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  5. Sevir.3G093000.1

Sevir.3G093000.1


Description : SLOW GROWTH 1


Gene families : OG_01_0012507 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012507_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G093000.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G093000.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_1


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002885 Pentatricopeptide_rpt Pfam 432 479
IPR002885 Pentatricopeptide_rpt Pfam 329 377
IPR002885 Pentatricopeptide_rpt TIGRFAM 434 468
IPR002885 Pentatricopeptide_rpt TIGRFAM 332 364
IPR002885 Pentatricopeptide_rpt TIGRFAM 301 330
IPR002885 Pentatricopeptide_rpt TIGRFAM 199 227
IPR002885 Pentatricopeptide_rpt Pfam 507 530
IPR002885 Pentatricopeptide_rpt Pfam 199 225
IPR002885 Pentatricopeptide_rpt Pfam 171 197
IPR002885 Pentatricopeptide_rpt Pfam 101 125
IPR011990 TPR-like_helical_dom_sf Gene3D 264 383
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 432 466
IPR011990 TPR-like_helical_dom_sf Gene3D 26 263
IPR011990 TPR-like_helical_dom_sf Gene3D 402 630
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 299 333
IPR002885 Pentatricopeptide_rpt Pfam 299 326
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 197 232
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 95 129
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 334 364

No CAZYmes available for this sequence

No external refs found!