24 3.78
6.31 4.18 10.42 13.94 16.94 26.82 11.51 9.7 4.75 3.3 10.38 5.59 27.85 20.45 8.45 18.63
0.31 3.7 27.92 22.6 15.78 6.38 36.93 50.97 0.68 0.43 32.24 40.35 4.79 3.45 1.19 3.14
16.04 34.67 44.74 27.75 67.43 98.75 18.61 8.83 6.26 6.69 10.41 18.44 65.31 92.94 36.75 46.48
9.29 3.24 2.08 5.1 2.53 2.3 9.38 9.48 0.5 0.48 4.15 3.69 12.2 10.67 2.5 7.3
6.18 3.16 0.52 0.22 0.08 0.07 1.69 4.11 6.17 3.32 1.59 0.66 21.84 16.3 12.01 16.47
0.36 0.82 34.4 36.76 21.06 21.96 32.47 8.3 0.6 2.5 70.28 70.52 61.26 50.95 11.91 58.76
23.36 8.15 2.79 4.45 5.24 4.94 41.87 16.77 27.82 9.83 19.7 4.33 56.41 35.58 26.76 42.2
0.0 0.0 0.66 0.26 0.33 0.15 42.42 27.57 18.79 10.22 17.16 5.4 79.33 56.08 28.69 67.35
0.08 0.23 0.0 0.0 2.08 1.87 20.14 7.69 4.73 4.47 8.11 4.01 32.86 16.79 12.81 26.33
2.75 1.33 1.06 1.18 1.08 0.91 5.35 2.9 4.18 2.66 4.68 1.92 7.1 5.91 4.08 5.32
12.47 0.32 2.69 1.99 3.37 5.44 8.63 24.43 0.0 0.0 0.26 4.24 252.3 287.01 45.94 175.08
2.14 1.0 0.35 0.97 1.1 0.51 2.87 2.22 8.89 6.06 2.2 0.78 4.38 2.26 1.32 4.8
52.44 28.91 3.54 4.65 7.84 6.0 63.75 19.89 74.9 24.89 22.96 5.51 43.95 30.39 23.96 48.69
15.94 13.59 0.86 0.0 18.68 12.75 33.61 16.66 0.46 0.19 0.99 0.74 55.04 37.98 22.27 49.97
39.03 3.26 7.92 6.52 6.88 6.37 5.75 4.23 0.97 0.61 0.62 2.31 27.08 27.73 15.29 27.84
8.39 53.79 7.02 7.45 8.37 8.05 14.05 27.16 193.32 102.96 15.64 11.35 104.57 64.26 51.11 54.99
0.21 0.13 0.03 0.0 0.0 0.19 0.0 0.11 0.0 0.0 0.0 0.04 24.32 29.13 14.22 18.18
1.52 0.22 1.85 1.48 4.49 3.45 2.55 3.26 4.96 2.97 2.63 1.35 9.48 5.21 2.86 7.24
0.03 0.05 9.89 9.97 20.0 6.29 2.4 2.72 3.35 3.23 5.44 6.5 4.77 3.84 0.65 2.72
0.46 0.02 0.25 0.0 0.43 0.53 0.0 0.19 0.0 0.0 0.11 0.05 20.67 28.05 5.61 11.36
9.16 11.81 1.49 1.49 3.93 3.19 4.92 0.85 5.94 2.37 2.99 0.62 27.05 16.29 8.14 24.69
9.84 7.42 2.13 2.6 5.14 2.65 9.58 3.96 5.48 5.55 4.1 2.34 16.16 6.7 2.8 14.37
5.14 1.31 3.47 4.84 6.38 5.41 4.8 4.16 6.93 5.96 3.41 1.33 7.37 5.11 2.33 6.95
46.21 72.31 66.79 40.12 55.31 43.96 194.35 91.26 83.79 86.25 65.58 74.18 104.58 69.49 31.81 92.69
3.86 2.48 4.22 4.2 7.73 7.78 0.39 1.44 0.48 0.0 0.78 1.2 41.7 50.95 26.19 31.37
0.24 0.09 17.49 11.03 25.02 4.57 10.85 11.88 3.14 3.2 4.72 4.71 8.39 5.43 0.63 5.33
248.75 830.47 0.68 1.17 0.13 0.0 1.32 1.8 0.65 1.46 4.48 1.39 14.62 8.69 5.47 16.62
12.48 17.43 10.41 8.52 8.52 9.27 37.44 20.46 39.46 19.83 15.48 5.3 38.48 24.45 18.13 33.55
0.66 0.49 0.17 0.17 0.07 0.4 0.0 0.04 0.0 0.0 0.05 0.25 9.34 9.27 2.51 8.33
19.13 397.68 0.05 0.0 0.23 0.36 0.0 8.25 19.55 24.33 0.0 0.0 15.91 15.63 1.56 12.77
0.69 0.33 0.1 0.0 0.0 0.0 38.42 22.5 0.0 0.0 0.0 0.0 62.12 33.44 22.69 49.28
0.36 0.63 11.79 9.72 13.57 10.25 15.39 2.83 0.42 0.32 3.01 3.22 5.39 3.72 1.16 1.89
4.41 10.67 7.99 7.06 7.89 4.89 13.86 5.78 2.03 0.69 1.88 0.93 19.26 13.59 9.3 15.55
7.64 5.2 14.2 14.66 18.23 11.31 26.47 5.17 10.1 5.91 9.73 7.02 8.3 8.55 3.25 7.17
0.0 22.29 0.61 1.69 0.91 2.68 7.29 357.22 408.15 140.5 1.27 2.4 4.45 5.4 0.0 2.43
6.65 1.11 0.42 0.2 0.55 0.57 3.71 10.22 2.31 4.23 3.72 1.27 84.1 87.23 18.3 58.67
25.8 37.35 1.19 1.52 12.27 15.72 5.02 18.57 17.99 24.05 5.94 2.41 20.31 16.7 7.65 18.86
2.27 6.3 2.85 2.68 2.2 6.71 27.53 7.41 12.02 4.82 19.14 5.56 11.29 4.98 2.99 8.87
0.04 0.01 0.97 0.85 0.66 1.49 1.38 5.78 0.08 0.17 1.96 0.7 5.65 3.29 2.44 5.25

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)