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  5. Sevir.3G075500.1

Sevir.3G075500.1


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0012046 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012046_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G075500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_10


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 13 42
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 10 44
IPR011990 TPR-like_helical_dom_sf Gene3D 1 92
IPR002885 Pentatricopeptide_rpt TIGRFAM 49 84
IPR002885 Pentatricopeptide_rpt TIGRFAM 91 113
IPR002885 Pentatricopeptide_rpt TIGRFAM 114 147
IPR002885 Pentatricopeptide_rpt TIGRFAM 13 44
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 47 82
IPR002885 Pentatricopeptide_rpt Pfam 47 91
IPR002885 Pentatricopeptide_rpt Pfam 92 124
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 112 146
IPR011990 TPR-like_helical_dom_sf Gene3D 93 204

No CAZYmes available for this sequence

No external refs found!