Sevir.3G096800.1

Description : Aldolase-type TIM barrel family protein

Gene families : OG_01_0002468 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002468_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G096800.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G096800.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_108

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008676	3-deoxy-8-phosphooctulonate synthase activity	ISM	GOs from InterProScan
BP	GO:0009058	biosynthetic process	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013785	Aldolase_TIM	Gene3D	10	285
IPR006269	KDO8P_synthase	TIGRFAM	17	277
IPR006218	DAHP1/KDSA	Pfam	16	267
IPR006269	KDO8P_synthase	PANTHER	6	285
IPR006269	KDO8P_synthase	Hamap	12	279

No CAZYmes available for this sequence

External Links

No external refs found!