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Heatmap: Cluster_51 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.73 -1.75 -1.95 -1.53 -1.39 -1.06 -0.35 1.7 1.36 1.86 0.51 0.05 -1.49 -1.62 -2.6 -1.37
0.68 -0.64 -1.07 -1.65 -0.75 -0.51 -0.5 -1.43 -1.02 -0.22 -0.1 -0.39 0.86 0.75 0.84 1.17
-0.65 -0.86 -0.71 -0.47 0.93 0.22 0.04 -0.41 -0.06 0.01 -0.15 -0.38 0.38 0.37 0.16 0.35
0.72 -0.25 -0.3 0.13 -0.64 -0.71 -0.02 -0.8 -0.31 -0.1 0.02 -0.32 0.43 0.36 0.11 0.6
-0.11 -6.1 -3.2 -3.27 -1.57 -3.95 -2.79 -2.48 -7.74 -8.26 -3.85 -2.33 1.75 1.4 1.92 2.02
0.65 -2.96 0.17 -1.11 -0.4 -0.52 0.41 -1.06 0.03 0.22 -0.01 0.41 0.21 0.26 0.25 0.48
0.17 -1.67 -0.31 0.05 0.19 -0.76 1.09 0.35 -0.75 -0.67 0.16 -0.99 0.61 0.16 -0.78 0.59
0.89 -0.12 -1.33 -2.24 -0.68 -0.34 -0.56 -1.29 0.0 0.3 -0.62 -1.11 0.8 0.76 0.69 0.78
0.17 -1.18 -0.22 -1.28 -0.26 -0.46 0.42 -1.4 -1.5 -1.22 0.73 0.7 0.48 0.51 0.52 0.65
0.1 -1.02 -2.24 -2.07 -2.31 -2.81 -0.17 -0.09 0.98 0.73 0.44 0.51 0.49 0.27 -0.03 0.84
-0.48 -1.47 -2.29 -1.82 -1.03 -1.47 1.04 0.34 0.23 -0.71 -0.14 -0.33 0.96 0.63 0.17 1.11
0.15 0.06 -0.31 0.02 0.42 0.32 -0.11 -0.68 0.08 -0.3 0.71 0.05 0.03 -0.26 -1.61 0.21
1.13 -0.04 -0.76 -1.09 -0.89 -0.39 -0.58 -0.3 0.96 1.04 -0.5 -0.15 -0.58 -0.43 -0.09 0.05
-0.62 -1.53 0.06 0.42 0.48 0.61 -0.07 -0.18 -0.0 0.07 0.09 -0.24 0.19 -0.27 -0.68 0.4
-0.55 -0.85 -1.01 -0.42 -1.29 -0.57 0.62 -0.49 0.16 0.54 0.67 -0.05 0.67 0.15 -0.33 0.64
-1.06 -0.57 -0.99 -0.72 0.17 -0.14 0.07 -0.52 0.61 0.86 0.82 1.34 -0.5 -1.01 -1.2 -0.56
-1.39 -2.14 -3.58 -3.71 0.25 1.98 -2.29 -1.99 -1.34 -1.83 1.56 1.14 0.4 -0.7 -0.27 0.09
-0.35 -1.25 -0.34 -0.5 0.46 0.95 -0.15 -0.78 -0.96 -0.63 0.01 -0.16 0.34 0.45 0.31 0.64
0.58 0.72 -0.61 -0.63 -0.36 -0.46 -0.14 -0.52 0.7 0.34 0.0 0.66 -0.49 -0.51 -0.54 -0.22
-1.75 -0.5 -1.76 -1.05 -0.84 -0.38 0.8 0.84 0.06 0.66 1.39 1.03 -0.78 -0.98 -1.35 -0.71
-0.39 -0.17 -0.5 -0.43 -0.25 -0.18 0.05 -1.36 -0.11 0.7 0.44 0.1 0.2 0.17 -0.03 0.6
0.12 -1.08 -3.25 -3.16 -2.21 -1.73 -0.34 -0.52 -1.02 -0.14 0.43 0.44 1.24 0.91 0.42 1.34
0.82 -0.73 -0.53 0.37 -0.71 -0.48 -1.2 -0.9 1.72 1.05 -0.67 -0.99 -0.46 -0.68 -0.4 -0.42
1.13 -0.11 -1.25 -1.7 -1.79 -1.56 -0.28 -1.54 -1.24 -0.8 -0.24 -0.43 0.89 0.83 0.98 1.11
-1.38 1.15 -0.74 -0.44 -0.81 0.25 0.35 -1.46 0.37 0.41 1.1 1.23 -1.38 -1.55 -1.45 -1.13
-0.04 -0.61 -0.97 -0.78 -0.73 -0.64 0.75 -0.09 -0.11 -0.22 0.71 0.41 0.52 0.22 -0.57 0.47
0.25 -0.24 -0.88 -0.58 -0.01 -0.15 0.21 -0.19 0.09 -0.15 0.15 -0.09 0.14 0.31 0.19 0.41
0.1 -1.0 -1.22 -1.27 -0.33 -0.35 0.04 -1.07 0.19 0.99 0.68 0.11 0.29 -0.51 -0.42 1.01
0.91 -0.33 -1.35 -0.68 -0.75 -0.59 -0.14 -0.96 0.05 -0.24 0.77 0.42 0.18 0.25 -0.21 0.6
1.0 0.37 -0.66 0.01 -0.54 -0.53 -0.7 -1.18 0.41 0.48 -0.16 0.07 -0.21 -0.18 -0.28 0.47
-0.07 -3.86 -1.87 -2.25 -2.22 -1.17 -1.66 0.29 -6.83 - -3.32 -3.51 1.81 1.47 1.2 1.82
0.07 -1.73 -1.44 -1.81 0.31 -0.89 -1.08 -1.6 0.52 -1.81 -1.11 -1.2 1.42 0.8 -0.03 1.76
-0.15 -2.38 -0.81 -1.41 -0.52 -0.09 -0.02 -1.49 -1.16 -0.15 0.54 -0.39 0.86 0.84 0.69 1.14
0.21 -0.06 -0.32 -1.23 -0.08 -0.03 -0.48 -1.49 -0.1 0.48 0.19 0.09 0.48 0.19 -0.06 0.7
-6.5 -6.27 - - - - - - - - - - 2.7 1.89 0.35 2.16
-0.92 0.21 -1.84 -1.58 -1.42 -1.28 0.84 0.44 1.09 1.42 0.72 0.53 -1.18 -1.47 -1.45 -0.5
-0.37 -0.82 -0.29 0.22 -0.16 0.15 0.45 -0.08 0.11 0.37 0.53 -0.04 0.06 -0.27 -0.67 0.12
-2.04 -2.24 -3.13 -2.92 -2.73 -3.26 -2.92 -2.71 - - -6.5 -8.19 1.82 1.97 1.94 1.79
0.1 -1.69 -0.89 -0.39 0.43 0.18 1.47 -0.98 -0.74 -0.38 1.15 1.32 -1.66 -1.19 -1.51 -1.36
-0.89 -1.1 -0.65 -0.01 -0.58 -0.23 -0.54 0.19 1.0 1.35 0.55 0.19 -0.53 -0.49 -0.88 -0.14
-4.31 -0.89 - - -4.4 -4.58 -1.51 -2.33 0.2 -0.11 -3.88 -2.4 1.63 1.04 1.16 2.34
0.63 0.43 -0.03 0.28 -0.08 0.63 -0.47 -0.24 -0.09 -0.41 -1.07 -0.78 0.01 -0.03 0.38 -0.29
1.09 0.76 -1.31 -1.76 -0.36 -1.06 1.41 -0.68 -1.99 -1.7 0.62 -0.02 -0.11 0.03 -0.09 -0.03
-0.34 -0.33 -0.69 -0.16 -0.4 -0.06 0.54 -0.25 0.79 1.06 0.46 -0.37 -0.39 -0.76 -1.17 0.17
0.67 1.42 -0.49 -0.79 -0.37 -0.34 -0.04 -0.77 -2.06 -2.92 -1.64 -1.05 0.58 0.83 0.48 0.55
-1.05 -1.94 -2.01 -2.6 -1.28 -0.8 -1.49 -0.38 1.82 2.03 -0.08 -0.23 0.17 -0.61 -0.94 0.04
0.12 -0.5 -2.59 -2.03 -2.3 -1.27 0.58 0.19 -1.67 -0.74 0.35 0.24 1.58 1.01 -0.4 0.5
0.2 -0.02 -0.41 -0.11 -0.23 -0.41 0.26 -0.43 0.24 0.2 0.79 0.92 -0.53 -0.75 -0.83 -0.27
1.36 -2.62 -1.45 -2.92 -3.12 -2.42 -1.53 -0.86 -4.1 -1.72 -0.64 -1.7 1.89 1.29 0.22 1.56
1.36 -2.62 -1.45 -2.92 -3.12 -2.42 -1.53 -0.86 -4.1 -1.72 -0.64 -1.7 1.89 1.29 0.22 1.56
3.29 -0.72 -6.18 -7.65 -1.24 -0.97 -1.49 -2.63 -2.48 -2.55 -1.81 -2.75 -0.21 -0.04 -0.42 -0.31
-0.61 -7.5 - - -6.83 -5.0 - -4.06 - - - - 2.07 1.73 1.73 2.14
0.44 -6.82 -2.95 -3.72 -0.76 -2.13 0.15 -1.05 - - -2.06 -0.86 1.53 1.45 1.01 1.84
-1.99 -1.93 -1.08 -1.19 -0.53 0.09 -0.85 -1.3 -0.72 -1.1 -0.3 0.35 1.46 0.89 0.32 1.51
-0.56 -0.07 -1.52 -1.84 -0.99 -0.83 0.15 -0.21 1.51 1.81 -0.35 0.23 -0.78 -0.77 -1.05 -0.44
0.67 -0.1 -1.4 -1.67 -1.11 -0.88 -0.44 -1.11 -0.6 -0.46 -0.32 -0.28 0.86 0.65 0.96 1.16
-0.28 -0.61 -1.12 -0.61 -0.61 -0.85 0.53 -0.16 0.61 0.13 0.12 -0.37 0.76 0.19 -0.18 0.73
0.81 -0.3 -0.66 -1.74 -1.13 -0.39 -0.09 -1.61 -0.81 0.14 0.26 -0.4 0.63 0.7 0.53 0.82
1.27 -0.02 -0.4 -0.97 0.08 0.13 0.37 0.29 -0.36 -0.62 -0.51 -0.04 -0.28 -0.16 -0.09 -0.14
0.2 0.1 -0.02 0.08 -0.18 0.08 0.1 -0.88 0.08 0.33 0.36 0.23 -0.24 -0.26 -0.28 -0.15
1.18 0.61 -0.62 -0.21 -0.21 -0.28 0.27 -0.44 -0.17 -0.88 0.39 0.61 -0.7 -0.86 -0.46 -0.15
-5.6 -4.42 -3.43 - - - 0.04 0.18 -1.13 -1.32 -1.02 -3.25 2.25 1.44 -0.26 1.97
0.9 0.04 -2.02 -2.41 -2.69 -2.24 -1.63 -1.98 -3.33 -2.22 -0.63 -0.95 1.41 1.06 1.12 1.74
-0.16 -0.16 -0.63 -0.02 -0.24 -0.33 0.02 -0.77 0.48 0.62 0.42 0.69 -0.25 -0.65 -0.44 0.3
0.04 -0.1 -0.42 0.05 -0.03 -0.3 0.18 -0.74 0.26 0.58 0.59 0.77 -0.4 -0.94 -0.78 -0.05
0.67 1.37 1.06 0.48 -0.08 -0.28 0.34 0.03 0.35 -0.13 -0.77 -1.35 -2.23 -2.61 -2.78 -0.75
0.6 -1.18 -0.38 -0.13 -0.21 0.05 0.19 -0.42 0.82 0.93 0.74 -0.11 -0.58 -1.22 -1.43 -0.27
0.54 0.11 -0.59 -0.27 -0.07 0.01 -0.18 -1.34 -0.51 -0.31 0.31 0.56 0.08 0.27 -0.09 0.39
-0.08 1.03 -0.4 -0.05 0.05 -1.02 -0.71 0.59 0.18 0.47 -0.2 0.05 -0.1 -0.59 -1.24 0.26
-0.11 -0.97 -0.36 -0.68 -0.09 0.18 -0.4 -1.47 -0.16 0.47 1.18 0.86 -0.31 -0.33 -0.16 0.14
-1.47 -1.83 0.28 0.42 0.58 0.67 0.96 -1.7 -0.5 0.18 0.58 0.02 -0.46 -0.47 -0.57 -0.01
0.8 0.83 -1.01 -0.75 -0.91 -0.52 0.53 -0.58 0.15 0.13 0.56 0.54 -0.5 -0.57 -0.55 -0.22
-0.4 -0.32 -1.21 -0.9 -0.6 -0.51 0.61 0.14 0.21 0.14 0.68 0.47 0.27 0.06 -0.34 0.26
-0.51 -1.24 -0.23 -0.07 -0.4 0.18 0.11 -0.83 -0.19 -0.02 0.95 0.97 -0.21 -0.06 -0.11 0.04
-0.87 -2.4 -0.86 -0.25 0.3 0.41 -0.17 -0.59 0.49 0.77 -0.48 -0.15 0.5 0.32 -0.19 0.58
0.65 -0.54 0.51 0.22 -1.27 -0.24 -0.92 -1.78 -0.11 1.05 0.71 0.9 -0.8 -0.75 -0.65 -0.37
-0.21 0.99 0.07 0.65 0.33 0.79 0.37 -1.22 -1.12 -0.79 0.18 0.99 -1.27 -1.58 -1.81 -0.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.