Description : histone acetyltransferase of the CBP family 1
Gene families : OG_01_0004468 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004468_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G091700.1 | |
Neighborhood | Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G091700.1 | |
Cluster | Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92 | |
Cluster | Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_7 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004402 | histone acetyltransferase activity | ISM | GOs from InterProScan |
BP | GO:0006355 | regulation of DNA-templated transcription | ISM | GOs from InterProScan |
MF | GO:0008270 | zinc ion binding | ISM | GOs from InterProScan |
BP | GO:0016573 | histone acetylation | ISM | GOs from InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Source | Start | Stop |
---|---|---|---|---|
IPR000433 | Znf_ZZ | Pfam | 1548 | 1588 |
IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 1043 | 1091 |
IPR000197 | Znf_TAZ | SMART | 1608 | 1686 |
IPR000197 | Znf_TAZ | SMART | 664 | 742 |
IPR031162 | CBP_P300_HAT | ProSiteProfiles | 1108 | 1544 |
IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 1019 | 1090 |
IPR000433 | Znf_ZZ | SMART | 1425 | 1469 |
IPR000433 | Znf_ZZ | SMART | 1545 | 1590 |
IPR000197 | Znf_TAZ | ProSiteProfiles | 1604 | 1688 |
IPR035898 | TAZ_dom_sf | SUPERFAMILY | 666 | 747 |
IPR013178 | Histone_AcTrfase_Rtt109/CBP | Pfam | 1148 | 1364 |
IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 1051 | 1093 |
IPR000197 | Znf_TAZ | ProSiteProfiles | 661 | 742 |
IPR035898 | TAZ_dom_sf | Gene3D | 1603 | 1719 |
IPR043145 | Znf_ZZ_sf | Gene3D | 1545 | 1597 |
IPR035898 | TAZ_dom_sf | SUPERFAMILY | 1607 | 1690 |
IPR013178 | Histone_AcTrfase_Rtt109/CBP | SMART | 1141 | 1438 |
IPR013178 | Histone_AcTrfase_Rtt109/CBP | PANTHER | 132 | 1720 |
IPR000433 | Znf_ZZ | ProSiteProfiles | 1425 | 1472 |
IPR035898 | TAZ_dom_sf | Gene3D | 664 | 780 |
IPR000197 | Znf_TAZ | Pfam | 672 | 739 |
IPR000197 | Znf_TAZ | Pfam | 1615 | 1685 |
IPR043145 | Znf_ZZ_sf | Gene3D | 1422 | 1483 |
IPR000433 | Znf_ZZ | ProSiteProfiles | 1550 | 1592 |
IPR000433 | Znf_ZZ | ProSitePatterns | 1551 | 1578 |
No CAZYmes available for this sequence
No external refs found! |