Bradi3g60762.2

Description : Transducin/WD40 repeat-like superfamily protein

Gene families : OG_01_0001939 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001939_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi3g60762.2
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_218

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	ISM	GOs from InterProScan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0042254	ribosome biogenesis	ISM	GOs from InterProScan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	318	672
IPR036322	WD40_repeat_dom_sf	SUPERFAMILY	329	670
IPR001680	WD40_rpt	Pfam	580	615
IPR001680	WD40_rpt	Pfam	330	366
IPR001680	WD40_rpt	Pfam	631	670
IPR019775	WD40_repeat_CS	ProSitePatterns	354	368
IPR001680	WD40_rpt	ProSiteProfiles	335	376
IPR012953	BOP1_N_dom	Pfam	72	328
IPR028598	BOP1/Erb1	PANTHER	17	671
IPR028598	BOP1/Erb1	Hamap	1	671
IPR012953	BOP1_N_dom	SMART	72	328
IPR001680	WD40_rpt	SMART	577	616
IPR001680	WD40_rpt	SMART	328	367
IPR001680	WD40_rpt	SMART	534	573
IPR001680	WD40_rpt	SMART	628	671
IPR001680	WD40_rpt	SMART	370	409

No CAZYmes available for this sequence

External Links

No external refs found!