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Heatmap: Cluster_76 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
10.27 12.51 5.61 6.62 5.98 8.05 13.03 19.97 22.26 23.06 4.57 6.28 4.71 5.5 3.99 5.45
255.52 150.96 85.18 49.43 87.41 98.55 167.64 94.4 78.57 81.67 122.19 113.39 242.37 342.43 333.19 209.03
11.81 1.96 1.07 0.28 1.13 2.31 4.25 128.52 51.44 47.34 1.0 1.31 73.64 115.6 98.23 68.23
130.43 200.36 130.99 114.49 132.12 169.04 306.36 147.23 146.81 137.1 188.6 164.35 235.76 297.77 361.88 409.41
27.8 39.22 5.57 4.33 5.86 6.9 12.37 4.92 4.04 3.27 3.87 3.51 26.58 32.43 24.16 24.54
28.75 19.76 2.05 2.47 2.1 3.72 35.22 16.23 13.6 13.09 11.68 11.01 53.91 73.79 43.5 41.73
1227.12 3226.26 436.83 498.07 765.02 937.73 766.01 472.86 1560.74 2134.26 1049.33 1708.96 3474.64 4723.17 4905.72 3585.53
27.66 18.23 8.94 3.8 10.08 12.63 28.12 14.63 6.82 13.19 22.75 19.77 83.27 103.97 92.91 87.99
121.73 5.26 13.15 5.49 13.37 18.79 31.46 19.09 0.39 0.21 3.09 5.09 449.27 597.88 307.26 209.38
117.82 102.07 12.06 11.19 14.76 15.19 31.13 22.01 10.91 7.71 10.53 13.47 56.93 73.17 67.58 50.51
13.53 5.37 3.98 5.41 6.18 10.63 15.68 11.5 7.55 8.66 9.87 8.48 37.35 42.07 57.74 39.08
145.0 81.25 53.91 52.83 40.16 57.77 155.71 84.31 67.54 64.14 98.53 124.49 148.38 183.06 143.22 165.11
415.57 440.8 188.86 188.59 312.41 242.99 366.31 238.66 123.4 105.65 109.61 196.08 396.78 435.39 496.92 353.03
78.5 35.55 39.14 30.88 19.4 29.55 44.73 178.91 257.32 212.18 37.99 49.68 116.16 128.51 135.86 134.86
189.26 235.18 168.78 147.09 198.31 221.76 166.0 91.54 62.95 49.66 104.19 149.74 277.49 383.25 429.43 268.57
191.74 68.8 53.48 29.24 61.17 83.13 134.0 57.0 22.52 46.44 128.77 73.21 251.46 321.6 378.93 274.72
134.45 103.43 52.97 58.43 53.75 74.11 117.94 58.33 98.31 88.18 151.75 125.56 131.35 156.66 167.56 163.83
3625.89 2096.74 1487.3 1262.33 991.77 1244.15 3191.6 1581.79 914.94 627.26 1721.08 2356.8 3745.47 5929.1 6553.98 3808.01
41.07 49.9 3.4 2.47 0.0 0.0 40.37 22.17 29.59 27.58 23.4 19.67 31.18 53.49 44.41 22.4
344.81 136.31 18.69 20.16 33.22 60.87 103.24 69.18 21.29 17.62 57.55 46.48 262.12 305.08 289.08 286.06
97.0 142.59 46.73 28.52 49.85 65.94 71.27 43.47 18.3 6.68 12.74 26.97 102.87 128.44 146.59 86.16
774.34 423.57 214.21 118.52 148.41 194.49 496.17 264.94 197.78 182.77 225.84 384.44 935.63 1356.05 1558.29 1068.9
69.9 52.94 23.06 11.99 19.06 19.7 25.89 17.13 23.33 23.61 18.67 17.71 58.76 71.73 77.02 64.05
6.33 0.13 0.83 0.17 0.37 0.61 0.48 2.24 0.0 0.0 0.0 0.07 75.41 121.59 63.12 64.86
319.51 69.7 29.44 18.15 27.11 26.11 273.01 145.97 37.89 33.49 60.68 65.28 382.16 548.73 544.18 628.48
2.6 6.81 0.48 0.88 3.04 4.79 1.98 7.21 0.37 0.19 0.1 0.09 5.79 7.27 3.65 8.09
14.31 8.41 1.62 0.9 1.99 2.26 10.31 18.69 35.73 38.65 11.03 11.02 21.6 29.27 15.81 25.43
0.04 0.0 0.0 0.18 0.0 0.0 0.04 4.07 1.06 0.99 0.0 0.0 37.52 56.6 25.27 30.11
500.66 306.05 138.16 136.7 158.93 162.05 418.95 170.53 201.1 254.39 282.83 363.62 293.72 350.13 373.35 418.61
6.68 7.57 0.92 1.34 1.59 1.93 4.95 7.54 6.47 6.75 3.31 1.93 7.45 7.53 8.37 9.89
556.09 112.74 81.64 30.16 82.97 109.33 58.03 38.32 1.93 1.22 6.25 16.86 264.02 321.57 309.55 226.09
89.01 220.01 72.85 38.36 107.54 83.59 114.47 71.85 24.61 15.05 34.18 56.72 131.19 178.0 192.84 119.37
109.97 50.46 89.16 62.85 87.15 83.45 129.11 83.66 30.48 17.38 77.44 94.64 305.37 355.42 301.1 290.9
45.25 51.94 5.73 6.52 7.2 7.05 8.63 75.26 36.27 20.95 3.62 5.04 21.79 34.98 30.28 30.0
71.19 40.14 96.33 129.2 132.28 305.51 179.58 50.79 96.68 131.22 485.2 372.61 148.06 143.58 115.88 188.78
48.79 96.5 24.56 26.3 44.49 44.18 21.02 10.59 18.28 10.02 6.7 14.7 189.1 327.09 315.38 210.39
447.43 463.91 176.01 125.19 215.66 209.3 657.58 373.19 614.91 424.26 386.84 569.62 254.1 315.91 339.58 255.88
166.2 218.3 34.27 28.18 61.97 50.1 80.29 58.2 40.78 30.88 94.03 113.31 327.98 360.83 320.08 316.16
146.65 79.1 18.06 12.17 24.87 29.77 46.82 25.96 63.53 48.52 38.28 33.05 84.14 110.64 124.29 121.84
0.42 1.23 6.31 3.16 5.77 7.77 0.13 0.12 0.18 0.22 0.19 0.48 2.62 4.61 2.12 3.47
11.2 8.1 4.38 1.7 3.26 3.86 5.47 3.64 1.01 1.43 2.92 2.58 17.37 24.47 31.65 19.93
347.02 101.41 69.05 45.86 97.62 125.55 260.56 117.72 23.72 30.0 141.3 215.27 298.03 393.05 281.57 301.8
723.08 413.39 317.71 234.35 186.92 266.38 629.63 407.62 669.98 589.6 769.08 908.65 792.21 1124.26 1413.72 958.27
565.42 177.19 171.46 127.92 150.32 178.97 326.13 212.77 144.73 115.66 222.06 223.36 426.98 509.87 608.42 442.06
69.57 61.39 70.89 51.47 21.26 19.08 11.94 29.53 22.37 20.62 9.34 10.64 42.9 58.37 65.49 42.29
13.27 7.49 23.82 33.32 14.77 13.77 28.37 26.82 23.03 18.07 12.77 12.6 33.18 47.28 33.35 37.1
562.7 179.29 296.8 296.36 284.7 317.5 602.86 322.75 252.83 190.96 544.51 750.47 734.55 860.55 861.15 834.64
314.57 161.73 50.33 51.6 46.74 52.21 152.21 80.33 59.6 52.99 71.95 65.62 131.41 165.93 179.98 132.73
682.79 403.25 116.51 116.87 131.31 129.17 384.62 254.56 193.19 109.82 191.04 243.59 461.68 577.18 573.67 487.71
277.4 306.7 147.54 98.69 168.5 158.71 299.63 148.94 103.17 80.32 107.05 180.2 154.84 204.5 278.73 156.82
15.48 22.77 2.71 1.96 3.9 4.87 9.4 8.78 7.26 5.03 4.07 3.91 25.55 32.78 22.07 28.27
347.12 299.77 55.35 42.8 55.16 88.48 209.99 115.1 87.2 55.33 133.28 136.16 364.36 522.78 401.26 338.71
11.94 3.5 2.21 3.12 2.69 2.29 2.06 2.6 0.48 0.5 1.22 0.76 14.23 19.41 16.31 15.24
20.32 73.74 7.28 6.56 10.55 7.4 6.94 6.06 1.72 0.64 0.92 2.8 54.49 64.3 43.44 56.69
1069.65 1059.26 243.79 207.0 288.0 467.27 652.8 465.69 219.98 143.7 189.5 310.5 6152.69 9543.04 7885.73 5477.35
9.5 1.49 1.52 0.15 2.23 1.54 2.45 5.09 0.0 0.18 0.19 1.22 126.41 162.56 105.5 88.08
637.12 263.46 66.28 62.84 120.13 138.33 259.23 145.41 228.01 151.72 168.06 202.83 300.12 357.93 367.74 221.16
1.78 0.0 0.42 0.45 0.08 0.07 0.8 1.17 0.0 0.0 0.46 0.21 39.22 58.52 29.17 24.57
249.11 280.58 57.98 42.02 66.12 70.59 330.37 179.12 230.63 161.21 173.53 305.49 241.21 313.68 331.97 217.12
119.56 134.97 27.53 24.39 26.97 27.44 98.56 71.86 85.66 96.08 71.2 78.92 55.66 73.1 67.7 101.17
79.54 26.24 12.09 8.84 15.35 13.99 41.39 33.1 13.78 14.68 29.75 28.52 102.81 113.92 97.91 74.8
1051.64 466.29 452.31 253.01 314.93 377.41 365.68 204.16 87.0 67.17 198.39 255.95 682.1 980.27 1327.91 636.81
1061.57 492.31 704.25 489.87 458.82 570.08 947.22 567.6 986.08 698.88 827.89 1093.07 1170.7 1562.94 1846.37 1342.38
57.64 36.77 197.59 184.87 147.08 177.65 56.06 30.94 31.68 32.88 119.01 89.0 63.77 69.28 63.99 67.54
56.34 42.05 19.95 9.92 21.95 22.33 97.84 32.66 37.93 38.61 52.9 45.0 55.26 76.38 86.2 55.38
101.76 109.2 19.9 18.88 27.18 28.69 72.68 41.25 41.02 35.2 57.92 58.53 68.89 79.45 72.04 71.34
0.97 4.8 0.0 0.23 0.07 0.0 0.0 0.03 0.0 0.0 0.0 0.0 21.41 32.59 18.17 12.0
118.05 114.48 58.16 55.38 64.68 65.27 132.5 68.27 64.16 56.09 73.83 70.16 88.94 139.42 156.71 97.25
57.51 34.38 4.77 3.64 10.16 10.85 24.61 15.31 4.4 2.37 6.12 4.76 34.03 45.38 42.54 32.86
120.9 106.81 27.5 22.43 28.89 42.76 86.0 44.76 65.87 50.02 75.78 73.49 176.62 264.94 246.95 176.74
444.36 390.89 117.54 79.96 178.51 161.51 415.88 265.17 154.57 114.79 170.69 242.96 602.12 770.63 560.92 503.23
23.23 42.34 6.29 8.11 11.97 12.87 29.93 16.89 8.88 10.75 17.18 21.43 49.57 60.5 42.94 40.57
21.93 32.01 3.79 1.55 3.06 3.76 6.35 4.87 8.96 11.77 3.38 3.95 27.37 28.18 26.33 28.8
2.79 0.5 0.75 0.49 1.51 0.63 1.49 4.16 1.62 2.63 0.41 0.58 72.79 83.33 134.66 65.27
1892.65 712.03 247.05 142.75 233.55 325.76 845.98 420.13 230.71 213.57 427.21 490.5 1021.34 1487.86 1813.94 790.11
5.17 2.78 1.54 1.59 2.49 2.39 0.67 0.56 2.37 1.68 1.79 1.05 4.74 6.11 4.4 4.56
64.1 65.41 12.51 17.08 19.97 24.95 150.2 121.4 114.43 100.67 106.52 93.27 161.56 193.1 153.33 175.87
8.96 2.19 28.47 30.11 25.89 41.86 56.75 37.02 0.23 0.0 0.0 0.22 180.06 208.32 223.96 167.44
24.74 9.6 1.91 2.8 1.17 3.46 10.31 13.49 6.94 4.78 5.45 2.53 23.59 33.66 16.71 21.9
0.67 0.78 2.88 3.77 1.38 1.29 0.41 0.2 0.0 0.0 0.1 0.0 8.36 12.49 10.47 3.2
33.0 28.94 3.68 2.71 4.08 5.55 21.26 12.58 18.38 21.3 18.08 19.76 34.86 35.76 38.97 54.6
51.37 10.11 3.37 1.21 3.6 3.13 8.78 5.74 0.84 1.31 3.96 2.2 162.36 191.29 143.72 111.95
981.35 554.69 329.06 243.21 207.86 223.91 456.57 203.69 127.94 118.05 184.26 315.35 553.51 875.18 1044.91 681.34
194.95 71.86 22.71 20.7 25.35 24.29 77.4 43.93 55.69 45.31 54.5 60.88 65.73 89.11 94.6 73.87
741.69 518.0 304.46 154.83 192.4 225.84 620.36 305.37 308.32 254.04 384.59 472.08 454.3 659.39 850.93 500.87
4.99 10.58 0.87 0.35 1.85 1.66 3.77 2.12 3.37 1.54 0.96 1.22 21.97 24.73 19.38 14.7
103.42 64.86 22.64 19.69 21.61 28.07 76.11 43.73 21.96 32.82 61.6 49.47 89.59 125.65 84.77 64.45
539.35 181.96 149.08 81.08 117.42 133.51 342.92 193.74 126.96 75.35 195.45 249.01 422.03 643.27 876.67 336.64
21.83 46.72 32.23 13.03 34.83 31.02 25.28 11.53 1.67 1.98 5.88 8.53 98.98 182.83 177.68 64.59
11.54 7.58 3.21 0.68 3.8 2.67 6.28 19.67 28.16 34.16 3.7 4.07 27.36 31.06 18.58 35.27
82.2 65.48 2.8 3.65 5.94 4.03 26.08 12.75 44.2 31.69 35.48 28.97 59.66 71.4 78.38 57.52
1976.99 1010.27 502.57 397.55 635.01 724.08 994.05 633.84 652.06 435.76 619.04 764.68 1529.81 2269.03 2692.96 1444.84
2.98 1.01 3.98 4.51 0.0 0.04 2.67 2.27 1.2 2.37 3.46 3.33 15.72 17.67 16.24 16.51
0.41 1.42 0.0 0.0 2.05 1.98 20.27 12.82 11.5 6.41 15.57 17.68 16.63 26.26 30.24 18.7
186.49 69.84 104.34 63.1 68.04 101.62 430.17 207.88 112.06 95.74 133.85 185.26 370.07 492.18 621.96 412.88
440.2 149.31 95.39 85.33 81.96 89.06 470.14 224.52 130.46 191.37 345.7 391.94 685.84 774.74 775.56 741.03
6.44 9.98 0.66 1.26 0.54 1.63 4.61 6.97 17.62 12.18 4.83 1.99 47.31 60.77 43.16 41.44
67.9 35.87 4.0 4.21 7.52 14.93 5.24 23.32 11.87 10.36 0.09 0.0 112.55 154.26 147.34 154.67
1252.48 607.2 230.49 143.14 199.76 218.78 938.68 429.68 336.33 246.82 426.3 518.75 581.75 900.68 1180.16 505.99
58.04 46.12 12.14 6.84 10.17 8.55 51.86 39.89 18.52 10.68 16.77 23.75 152.48 228.88 214.48 148.0
129.42 70.11 30.43 17.05 46.11 54.56 79.19 37.49 15.67 6.12 20.39 32.17 307.83 408.76 314.61 289.33
119.05 89.23 280.81 199.29 163.12 173.59 257.5 206.5 380.48 245.39 312.08 395.96 817.27 1118.57 1214.3 1125.93
31.38 16.92 14.18 14.51 20.69 20.99 10.29 5.87 12.19 8.47 11.43 11.11 12.61 16.55 12.92 15.36
306.07 232.09 131.47 93.81 142.73 144.69 324.74 161.0 88.23 81.44 149.83 193.92 280.54 325.68 345.0 259.42
956.57 574.89 564.0 419.03 462.59 511.09 681.86 405.21 341.94 235.54 505.64 719.06 526.9 697.95 899.83 508.88
1290.16 760.87 514.06 351.34 470.01 564.16 573.28 378.31 379.92 295.06 575.34 664.82 696.18 1024.5 1366.21 846.7
77.19 63.25 36.59 20.53 40.9 46.14 52.77 26.05 15.26 16.69 28.6 33.79 74.84 94.38 84.42 73.77
147.56 138.47 40.49 33.58 36.0 24.04 64.4 54.45 12.87 7.65 22.3 32.61 204.75 248.83 219.87 195.15
204.19 91.33 42.29 29.99 34.03 33.32 214.65 139.75 104.02 104.8 138.5 154.61 277.14 336.09 344.41 295.4
723.6 256.31 352.47 283.61 241.49 311.9 461.87 262.04 217.33 203.47 423.93 475.96 557.35 723.96 749.63 577.53
49.42 33.81 20.51 18.59 21.23 23.56 21.99 13.25 19.51 11.41 8.82 11.39 36.47 36.2 24.93 45.99
12.12 24.05 3.18 1.67 5.86 6.68 0.32 0.54 0.0 0.0 0.0 2.48 141.96 167.28 180.85 123.06
659.1 774.53 784.12 967.37 2093.08 1405.05 1417.43 383.52 571.67 1225.79 2353.28 3245.85 1647.48 2146.36 1410.18 1369.59
519.68 823.88 486.42 472.01 588.73 498.78 1033.19 455.29 368.56 275.66 410.33 683.79 416.03 526.24 562.4 385.75
154.12 117.67 63.18 52.85 64.09 78.62 116.55 58.15 73.2 64.46 99.03 128.13 160.33 219.25 221.25 192.03
107.31 62.32 55.17 28.44 27.51 22.66 102.78 72.48 41.17 22.48 40.12 73.42 353.39 404.92 445.37 218.16
141.51 56.19 10.58 6.78 9.98 17.7 39.82 26.88 45.71 42.16 40.95 56.07 98.97 117.99 102.27 133.93
328.43 608.44 179.9 143.78 244.28 223.62 281.11 151.34 149.98 111.7 114.28 158.3 487.27 564.04 446.96 437.33
16.59 62.77 3.38 1.75 7.01 4.76 21.91 16.01 9.56 5.7 13.8 16.05 92.83 97.21 76.82 69.9
23.82 31.37 9.93 7.23 9.4 13.8 23.04 12.82 8.48 5.53 11.71 11.12 22.09 36.74 37.67 18.56
45.77 27.51 21.8 11.68 25.55 28.19 27.12 13.95 10.83 9.18 14.24 16.77 105.64 143.41 135.03 103.42
132.47 15.9 10.3 4.55 9.23 11.05 14.83 11.93 12.02 13.4 17.3 17.59 32.01 41.94 38.68 33.08
197.22 130.99 82.32 97.7 70.48 71.15 209.03 118.08 106.8 71.93 160.82 152.11 100.69 135.79 134.28 104.31
1036.94 590.48 804.88 479.93 623.17 695.12 694.87 384.02 474.2 470.95 525.74 666.84 933.96 1271.1 1451.65 1009.41
1.34 0.99 1.12 2.48 1.52 7.9 0.04 0.3 0.0 0.0 0.11 0.0 7.34 9.69 11.85 9.86
10.38 11.32 1.87 1.04 2.74 4.75 4.43 2.74 7.85 4.52 3.86 3.37 24.74 35.58 26.8 18.84
80.68 173.71 31.53 23.48 28.5 35.13 107.07 50.26 103.75 100.58 60.2 79.38 69.72 106.02 111.16 80.0
30.44 17.74 12.96 8.22 15.25 22.93 14.94 6.45 5.65 8.75 11.9 11.33 30.79 35.49 44.43 32.72
393.62 240.12 141.58 136.35 168.78 192.25 221.86 117.61 165.71 165.44 230.38 266.01 267.44 322.12 343.19 267.48
10.2 26.19 2.46 2.02 2.57 2.5 3.93 2.35 1.5 1.72 2.01 2.68 24.3 29.27 25.25 17.64
827.74 464.25 426.14 285.01 423.78 459.59 313.32 258.44 59.1 28.87 117.17 153.58 1318.83 1663.86 1902.87 1214.44
674.65 403.21 554.77 356.2 448.04 634.06 401.43 315.41 123.73 78.55 190.99 255.28 1150.48 1702.22 1684.48 970.3
13.67 12.32 6.73 2.23 9.8 6.77 7.12 4.64 0.82 0.57 1.27 2.54 38.06 46.28 44.32 28.23
0.17 0.0 0.31 0.28 0.0 0.04 0.66 1.39 0.0 0.0 0.0 0.0 34.55 46.03 23.61 26.28
208.58 83.94 25.12 28.42 33.03 28.38 67.22 39.72 33.35 27.01 35.96 46.85 59.99 75.68 85.6 67.3
84.14 192.23 62.23 80.95 87.59 61.28 209.7 124.15 151.91 175.59 100.09 138.02 43.37 46.31 61.51 57.92
0.0 0.0 25.63 16.48 8.65 10.49 79.24 38.72 0.0 0.0 0.0 0.0 125.05 148.03 169.97 145.97
898.05 348.01 618.5 550.09 516.89 629.28 614.68 255.71 488.68 609.14 1043.77 1237.35 450.7 522.38 511.27 601.93
2011.7 983.65 437.24 420.34 384.24 370.9 541.07 278.32 251.76 160.18 429.27 412.94 394.74 427.43 538.57 411.66
23.7 33.96 13.6 9.43 18.72 27.29 32.63 19.09 12.82 9.23 18.66 15.59 40.19 45.1 37.75 43.1
948.73 948.44 293.71 239.05 298.56 283.29 1182.58 549.57 668.76 631.96 663.5 1002.62 919.17 1105.32 1095.22 1202.63
9.66 9.23 8.68 3.49 4.78 1.83 4.2 8.61 0.55 0.25 5.36 7.08 46.52 57.61 31.92 31.73

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)