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Heatmap: Cluster_68 (Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
stage A1 (Dhaka et al., 2020)
stage A3 (Dhaka et al., 2020)
M-81E strain-control (Sun et al., 2020)
M-81E strain-salt (Sun et al., 2020)
Roma strain-control (Sun et al., 2020)
Roma strain-salt (Sun et al., 2020)
root (Murray et al., 2022)
shoot system (Murray et al., 2022)
119 days old-Postflowering drought stress (Varoquaux et al., 2019)
84 days old-control (Varoquaux et al., 2019)
84 days old-Preflowering drought stress (Varoquaux et al., 2019)
35 days old-control (Varoquaux et al., 2019)
Dev Stage 3 (Leiboff et al., 2019)
Dev Stage 2 (Leiboff et al., 2019)
Dev Stage 1 (Leiboff et al., 2019)
Dev Stage 4 (Leiboff et al., 2019)
-0.7 -1.35 -0.25 0.29 0.51 1.04 0.05 -0.83 -0.1 0.23 0.85 0.17 -0.01 -0.82 -0.83 -0.54
-8.78 -6.35 1.08 1.14 1.23 1.18 1.84 -4.34 -5.4 -5.49 0.78 0.58 -3.95 -4.9 -5.36 -4.24
-0.39 -1.79 0.93 1.38 0.33 0.87 -0.65 -0.7 -0.64 -0.53 0.34 -0.38 0.14 -0.88 -1.17 -0.66
-0.42 -1.86 0.5 1.03 0.89 0.79 0.14 -0.61 -1.27 -0.56 0.57 0.34 -0.13 -1.08 -1.61 -0.7
-0.47 -1.48 -0.24 0.27 0.27 1.05 -0.25 -0.66 -0.58 0.23 0.85 0.07 0.44 -0.68 -0.92 -0.13
-0.59 -1.76 0.93 1.3 0.6 0.67 -0.09 -0.13 -0.79 -0.45 0.75 0.19 -0.77 -1.54 -2.04 -1.33
-1.1 -1.45 0.4 0.9 0.55 0.77 -0.26 -0.55 -0.7 -0.28 0.89 0.5 -0.02 -1.0 -1.08 -0.65
-0.14 -1.68 -0.16 -0.26 0.34 0.54 -0.4 -0.71 -0.1 -0.36 0.31 0.18 0.88 -0.06 0.09 0.03
-0.73 -2.81 0.46 0.91 0.69 1.16 -0.24 -0.56 -0.61 0.16 0.49 -0.25 0.11 -0.79 -1.53 -0.7
0.11 -1.7 -2.14 -1.17 -2.16 0.43 -0.6 -0.61 -1.73 -1.57 0.08 0.38 1.31 0.72 0.82 1.12
-1.07 -1.64 0.78 0.96 0.75 1.17 -0.69 -1.06 -0.61 -0.07 0.89 0.18 -0.28 -1.46 -1.88 -1.14
-6.92 -4.66 -1.58 -0.98 0.35 0.06 1.37 -1.0 -4.6 - -2.19 0.29 2.0 0.47 -1.27 1.28
-0.9 -2.39 0.88 1.24 0.49 0.67 0.4 0.6 -0.89 -0.32 0.35 -0.33 -0.2 -1.61 -1.95 -1.35
0.62 -1.71 -0.81 -0.43 -0.27 0.35 -0.02 -0.8 -0.89 -0.35 0.63 -0.07 1.02 0.07 -0.14 0.46
-0.7 -1.89 0.31 0.53 0.49 0.85 0.49 0.01 -0.7 0.18 0.8 -0.23 0.1 -1.11 -1.81 -0.62
-0.79 -1.07 0.84 1.1 1.18 0.86 -1.37 -1.74 -1.77 -1.01 0.8 0.71 -0.4 -1.25 -1.36 -0.96
-0.61 -1.79 1.23 -0.18 1.11 -0.03 -0.64 0.59 0.2 0.31 -0.07 -0.47 -0.44 -0.86 -0.7 -0.8
-2.29 -5.76 2.96 0.42 -0.57 -0.72 -0.72 -0.19 -1.94 -1.48 -1.24 -1.52 0.31 -0.9 -2.65 -0.79
-6.6 - 1.08 1.2 1.4 1.46 -3.01 -3.3 -3.17 -2.56 0.45 -0.16 0.62 -0.78 -1.73 -0.02
-2.24 -3.12 -0.56 -0.57 -0.15 0.38 1.44 -0.44 0.27 0.31 1.38 0.48 -0.76 -0.91 -1.11 -0.65
-1.27 -1.77 0.71 1.0 0.73 0.76 0.3 0.24 -0.61 -0.67 0.57 -0.1 -0.19 -1.27 -1.45 -0.89
0.1 -1.54 -0.45 0.04 -0.27 0.63 -0.46 -0.53 -0.97 -0.55 1.16 0.02 0.83 -0.12 -0.52 0.24
-0.87 -1.35 1.09 1.38 0.89 0.8 -0.6 -0.72 -0.39 0.19 0.69 -0.58 -1.29 -1.7 -2.29 -1.57
-0.51 -2.89 0.43 0.74 0.53 0.92 0.37 -0.17 -0.56 -0.11 0.88 -0.14 -0.07 -1.04 -1.61 -0.95
-0.19 -1.1 0.44 0.68 0.81 0.49 -0.26 -0.62 0.05 0.37 0.29 -0.11 -0.36 -0.98 -0.69 -0.58
-0.85 -2.11 0.81 1.01 1.31 1.45 -0.31 -0.7 -0.4 -0.32 0.52 -0.77 -0.93 -2.07 -3.52 -1.33
- - - - - - -5.07 -5.47 - - - - 3.07 1.81 0.49 1.39
-1.24 -1.82 -0.03 -0.09 0.65 0.7 0.49 0.13 -1.39 -1.32 -0.02 -0.82 1.49 -0.25 -0.85 0.19
-7.4 -4.82 -2.23 -3.1 1.27 -0.95 -5.1 0.61 1.73 2.01 0.35 -0.51 0.28 -1.83 -3.76 -1.92
-1.36 -2.22 -1.22 -0.68 -0.1 1.73 -4.38 -2.76 -2.64 -2.16 1.0 0.91 1.12 0.27 -0.15 0.44
-2.43 -5.64 0.87 1.35 1.02 1.37 -0.08 -0.82 -2.46 -1.71 0.02 -1.05 0.65 -0.63 -1.93 -0.27
-1.4 -2.99 1.48 1.52 1.11 1.3 -0.96 -1.36 -1.37 -0.68 0.42 -0.16 -1.22 -2.31 -2.61 -1.94
-0.68 -1.75 0.2 0.58 -0.17 0.39 -0.26 -0.37 0.6 0.5 1.05 0.6 -0.3 -1.15 -1.69 -0.92
-1.94 -3.04 0.88 1.18 -0.28 0.29 -0.12 -0.37 -0.45 -0.08 0.43 0.41 0.47 -0.76 -1.22 0.01
-1.33 -1.76 0.78 1.09 0.9 1.32 -0.79 -1.58 -1.08 -0.41 1.01 0.23 -0.48 -1.39 -2.01 -1.23
-1.8 -3.21 0.43 0.17 0.81 1.39 -0.28 -0.17 -2.61 -2.41 -0.55 -1.28 1.48 -0.38 -0.85 0.58
-3.99 -8.69 -0.17 0.36 0.49 -0.12 -0.61 -0.59 -2.31 -2.22 -1.16 -2.91 2.23 0.15 -0.69 1.43
-1.47 -4.19 -2.39 -1.5 -0.64 -1.17 0.5 0.07 0.09 0.93 1.29 0.28 1.01 0.14 -0.78 0.2
-4.69 -4.03 0.02 -0.4 -2.84 -2.96 -1.31 -2.18 1.85 2.65 1.22 -0.28 -3.22 -4.73 -6.01 -4.38
-1.51 -1.56 -0.98 -1.05 -0.23 -0.02 -0.1 -0.9 0.3 1.03 0.68 0.63 0.33 0.12 0.06 0.25
-0.93 -1.43 0.83 1.13 0.65 1.05 -0.41 -1.01 -0.92 -0.39 0.73 0.05 -0.14 -1.05 -1.52 -0.92
-0.24 -2.49 -1.56 -3.48 -1.02 0.45 1.13 1.11 -5.65 - -5.55 - 2.28 0.45 -0.93 0.64
-0.1 -1.11 0.64 0.83 0.61 0.36 0.16 -0.59 -0.16 0.19 0.41 0.26 -0.64 -1.22 -1.03 -0.85
-4.19 -1.71 -5.99 -8.83 -7.02 -8.2 -3.29 -1.75 -3.17 -2.56 -4.7 -3.48 2.05 1.45 1.88 2.08
0.61 -1.17 -1.06 -0.94 -0.43 -0.03 -0.75 -0.67 -1.69 -1.17 -0.08 -0.23 1.17 0.81 0.6 1.01
-4.44 -5.63 0.89 1.62 1.17 1.35 -1.54 -2.82 -1.54 -0.94 0.75 0.07 -0.19 -1.21 -2.04 -0.82
- - - - - - - -3.71 -3.77 -2.71 - -3.78 3.17 0.72 0.11 1.96
0.33 -1.38 -0.17 0.45 0.39 0.85 0.27 -0.55 -1.06 -0.3 0.56 -0.38 0.58 -0.48 -0.98 -0.22
-2.16 -2.84 1.27 2.14 0.66 0.86 -4.64 -2.42 0.82 0.86 -0.54 -1.55 -1.7 -3.83 -4.57 -2.54
-0.06 -1.48 -1.17 -0.63 -0.13 0.18 0.4 -0.14 -0.48 0.5 1.31 0.3 0.52 -0.59 -1.75 0.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.