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Heatmap: Cluster_37 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
0.16 -0.19 -1.03 -0.59 -0.47 -0.6 1.25 0.27 -0.09 -0.11 0.5 -0.65 0.34 -0.49 -0.68 0.45
0.23 -0.8 -1.07 -0.76 -0.8 -0.44 1.06 0.31 0.13 -0.17 0.26 -0.41 0.58 0.01 -0.57 0.53
-3.84 -2.96 -7.26 -7.17 -6.58 -6.14 -3.33 2.83 1.62 1.96 -3.15 -3.46 -1.43 -1.61 -1.94 -1.22
1.09 0.05 -0.55 -1.01 -0.05 -0.31 0.58 0.0 -2.08 -2.19 -0.55 -0.1 0.72 0.54 -0.31 0.49
1.64 0.29 -1.87 -1.21 -1.57 -1.95 0.76 -0.2 0.17 0.12 0.64 -0.08 -0.07 -0.68 -1.18 0.08
0.23 0.2 -0.46 0.27 0.36 0.11 0.66 -0.2 0.31 0.32 0.14 0.02 -0.38 -0.92 -1.59 -0.52
0.63 -0.84 -1.08 -0.91 -0.91 -0.84 0.88 -0.47 0.03 0.27 0.56 0.3 0.22 0.23 -0.29 0.22
-0.8 0.53 -1.77 -1.23 -0.43 0.23 -1.2 -1.32 -1.06 0.0 -2.36 -0.88 1.51 0.91 0.19 1.27
0.03 0.1 -4.59 -4.34 -4.11 -3.55 -1.49 1.55 1.63 2.17 -1.25 -1.46 -1.04 -1.38 -0.92 -0.71
-0.5 -0.83 -2.89 -2.1 -1.98 -2.02 0.99 0.49 0.13 -0.28 0.36 -1.02 0.96 0.56 0.22 1.13
0.3 -0.77 -2.52 -2.74 -2.22 -1.5 -0.02 0.2 -0.27 -0.23 0.67 -1.27 1.53 0.65 -0.05 1.03
-0.21 1.4 -2.18 -3.35 -0.4 -1.65 0.35 1.84 1.49 0.02 -1.43 -0.54 -1.06 -1.81 -2.96 -1.14
-0.63 0.75 -0.81 -0.5 -1.47 -0.67 0.7 0.24 0.59 0.13 0.14 0.31 0.2 -0.02 -0.94 0.0
-0.34 -0.89 -1.44 -1.57 -0.8 -0.66 0.8 -0.75 -1.46 -1.21 1.03 0.5 0.81 0.72 0.19 0.7
-1.07 0.2 -0.52 -0.48 0.56 -0.18 0.59 -0.44 -1.14 -1.42 0.47 0.03 0.97 0.44 -1.45 0.54
-3.54 -2.42 -1.26 -1.9 -0.57 0.56 0.92 0.41 -5.36 -5.3 -0.41 -0.65 1.71 0.84 -1.23 1.46
-1.4 -1.44 -0.4 0.19 -0.1 0.57 1.22 -0.05 -0.93 -1.27 1.08 0.07 0.08 -0.01 -1.47 0.17
-1.29 2.5 -2.09 -0.78 -2.4 -0.16 -1.38 0.58 0.94 0.42 -1.44 -2.22 -0.51 -1.01 -1.83 -0.28
-2.72 0.98 -4.34 - -5.79 - -1.89 -2.29 0.63 0.64 -3.0 -5.36 1.99 0.8 -0.23 1.82
0.13 1.37 -2.9 -3.7 -2.52 -2.59 -2.38 -0.51 -0.66 -0.3 -0.74 -2.48 1.71 0.87 -0.47 1.5
-1.84 -3.18 0.82 0.88 0.7 0.38 0.45 -0.53 -0.78 -0.64 1.23 0.62 -0.99 -1.28 -1.51 -0.64
-2.08 -1.12 -3.24 -2.72 -2.26 -1.25 0.64 1.39 2.11 1.62 0.44 -0.79 -1.77 -2.12 -2.72 -2.04
-0.14 -2.21 -1.37 -1.54 -0.46 -0.86 0.11 -0.47 -0.32 -0.7 0.83 -0.47 1.24 0.43 0.17 1.21
-1.63 -2.01 -1.29 -1.22 -2.94 -2.59 -3.41 0.7 1.63 1.86 -1.64 -1.31 0.69 0.41 -0.43 0.53
-0.83 0.11 -0.74 -0.62 -0.37 -0.08 1.37 0.15 0.56 0.12 0.7 -0.12 -0.36 -0.85 -1.12 -0.36
-1.78 -2.82 -3.72 -3.1 -2.97 -2.26 -1.29 1.07 2.03 2.7 -0.95 -1.56 -1.69 -2.15 -2.99 -1.35
0.45 0.0 -0.17 -0.06 0.43 0.18 0.37 -0.31 -0.34 -1.71 -0.2 -1.66 0.79 0.09 -0.33 0.41
0.12 -1.0 -1.32 -1.32 -0.12 0.02 0.7 0.38 -3.39 -5.25 -0.64 -1.63 1.5 0.93 -0.41 1.12
-1.85 -5.6 -0.22 0.31 -0.73 -1.47 -2.51 -1.22 0.28 -0.22 0.26 0.64 1.03 0.19 -0.06 1.61
-0.19 -1.44 -3.47 -5.01 -2.9 -3.0 -1.56 0.38 1.89 2.41 -2.2 -2.22 0.23 -0.2 -1.05 -0.39
-0.64 -0.77 -0.57 -0.66 -0.97 -0.64 -2.86 -1.9 -5.47 -3.42 -2.21 -2.9 1.94 1.61 1.31 1.05
-1.85 -2.76 -0.06 -1.07 1.84 -0.43 2.86 -1.82 -7.07 -5.59 -1.1 -0.44 -1.32 -2.38 -3.26 -1.6
0.5 -1.14 0.53 0.85 0.66 0.58 0.23 -0.78 -0.36 -0.28 0.85 0.22 -1.24 -1.44 -2.3 -1.01
-1.34 -3.1 -0.19 0.18 0.84 1.03 1.33 0.8 -4.3 -4.64 1.3 0.91 -1.96 -2.13 -2.28 -1.98
-6.48 -6.26 -2.7 -2.98 -1.11 -1.57 0.58 0.35 -0.27 -1.73 0.29 -1.6 1.56 1.01 0.82 1.44
0.62 0.08 -0.87 -2.71 -0.04 0.17 0.24 -0.58 -1.21 -2.15 -0.7 -1.16 1.22 0.91 0.53 0.47
0.72 -0.31 -0.53 -0.19 0.08 -0.29 0.7 0.47 -0.02 -0.05 0.39 -0.18 -0.5 -0.41 -1.16 0.07
-0.73 -0.89 -1.76 -1.82 -0.43 -0.25 0.84 0.25 0.13 0.0 0.43 0.09 0.87 0.16 -0.36 0.58
-0.75 -1.56 -1.84 -0.94 -1.57 -0.72 -0.57 1.06 2.0 1.88 -1.09 -1.41 -0.94 -1.0 -1.11 -0.84
0.04 0.51 -2.99 -2.33 -1.17 -0.93 0.33 -1.43 0.07 -0.53 -0.84 -0.4 1.5 1.03 -2.11 1.31
0.13 -1.4 0.24 0.65 -0.09 -0.15 0.52 -0.5 0.22 0.24 0.98 -0.04 -0.23 -0.94 -1.32 -0.46
-0.65 -1.22 -1.69 -2.2 -2.42 -1.08 1.32 0.75 0.13 -1.05 -0.4 -0.48 0.77 0.62 0.42 0.95
-0.14 -0.52 -2.27 -2.0 -2.21 -1.64 0.78 0.89 1.03 1.08 -0.1 -1.02 0.38 -0.13 -0.97 0.61
1.38 0.21 -2.18 -1.86 -0.6 -1.79 -0.13 0.41 1.05 0.87 0.4 -0.65 -1.7 -0.81 -0.6 0.21
-1.29 -2.96 -3.37 -1.88 0.93 0.09 2.08 -0.32 -1.58 -1.27 0.36 -0.24 0.5 0.0 -0.91 0.33
0.4 -0.48 -1.47 -0.93 -0.2 -1.36 0.63 -0.02 0.04 0.08 0.86 0.63 0.33 -0.38 -0.61 0.2
1.18 -0.1 -1.74 -1.62 -1.06 -0.81 0.68 0.24 -0.35 -0.38 0.42 -0.81 0.54 0.22 -0.3 0.53
-1.46 -2.21 -1.09 -0.11 -0.71 -0.18 1.27 -0.3 0.58 0.91 1.44 0.55 -0.86 -1.21 -2.27 -0.83
-7.1 -6.06 0.3 0.98 -0.25 0.1 0.17 -0.1 1.1 1.22 1.43 0.33 -2.72 -3.18 -6.29 -3.26
-0.07 -1.24 -1.19 -0.8 -0.33 -0.14 0.79 -0.19 0.25 1.02 0.88 0.22 -0.3 -0.29 -0.89 -0.16
-1.32 -1.14 0.31 0.54 -0.44 -0.08 1.0 0.05 0.4 0.2 1.07 0.49 -0.96 -1.68 -1.64 -0.7
-0.69 -0.23 -0.27 0.09 0.21 -0.24 0.81 0.61 -0.02 0.08 0.1 -0.23 -0.21 -0.09 -0.51 -0.2
-1.06 1.33 -0.49 -0.82 -1.22 -1.77 0.65 -0.0 -2.25 -2.63 -1.48 -1.26 1.26 0.95 0.31 0.78
- - 0.74 1.16 0.82 0.63 0.29 -1.12 -1.55 -0.47 1.45 -0.19 -0.39 -0.53 -1.64 -0.65
-0.2 -1.93 0.27 -0.28 0.88 1.04 -0.01 -1.01 -0.84 -1.23 0.2 -1.16 1.13 -0.29 -0.22 0.01
-0.2 0.16 -1.57 -1.81 -0.03 0.03 0.16 -0.46 -0.11 -0.22 0.25 -0.78 0.93 0.43 -0.13 0.86
3.82 -2.52 -2.94 -2.51 -3.66 -2.48 -4.33 -4.4 -5.6 -5.31 -6.09 -7.19 -2.44 -2.43 -2.86 -1.25
-1.36 -1.69 -2.64 -2.85 -2.87 -1.94 -4.0 2.92 1.47 1.5 -3.23 -3.38 -1.75 -1.58 -2.02 -1.94
-1.79 -2.46 0.09 0.65 -0.38 0.83 1.02 -0.1 1.23 0.65 0.87 -0.0 -2.41 -2.71 -2.89 -2.63
-1.83 0.36 0.04 0.55 1.45 0.07 -0.34 -1.96 0.21 0.85 0.86 0.18 -1.52 -1.96 -2.16 -1.42
-0.47 -3.03 -3.09 -2.2 -3.11 -2.44 -1.15 1.54 1.67 1.67 -1.26 -2.06 0.53 -0.04 -1.23 0.36
- - - -5.53 - - 2.34 1.65 -4.47 - - - 1.52 -0.01 -0.89 1.74
3.09 1.77 -3.37 -3.21 -2.28 -2.0 -1.4 -2.64 -1.93 -2.01 -0.24 -2.54 -0.89 -1.71 -3.19 -1.34
1.92 0.72 -2.35 -1.53 -2.12 -2.29 -1.83 -0.98 -1.16 -0.82 0.79 -0.74 0.52 0.18 -0.78 1.21
-0.91 -1.61 -0.46 -0.35 -0.11 0.12 1.08 -0.38 0.21 0.46 1.19 0.51 -0.29 -0.74 -1.54 -0.45
0.38 -0.92 -1.23 -1.17 -0.9 -0.8 0.31 0.5 0.86 1.06 0.14 -0.6 0.16 0.12 -0.57 0.02
-3.52 -5.3 0.52 0.58 0.56 0.94 -0.31 -3.04 -1.97 -1.61 1.82 1.76 -1.69 -1.85 -2.22 -1.6
-0.02 0.03 -0.65 -0.71 -0.53 -0.23 0.48 -0.04 0.69 0.65 0.83 0.02 -0.32 -0.51 -1.63 0.05
1.03 -0.2 -0.83 -1.04 -0.08 -0.3 0.72 -0.19 -6.05 -6.21 -0.61 0.0 0.98 0.65 -0.22 0.75

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.