Heatmap: Cluster_512 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-1.25 2.24 - - 0.26 -0.48 0.46 -1.52 - - - - 1.46 0.95 - 1.34
-4.84 -5.34 -1.72 -1.44 -1.01 -1.94 -0.26 0.73 -0.35 -0.19 -0.49 0.13 1.58 0.74 0.75 1.15
1.15 0.36 0.02 -0.69 -0.04 -0.51 -0.25 0.2 0.68 0.5 -0.1 -0.34 -0.52 -0.63 -1.24 -0.56
-1.73 0.12 0.39 0.65 -0.3 -0.41 0.11 1.68 -0.26 -0.86 -1.25 -2.2 0.64 -0.45 - 0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.