Sevir.3G119400.1

Description : SIN3-like 3

Gene families : OG_01_0007153 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007153_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G119400.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G119400.1	No neighbors in network
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003714	transcription corepressor activity	ISM	GOs from InterProScan
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036600	PAH_sf	Gene3D	91	163
IPR036600	PAH_sf	SUPERFAMILY	9	81
IPR013194	HDAC_interact_dom	SMART	434	534
IPR003822	PAH	ProSiteProfiles	93	163
IPR003822	PAH	ProSiteProfiles	8	82
IPR039774	Sin3-like	PANTHER	3	1348
IPR036600	PAH_sf	SUPERFAMILY	90	162
IPR036600	PAH_sf	Gene3D	18	80
IPR036600	PAH_sf	Gene3D	281	352
IPR031693	Sin3_C	Pfam	1070	1318
IPR003822	PAH	Pfam	116	160
IPR003822	PAH	Pfam	303	347
IPR003822	PAH	Pfam	35	79
IPR003822	PAH	ProSiteProfiles	282	350
IPR036600	PAH_sf	SUPERFAMILY	288	350
IPR013194	HDAC_interact_dom	Pfam	436	527

No CAZYmes available for this sequence

External Links

No external refs found!