Bradi4g38840.1

Description : Pectin lyase-like superfamily protein

Gene families : OG_01_0007833 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007833_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi4g38840.1
Cluster	Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_270

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	ISM	GOs from InterProScan
BP	GO:0042545	cell wall modification	ISM	GOs from InterProScan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000070	Pectinesterase_cat	Pfam	86	383
IPR012334	Pectin_lyas_fold	Gene3D	78	390
IPR011050	Pectin_lyase_fold/virulence	SUPERFAMILY	84	387
IPR033131	Pectinesterase_Asp_AS	ProSitePatterns	237	246

No CAZYmes available for this sequence

External Links

No external refs found!