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  5. Sevir.3G086200.1

Sevir.3G086200.1


Description : Cellulase (glycosyl hydrolase family 5) protein


Gene families : OG_01_0006236 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006236_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G086200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G086200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_113


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0007015 actin filament organization ISM GOs from InterProScan
MF GO:0051015 actin filament binding ISM GOs from InterProScan
BP GO:0071704 organic substance metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 70 546
IPR008999 Actin-crosslinking SUPERFAMILY 104 225
IPR010431 Fascin PANTHER 16 549
IPR001547 Glyco_hydro_5 Pfam 258 530

No CAZYmes available for this sequence

No external refs found!