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  5. Sevir.1G095400.1

Sevir.1G095400.1


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0003247 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003247_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G095400.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G095400.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_17


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011990 TPR-like_helical_dom_sf Gene3D 726 907
IPR011990 TPR-like_helical_dom_sf Gene3D 550 725
IPR002885 Pentatricopeptide_rpt ProSiteProfiles 551 585
IPR002885 Pentatricopeptide_rpt Pfam 519 547
IPR002885 Pentatricopeptide_rpt Pfam 657 683
IPR002885 Pentatricopeptide_rpt Pfam 622 642
IPR002885 Pentatricopeptide_rpt Pfam 552 594
IPR011990 TPR-like_helical_dom_sf Gene3D 357 547

No CAZYmes available for this sequence

No external refs found!