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Heatmap: Cluster_283 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
- - - - - - - - - - - - - - - -
- - 0.96 0.11 2.35 2.8 -0.55 - -3.19 - -3.08 - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - 4.0 - - - - - - -
- 0.4 - - 1.23 0.1 3.39 -0.41 - - - - - - - -
2.36 2.87 -1.92 - - - -1.27 -3.58 0.66 0.3 - - - - - -
- 2.64 - - 3.28 - - - - - - - - - - -
- - - - - - - - - - 4.0 - - - - -
-8.27 -10.63 2.24 2.53 -1.12 -1.26 -2.66 -4.36 -1.32 0.07 1.16 -0.42 - - - -
- 4.0 - - - - - - - - - - - - - -
- 3.67 - - 1.71 - - - - - - - - - - -
- - - 1.3 1.07 3.52 - - - - - - - - - -
- - -0.46 0.67 0.37 0.19 0.82 -4.04 -3.19 -3.13 2.33 2.06 - - - -
- -0.02 - - - - - 3.91 - - - - - - - -
- - - - - - - - - - 3.08 2.91 - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
3.39 2.46 - - - - - - - - - - - - - -
- - 0.16 2.48 1.62 2.53 -2.22 - - - -2.83 -2.94 - - - -
- - 1.39 - 1.47 - 1.23 - 0.99 - 2.1 0.99 - - - -
2.25 - - - - 3.49 - - - - - - - - - -
- - - - - - - - - 2.98 3.02 - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - 1.15 3.27 - - 0.48 - 1.45 - - - - - -
- 4.0 - - - - - - - - - - - - - -
- 0.84 - - 0.94 2.69 0.69 - - - 0.57 1.45 - - - -
- - 3.86 0.53 - - - - - - - - - - - -
- - - - - - - - - - - - - - - -
- - - 1.65 - - - 2.42 2.91 - - - - - - -
- 1.47 -1.21 - -0.11 - 1.69 1.56 - -0.53 2.32 - - - - -
- - - - - 4.0 - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.