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  5. Sevir.3G123000.1

Sevir.3G123000.1


Description : gamma vacuolar processing enzyme


Gene families : OG_01_0017720 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017720_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.3G123000.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.3G123000.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_327


Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008233 peptidase activity ISM GOs from InterProScan
BP GO:0051603 proteolysis involved in protein catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043577 AE PIRSF 5 473
IPR001096 Peptidase_C13 PRINTS 75 104
IPR001096 Peptidase_C13 PRINTS 50 74
IPR001096 Peptidase_C13 PRINTS 150 169
IPR001096 Peptidase_C13 PRINTS 199 215
IPR001096 Peptidase_C13 PRINTS 122 137
IPR001096 Peptidase_C13 PIRSF 5 473
IPR001096 Peptidase_C13 Pfam 49 320
IPR001096 Peptidase_C13 PANTHER 10 472

No CAZYmes available for this sequence

No external refs found!