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  5. Bradi5g17760.1

Bradi5g17760.1


Description : expansin B2


Gene families : OG_01_0006010 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006010_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium distachyon coexpression network - v0.2 (X-meeting 2023): Bradi5g17760.1
Cluster Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_349


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036749 Expansin_CBD_sf Gene3D 159 262
IPR036749 Expansin_CBD_sf SUPERFAMILY 164 258
IPR007118 Expan_Lol_pI PRINTS 52 70
IPR007118 Expan_Lol_pI PRINTS 205 219
IPR007118 Expan_Lol_pI PRINTS 34 49
IPR007118 Expan_Lol_pI PRINTS 244 258
IPR007118 Expan_Lol_pI PRINTS 145 161
IPR007118 Expan_Lol_pI PRINTS 75 93
IPR007112 Expansin/allergen_DPBB_dom SMART 71 152
IPR036908 RlpA-like_sf SUPERFAMILY 29 161
IPR005795 LolPI PRINTS 166 181
IPR005795 LolPI PRINTS 73 84
IPR005795 LolPI PRINTS 134 149
IPR005795 LolPI PRINTS 182 197
IPR005795 LolPI PRINTS 234 251
IPR005795 LolPI PRINTS 214 231
IPR005795 LolPI PRINTS 93 103
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 53 162
IPR007117 Expansin_CBD Pfam 165 247
IPR007117 Expansin_CBD ProSiteProfiles 175 258
IPR036908 RlpA-like_sf Gene3D 20 158
IPR009009 RlpA-like_DPBB Pfam 72 152

No CAZYmes available for this sequence

No external refs found!