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  5. Sevir.3G120100.1

Sevir.3G120100.1


Description : Argonaute family protein


Gene families : OG_01_0000282 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000282_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G120100.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G120100.1 No neighbors in network
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_57


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003165 Piwi SMART 564 871
IPR032474 Argonaute_N Pfam 57 217
IPR014811 ArgoL1 SMART 227 279
IPR045246 Piwi_ago-like CDD 439 865
IPR003165 Piwi Pfam 565 871
IPR032472 ArgoL2 Pfam 421 466
IPR003165 Piwi ProSiteProfiles 564 871
IPR003100 PAZ_dom ProSiteProfiles 304 395
IPR036085 PAZ_dom_sf SUPERFAMILY 274 435
IPR003100 PAZ_dom SMART 280 420
IPR003100 PAZ_dom Pfam 283 411
IPR036397 RNaseH_sf Gene3D 631 910
IPR014811 ArgoL1 Pfam 229 277
IPR012337 RNaseH-like_sf SUPERFAMILY 547 869

No CAZYmes available for this sequence

No external refs found!