- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : homologue of trithorax
Gene families : OG_01_0004191 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004191_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi4g08510.5 | |
| Cluster | Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_202 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| CC | GO:0005634 | nucleus | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR002219 | PE/DAG-bd | ProSiteProfiles | 559 | 615 |
| IPR034732 | EPHD | ProSiteProfiles | 626 | 754 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 570 | 621 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 623 | 756 |
| IPR003888 | FYrich_N | ProSiteProfiles | 408 | 467 |
| IPR003889 | FYrich_C | Pfam | 473 | 550 |
| IPR003889 | FYrich_C | SMART | 475 | 557 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 573 | 618 |
| IPR003888 | FYrich_N | Pfam | 414 | 464 |
| IPR003888 | FYrich_N | SMART | 423 | 467 |
| IPR041956 | ATX1/2_ePHD | CDD | 629 | 753 |
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 563 | 637 |
| IPR003616 | Post-SET_dom | SMART | 995 | 1011 |
| IPR003889 | FYrich_C | ProSiteProfiles | 471 | 554 |
| IPR042010 | ATX1/2_PHD | CDD | 573 | 618 |
| IPR001214 | SET_dom | ProSiteProfiles | 871 | 989 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 561 | 622 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 995 | 1011 |
| IPR001214 | SET_dom | SMART | 871 | 995 |
| IPR002999 | Tudor | SMART | 176 | 234 |
| IPR000313 | PWWP_dom | SMART | 270 | 333 |
| IPR001965 | Znf_PHD | SMART | 688 | 754 |
| IPR001965 | Znf_PHD | SMART | 572 | 619 |
| IPR000313 | PWWP_dom | Pfam | 273 | 358 |
| IPR000313 | PWWP_dom | ProSiteProfiles | 272 | 335 |
| IPR001214 | SET_dom | Pfam | 882 | 988 |
No CAZYmes available for this sequence
| No external refs found! |